FC930385

Overview
NameFC930385
Unique NameFC930385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: Y2993_MYCBP (Uncharacterized oxidoreductase BCG_2993 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_2993 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.793e-16
Identity = 57/180 (31.67%), Postives = 81/180 (45.00%), Query Frame = 2
Query:  173 MKGRFASPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            M G   +  +    LN    +P +GLG  +   +    AV  AL +G R ID A+ YGNE  VG A+  +    + RE++F+T+ L        + +   R SL  LG+ Y+DLYL+HWP            PP          + +   AW  M      G  R+IGVSNF    I+ L
Sbjct:    1 MTGESGAAAAPSITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS---GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPA-----------PP----------VGKYVDAWGGMIQSRGEGHARSIGVSNFTAEHIENL 156          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: Y2971_MYCTU (Uncharacterized oxidoreductase Rv2971/MT3049 OS=Mycobacterium tuberculosis GN=Rv2971 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.793e-16
Identity = 57/180 (31.67%), Postives = 81/180 (45.00%), Query Frame = 2
Query:  173 MKGRFASPGSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            M G   +  +    LN    +P +GLG  +   +    AV  AL +G R ID A+ YGNE  VG A+  +    + RE++F+T+ L        + +   R SL  LG+ Y+DLYL+HWP            PP          + +   AW  M      G  R+IGVSNF    I+ L
Sbjct:    1 MTGESGAAAAPSITLNDEHTMPVLGLGVAELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAIAAS---GVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPA-----------PP----------VGKYVDAWGGMIQSRGEGHARSIGVSNFTAENIENL 156          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: Y2407_MYCS2 (Uncharacterized oxidoreductase MSMEG_2407 OS=Mycobacterium smegmatis GN=MSMEG_2407 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16
Identity = 48/166 (28.92%), Postives = 77/166 (46.39%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            LN    +P +G+G  +        +V  AL  GYR ID A  YGNE  VG A+  +    + R+++++T+ L          +   R SL+ LG+ Y+DLYL+HWP    S + D                     +W  +  + + G+ R+IGV NFG   ++ +
Sbjct:   16 LNDDNTLPVVGIGVGELSDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAAS---GIPRDEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVD---------------------SWGGLMKVKEDGIARSIGVCNFGAEDLETI 157          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DKGA_CORSC (2,5-diketo-D-gluconic acid reductase A OS=Corynebacterium sp. (strain ATCC 31090) GN=dkgA PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16
Identity = 55/167 (32.93%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  212 VLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            VLN G  IP +G G ++        AV+ AL VGYR+ID A +YGNE  VG A+  +    + R+D+F+T+ L+   +  ++    +  SL  L +  +DLYL+HWP  +A  +                       AW+ M  L  +GL R+IGVSN  V  ++ +
Sbjct:    7 VLNDGNSIPQLGYGVFKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS---GIARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNY---------------------VHAWEKMIELRAAGLTRSIGVSNHLVPHLERI 149          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: Y4483_MYCA1 (Uncharacterized oxidoreductase MAV_4483 OS=Mycobacterium avium (strain 104) GN=MAV_4483 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16
Identity = 56/161 (34.78%), Postives = 80/161 (49.69%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDS---GLVRAIGVSNF 688
            LN  AK+P +GLG  +   E    +V  AL  G R ID A  YGNE  VG A+  +    + RE++F+T+ L  S    +  +   + SL  LG+ YLDLYL+HWP                          +L K  ++ EG++++   G VR+IGVSNF
Sbjct:   19 LNDEAKMPVLGLGVAKLSDEETESSVLAALEAGCRLIDTAASYGNEAAVGRAIAAS---GIPREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWP------------------------APKLGKYVESFEGMIEARERGHVRSIGVSNF 152          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DKGB_ECO57 (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli O157:H7 GN=dkgB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.163e-15
Identity = 53/154 (34.42%), Postives = 84/154 (54.55%), Query Frame = 2
Query:  233 IPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGV 694
            IPA GLGT++   ++ + +VKTAL +GYR ID A +Y NE  VG A+ E+    + R ++++T+ ++    S +K+   ++ SL+ L   Y+DL L+HWP            P  +   E  +F+  L +A K        GL R IG+SNF +
Sbjct:    3 IPAFGLGTFRLKDDVVISSVKTALELGYRAIDTAQIYDNEAAVGLAIAES---GVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP-----------SPNDEVSVE--EFMQALLEAKK-------EGLTREIGISNFTI 133          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DKGB_ECOLI (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli (strain K12) GN=dkgB PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 52/154 (33.77%), Postives = 84/154 (54.55%), Query Frame = 2
Query:  233 IPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGV 694
            IPA GLGT++   ++ + +V TAL +GYR ID A +Y NE  VG+A+ E+    + R ++++T+ ++    S +K+   ++ SL+ L   Y+DL L+HWP            P  +   E  +F+  L +A K        GL R IG+SNF +
Sbjct:    3 IPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAAVGQAIAES---GVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP-----------SPNDEVSVE--EFMQALLEAKK-------QGLTREIGISNFTI 133          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: Y4149_MYCPA (Uncharacterized oxidoreductase MAP_4149 OS=Mycobacterium paratuberculosis GN=MAP_4149 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15
Identity = 56/161 (34.78%), Postives = 79/161 (49.07%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDS---GLVRAIGVSNF 688
            LN  AK P +GLG  +   E    +V  AL  G R ID A  YGNE  VG A+  +    + RE++F+T+ L  S    +  +   + SL  LG+ YLDLYL+HWP  +                        L K  ++ EG++++   G VR+IGVSNF
Sbjct:   19 LNDEAKKPVLGLGVAKLSDEETESSVLAALEAGCRLIDTAASYGNEAAVGRAIAAS---GIPREELFVTTKLGTSRQGFHSAQESCKESLDRLGLDYLDLYLIHWPAPT------------------------LGKYVESFEGMIEARERGHVRSIGVSNF 152          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: Y4205_MYCGI (Uncharacterized oxidoreductase Mflv_4205 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_4205 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15
Identity = 53/158 (33.54%), Postives = 76/158 (48.10%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNF 688
            LN    +P IGLG  +       +AV  AL  GYR ID A  YGNE  VG A+  +    + R+++F+T+ L          ++ +R SL+ LG+ Y+DLYL+HWP    S  G   D                  +W  +    + GL R+IGV+NF
Sbjct:   12 LNDDNTMPVIGLGVGELSDAETEQAVTAALEAGYRLIDTAAAYGNEAAVGRAIAAS---GVPRDELFVTTKLATEDAGFQSSQDALRASLERLGLDYVDLYLIHWP---VSQQGKHVD------------------SWGGLMKSKEVGLTRSIGVANF 145          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AKCL1_HUMAN (Aldo-keto reductase family 1 member C-like protein 1 OS=Homo sapiens GN=AKR1CL1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14
Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWP 532
            LN G  +P +G GT+    T      EA K A+ VG+R+ID A+LY NE EVG+A+ ++   G++KRE++F T  L+ +      +   +  SLK LG  Y+DL+++H P
Sbjct:   13 LNDGPFMPVLGFGTYAPDHTPKSQAAEATKVAIDVGFRHIDSAYLYQNEEEVGQAIWEKIADGTVKREEIFYTIKLWATFFRAELVHPALERSLKKLGPDYVDLFIIHVP 122          
The following BLAST results are available for this feature:
BLAST of FC930385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
Y2993_MYCBP1.793e-1631.67Uncharacterized oxidoreductase BCG_2993 OS=Mycobac... [more]
Y2971_MYCTU1.793e-1631.67Uncharacterized oxidoreductase Rv2971/MT3049 OS=My... [more]
Y2407_MYCS23.995e-1628.92Uncharacterized oxidoreductase MSMEG_2407 OS=Mycob... [more]
DKGA_CORSC5.218e-1632.932,5-diketo-D-gluconic acid reductase A OS=Coryneba... [more]
Y4483_MYCA18.901e-1634.78Uncharacterized oxidoreductase MAV_4483 OS=Mycobac... [more]
DKGB_ECO571.163e-1534.422,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
DKGB_ECOLI2.590e-1533.772,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
Y4149_MYCPA4.418e-1534.78Uncharacterized oxidoreductase MAP_4149 OS=Mycobac... [more]
Y4205_MYCGI5.769e-1533.54Uncharacterized oxidoreductase Mflv_4205 OS=Mycoba... [more]
AKCL1_HUMAN1.679e-1439.09Aldo-keto reductase family 1 member C-like protein... [more]

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Properties
Property NameValue
Genbank descriptionC34007A04EF PostHarvC1 Citrus clementina cDNA clone C34007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930385 ID=FC930385; Name=FC930385; organism=Citrus clementina; type=EST; length=713bp
GCTGCTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTT
TAATACTGTCAAAAGCTTTGAAGTGAAAAAAAAAATGCAAACTCTCGTCN
TGGGTTTTGTGATTTTTGGTTTGATTTGGTATCTGTGTTTTTGATCTTTT
TTTCTTTTTGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGA
GTAGTTACTTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTG
GGAACATGGCAAACTGGGGGAGAGCTTTGTGTTGAGGCTGTGAAAACAGC
ATTGTCAGTGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATG
AGATTGAAGTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAG
AGAGAGGATGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAAT
CAATAAGATTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTT
CATATTTGGATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGT
TTTGGGGATGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCA
GTTTTTAAATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTGG
ACTCGGGATTGGTCAGAGCTATTGGTGTCAGTAATTTTGGGGTTTCACAG
ATCAAAGAGTTGC
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