FC930385

Overview
NameFC930385
Unique NameFC930385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19
Identity = 58/170 (34.12%), Postives = 97/170 (57.06%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            LN G  IP +G GT    +   +  ++A K A+  G+R+ D A+LY  E EVG+A+    + G++KRED+F TS L+ + +    +   +  +LK+  + Y+DLY++H+P   A   GD   P  + G    + ++ +   W+AME   D+GL ++IGVSNF   Q++ +
Sbjct:   10 LNDGNFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFP--MALQPGDIFFPRDEHGKLLFETVD-ICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERI 176          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19
Identity = 57/168 (33.93%), Postives = 92/168 (54.76%), Query Frame = 2
Query:  224 GAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGD-ATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            G  IPA+G GT+   +      +EA   A+ VGYR+ID A+ Y  E E+G+A+    K G +KRED+F+T+ L+C+      +   +      L + ++DL++MH+P    +G  D   D   K   +   F       W+A+E   D+GLV++IGVSNF + Q++ +
Sbjct:   13 GHCIPALGFGTYKPIEVPKSKAMEAANLAIGVGYRHIDTAYAYQIEEEIGQAIQSNIKAGIVKREDMFITTKLWCTCFQPELVRPSLEKXXXKLQLEHVDLFIMHYPVPMKAGDNDFPLDEQGKLLLDTVDFC----ATWEALEKXXDAGLVKSIGVSNFNMRQLERI 176          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.601e-19
Identity = 61/170 (35.88%), Postives = 88/170 (51.76%), Query Frame = 2
Query:  233 IPAIGLGTWQ---TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSL--KREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDP-----PSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +P +G+GT     T  E    A+  A+ +GYR+ D A +Y  E  VGEA+ EA +  L   R DVF+TS ++CS     ++    R +L+NLG+ Y+DL L+HWP     G  D   P     PS            ++  W+ ME     GL RAIGVSNF   ++++L
Sbjct:   16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFD----------MEGVWRGMEECHRLGLARAIGVSNFSAKKLEQL 175          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 8.601e-19
Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            LN G K+PA+GLG +    E    A+ +A+S GYR ID A  Y NE +VGE +  +    + R ++F+T+ L+       +       SL  LG+ Y+DLYL+HWP                      +  N   ++WKA E ++  G  RAIGV NF   Q+ EL
Sbjct:   10 LNNGVKMPALGLGVFAASAEETASAIASAISSGYRLIDTARSYNNEAQVGEGIRNS---GVDRAEMFVTTKLFNCDYGYERALRAFDESLGRLGLDYVDLYLLHWP---------------------TKDWNATIQSWKAAEKILGDGRARAIGVCNFLEDQLDEL 151          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18
Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 2
Query:  230 KIPAIGLGTWQ--TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASG-FGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            ++P +G+G+    T  +   EA+  A+  GYR+ D A  YG+E  +GEAL EA   G + R+D+F+TS L+ + N  + +   +R SLK L + YLDLYL+HWP  S  G F    +       +       +K  W++ME     GL +AIGVSNF V +++ L
Sbjct:   20 RMPVVGMGSAPDFTCKKDTKEAIIEAVKQGYRHFDTAAAYGSEQALGEALKEAIHLGLVSRQDLFVTSKLWVTENHPHLVLPALRKSLKTLQLEYLDLYLIHWPLSSQPGKFSFPIEVEDLLPFD-------VKGVWESMEECQKLGLTKAIGVSNFSVKKLQNL 177          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: YKW2_SCHPO (Uncharacterized oxidoreductase P32A8.02 OS=Schizosaccharomyces pombe GN=SPAP32A8.02 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.916e-18
Identity = 63/172 (36.63%), Postives = 91/172 (52.91%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            S+   L  G  IP IG G +      C   V  AL  GYR+ID A +YGNE   G+A+ D   K ++KR D+FLTS L  + +        +R SL +LG +Y+DL+L+  P                +G ++ +  +     WKAME  VDSG +R++GVSN+GV  ++EL
Sbjct:    8 STTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKL-ANCSDYYSTRAAIRSSLHHLG-TYIDLFLIQSP----------------AGGKKSRIAS-----WKAMEEFVDSGDIRSVGVSNYGVKHLQEL 156          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: YER5_SCHPO (Uncharacterized oxidoreductase C2F3.05c OS=Schizosaccharomyces pombe GN=SPAC2F3.05c PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.916e-18
Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 2
Query:  203 SYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            S+  LN G K P    G++      C ++V  AL  GYR+ID A +Y NE + G A+ +  + +  KRED++ TS L   ++      + +  S+K  G+ Y+DL+L+H P      +GD  +                  +WKA+E  V+ G +RAIGVSNFG   I+EL
Sbjct:    4 SFVKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTSKLN-DLSGYKSTLSSIDASVKACGLGYIDLFLLHSP------YGDRIE------------------SWKALEKGVEEGKLRAIGVSNFGPHHIQEL 149          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18
Identity = 64/169 (37.87%), Postives = 97/169 (57.40%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQ----TGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            L+ G  IP IGLGT+       G+  V AVKTA+  GYR+ID A++Y NE EVGEA+ E   +G +KRE++F    L+ + +  + +   +  +LK L + Y+DLY++  P   A   G    P  ++G       N L   W+A+E   D+GLV+++GVSNF   Q++
Sbjct:   12 LSDGNNIPLIGLGTYSDPRPVPGKTYV-AVKTAIDEGYRHIDGAYVYHNEHEVGEAIREKIAEGKVKREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELP--MAFKPGKEIYPRDENGRIIYDKTN-LCATWEALEACKDAGLVKSLGVSNFNRRQLE 176          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17
Identity = 57/167 (34.13%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQT-GGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            L+ G ++P  GLG ++   G    E+VK A+  GYR+ID A +Y NE  VG  + E+    + RE++F+TS ++               SL+ L + YLDLYL+HWP                         ++ K  W+A+E L   G +RAIGVSNF V  ++EL
Sbjct:   11 LHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GVAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPG-----------------------KDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEEL 151          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.119e-17
Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = 2
Query:  212 VLNTGAKIPAIGLGT---WQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR--LKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            +LN G  IP +G GT    +       E  K A+  G+ + D A +Y  E  VGEA+  +   G+++RED+F TS ++C+      +   +  SL+ L   Y+DLYL+H+P   A   G+   P  + G   +   +R  L   W+AME   D+GL ++IGVSNF   Q++
Sbjct:    9 ILNDGNFIPVLGFGTALPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYP--MALKPGEENFPVDEHG---KLIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLE 174          
The following BLAST results are available for this feature:
BLAST of FC930385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
DIDH_RAT2.956e-1934.123-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
AK1CD_MESAU6.586e-1933.93Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]
NADO1_ORYSJ8.601e-1935.88Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
MORA_PSEPU8.601e-1934.34Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]
6DCS_SOYBN1.467e-1836.97NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
YKW2_SCHPO1.916e-1836.63Uncharacterized oxidoreductase P32A8.02 OS=Schizos... [more]
YER5_SCHPO1.916e-1833.92Uncharacterized oxidoreductase C2F3.05c OS=Schizos... [more]
AK1D1_MOUSE2.503e-1837.873-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]
GR_BACSU1.242e-1734.13Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
AK1CL_MOUSE2.119e-1733.92Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionC34007A04EF PostHarvC1 Citrus clementina cDNA clone C34007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930385 ID=FC930385; Name=FC930385; organism=Citrus clementina; type=EST; length=713bp
GCTGCTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTT
TAATACTGTCAAAAGCTTTGAAGTGAAAAAAAAAATGCAAACTCTCGTCN
TGGGTTTTGTGATTTTTGGTTTGATTTGGTATCTGTGTTTTTGATCTTTT
TTTCTTTTTGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGA
GTAGTTACTTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTG
GGAACATGGCAAACTGGGGGAGAGCTTTGTGTTGAGGCTGTGAAAACAGC
ATTGTCAGTGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATG
AGATTGAAGTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAG
AGAGAGGATGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAAT
CAATAAGATTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTT
CATATTTGGATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGT
TTTGGGGATGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCA
GTTTTTAAATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTGG
ACTCGGGATTGGTCAGAGCTATTGGTGTCAGTAATTTTGGGGTTTCACAG
ATCAAAGAGTTGC
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