FC930385

Overview
NameFC930385
Unique NameFC930385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20
Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            L  G  +P +GLG W+   E  + A+  AL VGYR+ID A  Y NE  VG+AL  A   S+ RE++F+T+ L+   +   +    ++ SLK L + YLDLYLMHWP  +   + D                     AWK M  L   GLV++IGV NF +  ++ L
Sbjct:    9 LQDGNVMPQLGLGVWKASNEEVIAAIHKALEVGYRSIDTATAYQNEEGVGKALKAA---SVAREELFITTKLW--NDDQKRPREALQESLKKLQLDYLDLYLMHWPVPAIDHYVD---------------------AWKGMIALQKEGLVKSIGVCNFQIHHLQRL 148          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DKGA_ECO57 (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli O157:H7 GN=dkgA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20
Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            L  G  +P +GLG WQ   E  + A++ AL VGYR+ D A  Y NE  VG+AL  A   S+ RE++F+T+ L+   +  N+    +  SLK L + Y+DLYLMHWP  +                     ++   +AWK M  L   GL+++IGV NF +  ++ L
Sbjct:    9 LQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSFDTAAAYKNEEGVGKALKNA---SVNREELFITTKLW--NDDHNRPREALLDSLKKLQLDYIDLYLMHWPVPA---------------------IDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRL 148          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1D1_RABIT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagus cuniculus GN=AKR1D1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20
Identity = 63/171 (36.84%), Postives = 93/171 (54.39%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQ----TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            L  G  IP IGLGT+     T    C  +VK A+  GYR+ID A++Y NE EVGE   E   +G ++RED+F    L+ + +    +   +  +LK L + Y+DLY++  P   A   GD   P  ++G       N L   W+A+E   D+GLV+++GVSNF   Q++ L
Sbjct:   12 LGDGNSIPIIGLGTYSEPKTTPKGSCATSVKIAIDTGYRHIDGAYIYQNEHEVGETFREKIAEGKVRREDIFYCGKLWATNHDPVMVRPTLERTLKVLKLDYIDLYIIEIP--MAFKPGDVVYPRDENGKWLYHKTN-LCATWEALEACKDAGLVKSLGVSNFNRQQLELL 179          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: YJ66_YEAST (Uncharacterized oxidoreductase YJR096W OS=Saccharomyces cerevisiae GN=YJR096W PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20
Identity = 62/173 (35.84%), Postives = 91/173 (52.60%), Query Frame = 2
Query:  206 YFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK---GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNL-GVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            ++ L+ G KIP+I LGT+        E V   +  GYR+ D A LYGNE EVG+ + +      G+ KRE++F T+ L+ S N   + +  +R  L  + G+ Y+DL L+H P                 GS+ R       + W+AM+  VD GLV++IGVSN+G   I EL
Sbjct:    5 FYKLSNGFKIPSIALGTYDIPRSQTAEIVYEGVKCGYRHFDTAVLYGNEKEVGDGIIKWLNEDPGNHKREEIFYTTKLWNSQNGYKRAKAAIRQCLNEVSGLQYIDLLLIHSP---------------LEGSKLR------LETWRAMQEAVDEGLVKSIGVSNYGKKHIDEL 156          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20
Identity = 62/172 (36.05%), Postives = 83/172 (48.26%), Query Frame = 2
Query:  197 GSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            G+    LN G  IP +GLG WQT  E    AV  AL+ GYR++D A  YGNE + G A+ ++    L R  V+L + L+ S    +        S+  LGV YLDLYL+HWP             P K         N     +KA   L + G +R+IGVSNF    ++ L
Sbjct:    2 GAPLVALNDGNSIPQVGLGVWQTPPEDTERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQS---GLDRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWP------------VPEK---------NLFVDTFKAFARLREDGRIRSIGVSNFEPEHLRVL 149          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20
Identity = 63/177 (35.59%), Postives = 101/177 (57.06%), Query Frame = 2
Query:  191 SPGSSYFVLNTGAKIPAIGLGTWQ----TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            S  + +  LN G  IP IGLGT+       G+  + AVKTA+  GYR+ID A++Y NE EVGEA+ ++  +G +KRE++F    L+ + +    +   +  +L+ L + Y+DLY++  P   A   G+   P  ++G       N L   W+A+E   D+GLV+++GVSNF   Q++
Sbjct:    4 STANHHIPLNDGNSIPIIGLGTYSDPRPVPGKTFI-AVKTAIDEGYRHIDGAYVYRNEHEVGEAIREKVAEGKVKREEIFYCGKLWSTDHDPEMVRPALERTLQTLKLDYIDLYIIEMP--MAFKPGEEFYPKDENGRVIYHKSN-LCATWEALEACKDAGLVKSLGVSNFNRRQLE 176          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DKGA_ECOLI (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli (strain K12) GN=dkgA PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.016e-19
Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            L  G  +P +GLG WQ   E  + A++ AL VGYR+ID A  Y NE  VG+AL  A   S+ RE++F+T+ L+   +   +    +  SLK L + Y+DLYLMHWP  +                     ++   +AWK M  L   GL+++IGV NF +  ++ L
Sbjct:    9 LQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNA---SVNREELFITTKLW--NDDHKRPREALLDSLKKLQLDYIDLYLMHWPVPA---------------------IDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRL 148          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.327e-19
Identity = 61/170 (35.88%), Postives = 90/170 (52.94%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGG---ELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            LN G  IP +G GT            E  K A+  G+ + D A +Y  E  VGEA+ E    G+ +RED+F TS L+C+      + + +  SLK L + Y+DLYL+H+P   A   GD   P  + G      ++ L   W+AME   D+GL ++IGVSNF   Q++++
Sbjct:   10 LNDGHFIPVLGFGTAMPSELPKSKAKEVTKIAIDAGFHHFDSAFVYNTEDHVGEAIREKIANGTTRREDIFYTSKLWCTSLHPELVRSSLECSLKKLQLDYVDLYLIHFP--MALKPGDENFPVDEHGKLLFDTVD-LCATWEAMEKCKDAGLAKSIGVSNFNRRQLEKI 176          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19
Identity = 61/172 (35.47%), Postives = 83/172 (48.26%), Query Frame = 2
Query:  197 GSSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            G+    LN G  IP +GLG WQT  E    AV  AL+ GYR++D A  YGNE + G A+ ++    L R  V+L + L+ S    +        S+  LGV YLDLYL+HWP             P K         N     ++A   L + G +R+IGVSNF    ++ L
Sbjct:    2 GAPLVALNDGNSIPQVGLGVWQTPPEDTERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQS---GLDRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWP------------VPEK---------NLFVDTFRAFARLREDGRIRSIGVSNFEPEHLRVL 149          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: I3ACR_SCHPO (NAD/NADP-dependent indole-3-acetaldehyde reductase OS=Schizosaccharomyces pombe GN=SPAC19G12.09 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19
Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 2
Query:  233 IPAIGLGTW---QTGGEL---CVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +PA G+GT    +  GE+    V++VK AL+ G+ +IDCA +YGNE EVG AL EA   ++ R  +F+TS +   M++++ I   +  SL+ LG  YLDLYL+H P      F +   P              + + WKAME  + +GLV ++GVSNF +  ++EL
Sbjct:   12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALKEA---NVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSP----IPFYEKKIP--------------ISEGWKAMETALGTGLVHSVGVSNFRIPDLEEL 153          
The following BLAST results are available for this feature:
BLAST of FC930385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
DKGA_SALTI4.561e-2036.75Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]
DKGA_ECO575.957e-2035.542,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
AK1D1_RABIT5.957e-2036.843-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagu... [more]
YJ66_YEAST7.780e-2035.84Uncharacterized oxidoreductase YJR096W OS=Saccharo... [more]
Y1985_MYCSK7.780e-2036.05Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
AK1D1_RAT7.780e-2035.593-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
DKGA_ECOLI1.016e-1935.542,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
AK1CL_RAT1.327e-1935.88Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
Y1919_MYCSJ1.733e-1935.47Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
I3ACR_SCHPO1.733e-1937.95NAD/NADP-dependent indole-3-acetaldehyde reductase... [more]

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Properties
Property NameValue
Genbank descriptionC34007A04EF PostHarvC1 Citrus clementina cDNA clone C34007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930385 ID=FC930385; Name=FC930385; organism=Citrus clementina; type=EST; length=713bp
GCTGCTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTT
TAATACTGTCAAAAGCTTTGAAGTGAAAAAAAAAATGCAAACTCTCGTCN
TGGGTTTTGTGATTTTTGGTTTGATTTGGTATCTGTGTTTTTGATCTTTT
TTTCTTTTTGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGA
GTAGTTACTTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTG
GGAACATGGCAAACTGGGGGAGAGCTTTGTGTTGAGGCTGTGAAAACAGC
ATTGTCAGTGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATG
AGATTGAAGTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAG
AGAGAGGATGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAAT
CAATAAGATTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTT
CATATTTGGATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGT
TTTGGGGATGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCA
GTTTTTAAATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTGG
ACTCGGGATTGGTCAGAGCTATTGGTGTCAGTAATTTTGGGGTTTCACAG
ATCAAAGAGTTGC
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