FC930385

Overview
NameFC930385
Unique NameFC930385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: XYL1_CANTE (NAD(P)H-dependent D-xylose reductase OS=Candida tenuis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20
Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR---LKKAWKAMEGLVDSGLVRAIGVSNF 688
            L++G  +P+IG G W+       E V  A+  GYR  D A  YGNE EVG+ +  A  +G +KRE++FLTS L+ + +    +E  +  +L +L V Y+DL+L+H+P        +   PP     +   F+     + + WKA+E LV +G +++IGVSNF
Sbjct:   10 LSSGHLMPSIGFGCWKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNF 171          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20
Identity = 65/177 (36.72%), Postives = 97/177 (54.80%), Query Frame = 2
Query:  191 SPGSSYFVLNTGAKIPAIGLGTWQ----TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            S  S    L+ G  IP IGLGT+     T    C  +VK A+  GYR+ID A++Y NE EVGEA+ E   +G ++RED+F    L+ + +    +   +  +L+ L + Y+DLY++  P   A   GD   P  ++G       N L   W+AME   D+GLV+++GVSNF   Q++
Sbjct:    4 SAASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVP--MAFKPGDEIYPRDENGKWLYHKSN-LCATWEAMEACKDAGLVKSLGVSNFNRRQLE 177          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1C3_PONAB (Aldo-keto reductase family 1 member C3 homolog OS=Pongo abelii GN=AKR1C3 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            LN G  +P +G GT+   +      +E  K A+  G+R+ID AHLY NE +VG A+  +   GS+KRED+F TS L+ + +    +   +  SLK   + Y+DLYL+H P       G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF   Q++
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKP--GEELSPTDENGKVIFDIVD-LCTTWEAMEECKDAGLAKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1C3_HUMAN (Aldo-keto reductase family 1 member C3 OS=Homo sapiens GN=AKR1C3 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            LN G  +P +G GT+   +      +E  K A+  G+R+ID AHLY NE +VG A+  +   GS+KRED+F TS L+ + +    +   +  SLK   + Y+DLYL+H P       G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF   Q++
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKP--GEELSPTDENGKVIFDIVD-LCTTWEAMEKCKDAGLAKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 63/163 (38.65%), Postives = 79/163 (48.47%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNF 688
            S    LN G  IP +GLG WQT  E    AV  AL  GYR+ID A  Y NE E G A+  +    + RED+FL + L+ S    +        S++ LGV YLDLYL+HWP    + F D                      +KA   L D G +R+IGVSNF
Sbjct:    2 SPRITLNDGNSIPQVGLGVWQTPAEDTERAVAAALQAGYRHIDTAAAYRNETETGRAIANS---GVPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWPVPENNKFVD---------------------TFKAFAHLRDQGRIRSIGVSNF 140          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: XYL1_PICST (NAD(P)H-dependent D-xylose reductase OS=Pichia stipitis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR---LKKAWKAMEGLVDSGLVRAIGVSNF 688
            LN+G  +PA+G G W+   + C E +  A+  GYR  D A  Y NE  VG  + +A  +G +KRED+FLTS L+ + +  + +E  +  +L +L V Y+DL+L+H+P        +   PP     +   F      + + WKA+E LV +G +R+IGVSNF
Sbjct:    6 LNSGYDMPAVGFGCWKVDVDTCSEQIYRAIKTGYRLFDGAEDYANEKLVGAGVKKAIDEGIVKREDLFLTSKLWNNYHHPDNVEKALNRTLSDLQVDYVDLFLIHFPVTFKFVPLEEKYPPGFYCGKGDNFDYEDVPILETWKALEKLVKAGKIRSIGVSNF 167          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DHB5_MOUSE (Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus GN=Akr1c6 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 61/170 (35.88%), Postives = 98/170 (57.65%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            L+ G  IP +G GT+   +       EA K A+  G+R+ID A +Y NE EVG A+  +   G++KRED+F TS ++C+ +    +   +  SLK L + Y+DLYL+H+P   A   G+   P  ++G      ++ +   W+AME   D+GL ++IGVSNF   Q++++
Sbjct:   10 LSDGHFIPILGFGTYAPQEVPKSKATEATKIAIDAGFRHIDSASMYQNEKEVGLAIRSKIADGTVKREDIFYTSKVWCTFHRPELVRVCLEQSLKQLQLDYVDLYLIHFP--MAMKPGENYLPKDENGKLIYDAVD-ICDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKI 176          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1CO_HORSE (Aldo-keto reductase family 1 member C23-like protein OS=Equus caballus GN=PGFS PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.674e-20
Identity = 62/168 (36.90%), Postives = 94/168 (55.95%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            LN G  IP +G GT+   +      VE  K A+  G+R+ID A+ Y NE EVG+A+    + G++KRED+F TS L+ +      +   +  SL NL + Y+DLY++H+P   A   G+   P  + G      ++ L   W+AME   D+GL ++IGVSNF   Q++
Sbjct:   10 LNDGHVIPVLGFGTYAPEEVPKSRTVEVTKLAIDAGFRHIDSAYSYNNEKEVGQAIRSKIEDGTVKREDIFYTSKLWLTFLRPELVRPALEKSLTNLQLDYVDLYIIHFP--IALKPGEELFPEDEHGKLIFDTVD-LCATWEAMEKCKDAGLAKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.492e-20
Identity = 63/165 (38.18%), Postives = 87/165 (52.73%), Query Frame = 2
Query:  233 IPAIGLGTWQ---TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSL--KREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +P IG+GT     T  E    A+  A+ +GYR+ D A LY  E  V EA+ EA +  L   R DVF+TS L+CS     ++    R +L+NLG+ Y+DL L+HWP   A G  D   P      E       ++  W+ ME     GL RAIGVSNF   ++++L
Sbjct:   18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATVAPGSYDFPFP-----KEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQL 177          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20
Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            L  G  +P +GLG W+   E  + A+  AL VGYR+ID A  Y NE  VG+AL  A   S+ RE++F+T+ L+   +   +    ++ SLK L + YLDLYLMHWP  +   + D                     AWK M  L   GLV++IGV NF +  ++ L
Sbjct:    9 LQDGNVMPQLGLGVWKASNEEVIAAIHKALEVGYRSIDTATAYQNEEGVGKALKAA---SVAREELFITTKLW--NDDQKRPREALQESLKKLQLDYLDLYLMHWPVPAIDHYVD---------------------AWKGMIALQKEGLVKSIGVCNFQIHHLQRL 148          
The following BLAST results are available for this feature:
BLAST of FC930385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
XYL1_CANTE1.200e-2035.80NAD(P)H-dependent D-xylose reductase OS=Candida te... [more]
AK1D1_HUMAN1.200e-2036.723-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
AK1C3_PONAB1.200e-2036.31Aldo-keto reductase family 1 member C3 homolog OS=... [more]
AK1C3_HUMAN1.200e-2036.31Aldo-keto reductase family 1 member C3 OS=Homo sap... [more]
Y2408_MYCS21.568e-2038.65Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]
XYL1_PICST1.568e-2036.42NAD(P)H-dependent D-xylose reductase OS=Pichia sti... [more]
DHB5_MOUSE1.568e-2035.88Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus ... [more]
AK1CO_HORSE2.674e-2036.90Aldo-keto reductase family 1 member C23-like prote... [more]
NADO2_ORYSJ3.492e-2038.18Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
DKGA_SALTY4.561e-2036.752,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]

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Properties
Property NameValue
Genbank descriptionC34007A04EF PostHarvC1 Citrus clementina cDNA clone C34007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930385 ID=FC930385; Name=FC930385; organism=Citrus clementina; type=EST; length=713bp
GCTGCTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTT
TAATACTGTCAAAAGCTTTGAAGTGAAAAAAAAAATGCAAACTCTCGTCN
TGGGTTTTGTGATTTTTGGTTTGATTTGGTATCTGTGTTTTTGATCTTTT
TTTCTTTTTGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGA
GTAGTTACTTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTG
GGAACATGGCAAACTGGGGGAGAGCTTTGTGTTGAGGCTGTGAAAACAGC
ATTGTCAGTGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATG
AGATTGAAGTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAG
AGAGAGGATGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAAT
CAATAAGATTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTT
CATATTTGGATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGT
TTTGGGGATGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCA
GTTTTTAAATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTGG
ACTCGGGATTGGTCAGAGCTATTGGTGTCAGTAATTTTGGGGTTTCACAG
ATCAAAGAGTTGC
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