FC930385

Overview
NameFC930385
Unique NameFC930385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AKCL2_MACFA (1,5-anhydro-D-fructose reductase OS=Macaca fascicularis GN=AKR1E2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24
Identity = 67/177 (37.85%), Postives = 93/177 (52.54%), Query Frame = 2
Query:  233 IPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWP------------ECSASGF----GDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            IPA+GL  W+       EAVK A+  GYR+ +CA+ Y NE EVG  +    K G+++RED+F+ S L+C+ +  + ++   R SLK L ++YLDLYL+HWP             CS   F        D P                 W+AME LV +GLV+ IGVSNF   Q++ L
Sbjct:    4 IPAVGLSCWKASPGKVTEAVKVAIDAGYRHFNCAYFYHNEKEVGAGIRYKIKEGAVRREDLFIASKLWCTCHKKSLVKTACRRSLKALKLNYLDLYLIHWPMGFKPPHPEWIMSCSELSFCLSHPGVHDLPLDESDMVIPGDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERL 180          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1CN_HORSE (Aldo-keto reductase family 1 member C23 OS=Equus caballus GN=AKR1C23 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.978e-23
Identity = 67/168 (39.88%), Postives = 99/168 (58.93%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            LN G  I A+G GT+   +      VEA K+A+  G+R+IDCAHLY NE EVG A+    + G++KRED+F TS L+ +   +  +   +  SLKNL + Y+DLY++H+P   A   G+   P  + G      ++ L   W+AME   D+GL ++IGVSNF   Q++
Sbjct:   10 LNDGHFIHALGFGTYAPNEVPKSKAVEATKSAIDAGFRHIDCAHLYDNEKEVGLAIRSKIQDGTVKREDIFCTSKLWATSLRLQLVRPALEKSLKNLQLDYVDLYIIHFP--VAVKPGEEHLPQDEQGRMIFDTVD-LCATWEAMEKCKDAGLTKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23
Identity = 61/168 (36.31%), Postives = 87/168 (51.79%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPP----SKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQI 703
            LN+G  +P +G G W+    +C + V  A+  GYR  D A  YGNE E GE +  A K G +KRED+F+ S L+ + +  +K+E   R  L +  + Y DL+L+H+P            PP          R      L++ W AME LVD GL R+IGVSN+    +
Sbjct:    8 LNSGYDMPQVGFGLWKVDNAVCADTVYNAIKAGYRLFDGACDYGNEKECGEGVARAIKDGLVKREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVHFPAALEYVDPSVRYPPGWFYDGKSEVRWSKTTTLQQTWGAMERLVDKGLARSIGVSNYQAQSV 175          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23
Identity = 65/177 (36.72%), Postives = 102/177 (57.63%), Query Frame = 2
Query:  194 PGSSYFVLNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            P S    LN G  IP +G GT+   +      +EA K A+ VG+R++D AHLY NE +VG+A+  +   G++KRED+F TS L+C+      +   +  SL+NL + Y+DLY++H P       G+   P  +SG      ++ L   W+A+E   D+GL ++IGVSNF   Q++++
Sbjct:    3 PKSQRVKLNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKP--GNKFVPKDESGKLIFDSVD-LCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKI 176          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23
Identity = 64/168 (38.10%), Postives = 98/168 (58.33%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            LN G  +P +G GT+   +      +EA K A+  G+R+ID AHLY NE +VG A+  +   GS+KRED+F TS L+C+ +    +   +  SLKNL + Y+DLYL+H+P       G+   P  ++G      ++ L   W+A+E   D+GL ++IGVSNF   Q++
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKP--GEEVIPKDENGKILFDTVD-LCATWEAVEKCKDAGLAKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: XYL2_CANTR (NADPH-dependent D-xylose reductase II,III OS=Candida tropicalis GN=xyrB PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23
Identity = 59/170 (34.71%), Postives = 96/170 (56.47%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR---LKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            LN+G ++P +G G W+   E   + +  A+  GYR  D A  YGNE EVGE ++ A K G +KRE++F+TS L+ + +    +E  +  +L +L + Y+DL+L+H+P        +   PP     +   F      L   WKA+E LV++G +++IG+SNF  + I +L
Sbjct:   12 LNSGYEMPLVGFGCWKVNNETAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLDTWKALEKLVEAGKIKSIGISNFTGALIYDL 181          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AKC1H_MOUSE (Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23
Identity = 64/168 (38.10%), Postives = 99/168 (58.93%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGEL---CVEAVKTALSVGYRNIDCAHLYGNEIEVGEA-LDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            LN G  IP +G GT+ T   L    +E+ K A+ VG+ +IDC+HLY NE E+G+A L +   G++KRED+F TS L+ + +    +   +  SL+ L + Y+DLYL+H+P       G+   P  + G+     ++ L   W+AME   D+GL ++IGVSNF   Q++
Sbjct:   10 LNDGHSIPVLGFGTYATEEHLKKKSMESTKIAIDVGFCHIDCSHLYQNEEEIGQAILSKIEDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKP--GNELLPKDEHGNLIFDTVD-LCDTWEAMEKCKDAGLAKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23
Identity = 64/168 (38.10%), Postives = 97/168 (57.74%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            LN    +P +G GT+   +      +EA K A+  G+R+ID AHLY NE +VG A+  +   GS+KRED+F TS L+C+ +    +   +  SLKNL + Y+DLYL+H+P       G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF   Q++
Sbjct:   10 LNDSHFMPVLGFGTYAPPEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLVHFPVSVKP--GEEVIPKDENGKILFDTVD-LCATWEAMEKCKDAGLAKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFU (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22
Identity = 64/168 (38.10%), Postives = 97/168 (57.74%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            LN G  +P +G GT+   +      +EA K A+  G+R+ID AHLY NE  VG A+  +   G++KRED+F TS L+C+ +    +   +  SLKNL + Y+DLYL+H+P       G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF   Q++
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKNKAIEATKLAIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVKREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKP--GEELIPKDENGKLLFDTVD-LCATWEAMEKCKDAGLAKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22
Identity = 58/176 (32.95%), Postives = 98/176 (55.68%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWP---------ECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            LN G K+P +GLG W+   ++C + +  A+ +GYR  D A  Y NE EVG+ ++ A K G +KRED+ + S L+ S +  + +   +  +L +L + Y+D++ +H+P         E    GF    +  +K   E  Q    L   W+A+E LVD G ++++G+SNF  + I++L
Sbjct:   10 LNNGEKMPLVGLGCWKMPNDVCADQIYEAIKIGYRLFDGAQDYANEKEVGQGVNRAIKEGLVKREDLVVVSKLWNSFHHPDNVPRALERTLSDLQLDYVDIFYIHFPLAFKPVPFDEKYPPGFYTGKEDEAKGHIEEEQV--PLLDTWRALEKLVDQGKIKSLGISNFSGALIQDL 183          
The following BLAST results are available for this feature:
BLAST of FC930385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
AKCL2_MACFA3.986e-2437.851,5-anhydro-D-fructose reductase OS=Macaca fascicu... [more]
AK1CN_HORSE1.978e-2339.88Aldo-keto reductase family 1 member C23 OS=Equus c... [more]
XYL1_TRIRE5.756e-2336.31NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
PGFS1_BOVIN5.756e-2336.72Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
AK1C1_HUMAN5.756e-2338.10Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
XYL2_CANTR9.818e-2334.71NADPH-dependent D-xylose reductase II,III OS=Candi... [more]
AKC1H_MOUSE9.818e-2338.10Aldo-keto reductase family 1 member C18 OS=Mus mus... [more]
AK1C1_PONAB9.818e-2338.10Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C1_MACFU1.282e-2238.10Aldo-keto reductase family 1 member C1 homolog OS=... [more]
XYL1_KLULA1.675e-2232.95NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]

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Properties
Property NameValue
Genbank descriptionC34007A04EF PostHarvC1 Citrus clementina cDNA clone C34007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930385 ID=FC930385; Name=FC930385; organism=Citrus clementina; type=EST; length=713bp
GCTGCTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTT
TAATACTGTCAAAAGCTTTGAAGTGAAAAAAAAAATGCAAACTCTCGTCN
TGGGTTTTGTGATTTTTGGTTTGATTTGGTATCTGTGTTTTTGATCTTTT
TTTCTTTTTGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGA
GTAGTTACTTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTG
GGAACATGGCAAACTGGGGGAGAGCTTTGTGTTGAGGCTGTGAAAACAGC
ATTGTCAGTGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATG
AGATTGAAGTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAG
AGAGAGGATGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAAT
CAATAAGATTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTT
CATATTTGGATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGT
TTTGGGGATGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCA
GTTTTTAAATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTGG
ACTCGGGATTGGTCAGAGCTATTGGTGTCAGTAATTTTGGGGTTTCACAG
ATCAAAGAGTTGC
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