FC930387

Overview
NameFC930387
Unique NameFC930387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: ATK3_ARATH (Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.896e-16
Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSER---GADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKG 421
            G T  NE+SSRSH +  L I   +  +ES   ++ G L+ IDLAGSER      T D  K+T+     INKSL +L + I AL   + H+PFR SKLT +L+    G+++T+M   I+P S     +L +LR+A RV +   G
Sbjct:  601 GKTQMNEQSSRSHFVFTLRI---SGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQA----INKSLSSLGDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDAKTLMFVNIAPESSSTGESLCSLRFAARVNACEIG 736          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: ATK2_ARATH (Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.896e-16
Identity = 58/143 (40.56%), Postives = 81/143 (56.64%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSER---GADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKG 421
            G T  NE+SSRSH +  L I   +  +ES   ++ G L+ IDLAGSER      T D  K+T+     INKSL +L + I AL   + H+PFR SKLT +L+    G+S+T+M   I+P       +L +LR+A RV +   G
Sbjct:  592 GKTAMNEQSSRSHFVFTLKI---SGFNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQA----INKSLSSLGDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNITPEPSSTGESLCSLRFAARVNACEIG 727          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: ARK2_ORYSJ (Armadillo repeat-containing kinesin-like protein 2 OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.476e-16
Identity = 55/151 (36.42%), Postives = 76/151 (50.33%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVG--------------------KLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADR 400
            T  N ESSRSHA+L + ++R+  G       + G                    KL  +DLAGSER  D + ++  T  E   IN SL AL +CI AL  +  H+P R SKLT +L+DSF G +RT ++  I PS      T +T+ +  R
Sbjct:  247 TKLNTESSRSHALLMVNVRRAVKGKHEMDVSISGENGHSSSMVGSLRPPIVRKSKLVVVDLAGSER-IDKSGSEGHTLEEAKSINLSLSALGKCINALAENSPHVPVRDSKLTRLLKDSFGGTARTSLVVTIGPSPRHRGETTSTIMFGQR 396          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: TEA2_SCHPO (Kinesin-like protein tea2 OS=Schizosaccharomyces pombe GN=tea2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.223e-16
Identity = 63/172 (36.63%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIR--------ALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSAL 499
            T  N  SSRSHAILQ+ + R+   + +     +  LS +DLAGSER +       + R EGA INKSLL L   I         +L ++ GHIP+R SKLT +L+ S  G S+  +++ IS  S     T NTL++A R ++L     P+    +  +   ++  A L SAL
Sbjct:  325 TDFNTYSSRSHAILQVFLIRNNPTAHTSQ---ISSLSLVDLAGSERASA----HHERRKEGAFINKSLLTLGTVISRLSAAANPSLTSNSGHIPYRESKLTRLLQQSLSGQSQISLLATISIESNHTMETTNTLKFASRAQNL-----PQDIRQAEAVTNVQAELASLHSAL 484          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KLP3_CAEEL (Kinesin-like protein klp-3 OS=Caenorhabditis elegans GN=klp-3 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.223e-16
Identity = 52/132 (39.39%), Postives = 80/132 (60.61%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRV 403
            T AN ESSRSH I+++ +  SA    +K    VG+L+ +DLAGSER + T     Q   E   INKSL  L   + AL  +Q HIPFR  +LT +L DS  G+S+T++I  +SP +     +++++ +A+++
Sbjct:  435 TEANIESSRSHVIVRVLV--SATNLITKATT-VGRLNLVDLAGSERVSQTNATG-QLLKEAQAINKSLSELGNVVLALRQNQKHIPFRNCQLTRILEDSLNGDSKTLVIVHLSPDAKSLNESISSVNFAEKI 562          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIFC1_HUMAN (Kinesin-like protein KIFC1 OS=Homo sapiens GN=KIFC1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.408e-16
Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAI--KRSADGSESKPPRLVGKLSFIDLAGSER---GADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRV 403
            T  NE SSRSH++ QL I  + S+ G +   P     LS +DLAGSER   G      +++   E   IN SL  L   I AL N + H+P+R SKLT +L++S  G+++ +M   ISP       +LN+LR+A +V
Sbjct:  529 TAQNERSSRSHSVFQLQISGEHSSRGLQCGAP-----LSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKV 660          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: CUT7_SCHPO (Kinesin-like protein cut7 OS=Schizosaccharomyces pombe GN=cut7 PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 58/158 (36.71%), Postives = 81/158 (51.27%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADG------------SESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDIL 445
            T  N+ SSRSH+I  + + R                + S       KL  +DLAGSE    +   +K+ R  G  IN+SLL L   I AL     HIP+R SKLT +L+DS  G ++T MI  +S ++   E T++TL YA R KS+   N P+ + L
Sbjct:  276 TKCNDLSSRSHSIFTITLHRKVSSGMTDETNSLTINNNSDDLLRASKLHMVDLAGSENIGRSGAENKRARETGM-INQSLLTLGRVINALVEKAHHIPYRESKLTRLLQDSLGGKTKTSMIVTVSSTNTNLEETISTLEYAARAKSIR--NKPQNNQL 430          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIFC1_CRIGR (Kinesin-like protein KIFC1 OS=Cricetulus griseus PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15
Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAI--KRSADGSESKPPRLVGKLSFIDLAGSER---GADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRV 403
            T  NE SSRSH++ QL I  + +A G +   P     L+ +DLAGSER   G      ++    E   IN SL  L   I AL N + H+P+R SKLT +L++S  G+++ +M   ISP       +LN+LR+A +V
Sbjct:  478 TAQNERSSRSHSVFQLQISGEHAARGLQCVAP-----LNLVDLAGSERLDPGLTLGPGERDRLRETQSINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKV 609          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KI20B_MOUSE (Kinesin-like protein KIF20B OS=Mus musculus GN=Kif20b PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15
Identity = 53/133 (39.85%), Postives = 70/133 (52.63%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQG----HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYA 394
            T  N  SSRSH+I  + I +  D    +  R V +LS  DLAGSER   T +  ++ R E   IN SLL L +CI  L N +     H+PFR SKLT   +  F G  +  MI  IS S    + TLN L+++
Sbjct:  341 TKLNNASSRSHSIFTIRILQIEDSEIPRVTR-VSELSLCDLAGSERSMKTQNEGERLR-EAGNINTSLLTLGKCINVLKNSEKSKVQHVPFRESKLTHYFQSFFTGKGKICMIINISQSCSAYDETLNVLKFS 471          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KF22A_XENLA (Kinesin-like protein KIF22-A OS=Xenopus laevis GN=kif22-A PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15
Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            +T  N+ SSRSHA+L + +++S      +  +L GKL  IDLAGSE    T +   + +  GA IN SL  L + + AL+     IP+R SKLT +L+DS  G++ +VMI+ I+P       TL  L +A + K +
Sbjct:  227 STKLNDRSSRSHAVLLIKVQKSQQVVPFR--QLTGKLYLIDLAGSEDNRRTGNQGIRLKESGA-INSSLFTLSKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSVMITNIAPEQTYYFDTLTALNFAAKSKQI 359          
The following BLAST results are available for this feature:
BLAST of FC930387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
ATK3_ARATH1.896e-1640.56Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=... [more]
ATK2_ARATH1.896e-1640.56Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=... [more]
ARK2_ORYSJ2.476e-1636.42Armadillo repeat-containing kinesin-like protein 2... [more]
TEA2_SCHPO4.223e-1636.63Kinesin-like protein tea2 OS=Schizosaccharomyces p... [more]
KLP3_CAEEL4.223e-1639.39Kinesin-like protein klp-3 OS=Caenorhabditis elega... [more]
KIFC1_HUMAN9.408e-1639.42Kinesin-like protein KIFC1 OS=Homo sapiens GN=KIFC... [more]
CUT7_SCHPO1.229e-1536.71Kinesin-like protein cut7 OS=Schizosaccharomyces p... [more]
KIFC1_CRIGR2.096e-1538.69Kinesin-like protein KIFC1 OS=Cricetulus griseus P... [more]
KI20B_MOUSE2.096e-1539.85Kinesin-like protein KIF20B OS=Mus musculus GN=Kif... [more]
KF22A_XENLA2.096e-1538.24Kinesin-like protein KIF22-A OS=Xenopus laevis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34007A06EF PostHarvC1 Citrus clementina cDNA clone C34007A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930387 ID=FC930387; Name=FC930387; organism=Citrus clementina; type=EST; length=734bp
GGGTACAACTGGTGCTAATGAGGAATCCTCCCGTTCACATGCCATACTTC
AGCTTGCTATCAAGAGGTCAGCTGATGGTAGTGAATCAAAGCCTCCTCGA
CTTGTTGGCAAGCTCTCTTTTATAGATCTTGCTGGAAGTGAACGTGGTGC
TGATACTACAGACAACGATAAACAGACAAGAATGGAAGGAGCAGAGATAA
ATAAGAGCTTGCTTGCACTAAAGGAATGCATAAGAGCTCTTGACAATGAT
CAGGGTCACATTCCTTTCAGAGGCAGTAAATTAACTGAGGTTCTGAGGGA
TTCATTTGTTGGCAATTCACGCACGGTTATGATATCATGCATTTCACCAA
GCTCAGGGTGTTGTGAACACACTCTCAACACATTAAGATATGCCGACAGA
GTGAAGAGTCTTTCAAAAGGGAACAATCCTAAAAAGGACATACTGTCTTC
AACCATAAATTTGAAGGAGTCAACTACTGCACCCTTATCTTCAGCTCTAC
CAACAACATCCCCTTATGAGGATGACACTGATGCATGGCCTGAACAAAAT
GAAAGAGATGATTTTGACGCATCAGAGGATTCCTATGAACCAGAGAAGCC
GGTATGGATGAAAAGTGGGAAGCTAGAGCAATTCAATCTCCCTTCTGCAC
AGGATCAATTACGAAAACCACCCAATGGTCAGACAAGGTGGAAGGAGCAG
CCAAAATCTGGGTTTTAAGAATTTCAATTCAGAT
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