FC930387

Overview
NameFC930387
Unique NameFC930387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF22_RAT (Kinesin-like protein KIF22 OS=Rattus norvegicus GN=Kif22 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 60/191 (31.41%), Postives = 98/191 (51.31%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVK---------------SLSKGNNPKKDILSSTINLK------ESTTAPLSSALPTTS 511
            G T  N+ SSRSHA+L + +++    +  +     GKL  IDLAGSE    T +   + +  GA IN SL  L + + AL+     IP+R SKLT +L+DS  G++ +++I+ I+P     + T++ L +  R K               +L+    P+K++L  +   K      EST +P S+A P ++
Sbjct:  227 GATRLNQRSSRSHAVLLVKVEQRERLTPFRQRE--GKLYLIDLAGSEDNRRTGNQGIRLKESGA-INTSLFVLGKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYQDTISALNFTARSKEVINRPFTNESLQPHALAPVKLPQKELLGPSEAKKAKGPEEESTGSPESTAAPASA 414          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF9_MOUSE (Kinesin-like protein KIF9 OS=Mus musculus GN=Kif9 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 49/131 (37.40%), Postives = 77/131 (58.78%), Query Frame = 2
Query:   17 NEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVK 406
            N+ SSRSH I  + ++  +  + S    +  K++ +DLAGSER    T ++ +   E   INKSL  L++ I AL D ++ H+PFR SKLT  L+DS  GN   V+++ I   +   + TL++LR+  R+K
Sbjct:  210 NKNSSRSHCIFTIYMEAHSR-TLSDEKYITSKINLVDLAGSER-LSKTGSEGRVLKEATYINKSLSFLEQAIIALGDQNRDHVPFRQSKLTHALKDSLGGNCNMVLVTNIYGEAAQLDETLSSLRFDSRMK 338          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIFC2_MOUSE (Kinesin-like protein KIFC2 OS=Mus musculus GN=Kifc2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.026e-14
Identity = 58/179 (32.40%), Postives = 89/179 (49.72%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSER--------GADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPL--SSALPTTSP 514
            T  N+ SSRSHA++ L ++ +   S  +P  + G L  +DLAGSER              N  +   E   IN+SLLAL   + AL   + H+PFR S+LT +L+ +    +  V++  IS  +     T+ +L++A+RV  +  G   ++    S      ST  PL  +S  PT SP
Sbjct:  593 TVMNQHSSRSHALVTLTLRAA---SPPRPQGITGTLHLVDLAGSERVWKAGVASPVQRDPNGARRLREAQAINRSLLALGGVMAALRARRPHVPFRDSQLTRLLQPALWAGTTAVLLLQISTRAEDLGETICSLKFAERVGQVELGPARRRRAPRSGTPSSLSTDTPLTGTSCTPTPSP 768          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF23_HUMAN (Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF23 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.026e-14
Identity = 51/160 (31.87%), Postives = 82/160 (51.25%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRS---ADGS---ESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGH-----IPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSST 454
            T  N ESSRSH++  + + ++   ADG    + K    + +LS +DLAGSER   T     + R E   IN+SL+ L+ C+  L  +Q +     +P+R SKLT + ++ F G  +  MI C++P +   E  L  +R+A+  + +       K I   T
Sbjct:  292 THLNRESSRSHSVFNIKLVQAPLDADGDNVLQEKEQITISQLSLVDLAGSERTNRTRAEGNRLR-EAGNINQSLMTLRTCMDVLRENQMYGTNKMVPYRDSKLTHLFKNYFDGEGKVRMIVCVNPKAEDYEENLQVMRFAEVTQEVEVARPVDKAICGLT 450          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF22_BOVIN (Kinesin-like protein KIF22 OS=Bos taurus GN=KIF22 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14
Identity = 58/183 (31.69%), Postives = 93/183 (50.82%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPP--RLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSK---GNNPKKDILSSTINLKESTTAPLSSALPTTSPYEDDTDA 535
            G T  N+ SSRSHA+L + +    D  E   P  +  GKL  IDLAGSE    T +   + +  GA IN SL  L + + AL+     +P+R SKLT +L+DS  G++ +++I+ I+P       T++ L +A R K +      N   +  + + + L +      S A     P E++T++
Sbjct:  230 GATRLNQRSSRSHAVLLVKV----DQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGA-INTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQLPVLAPVKLSQKELLGPSEAKRARGPEEEETES 407          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KI20B_HUMAN (Kinesin-like protein KIF20B OS=Homo sapiens GN=KIF20B PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14
Identity = 54/134 (40.30%), Postives = 70/134 (52.24%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDND-----QGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYA 394
            T  N  SSRSH+I  + I +  D   S+  R V +LS  DLAGSER   T +  ++ R  G  IN SLL L +CI  L N      Q H+PFR SKLT   +  F G  +  MI  IS      + TLN L+++
Sbjct:  342 TKLNNASSRSHSIFTVKILQIEDSEMSRVIR-VSELSLCDLAGSERTMKTQNEGERLRETG-NINTSLLTLGKCINVLKNSEKSKFQQHVPFRESKLTHYFQSFFNGKGKICMIVNISQCYLAYDETLNVLKFS 473          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: CENPE_HUMAN (Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14
Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSES--KPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQ--GHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVK 406
            G T  N+ SSRSH I ++ ++    G  S  +    V  L+ +DLAGSER A T     + + EG  IN+SL  L + I+ L + Q  G I +R SKLT +L++S  GN++T +I  I+P S   + TL  L++A   K
Sbjct:  192 GETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLK-EGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPVS--FDETLTALQFASTAK 327          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF22_MOUSE (Kinesin-like protein KIF22 OS=Mus musculus GN=Kif22 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPP--RLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSK---GNNPKKDILSSTINLKESTTAPLSSALPTTSPYEDDT 529
            G T  N+ SSRSHA+L + +    D  E   P  +  GKL  IDLAGSE    T +   + +  GA IN SL  L + + AL+     IP+R SKLT +L+DS  G++ +++I+ I+P     + T++ L +  R K +      N   +    + + L +      S A     P E+ T
Sbjct:  230 GATRLNQRSSRSHAVLLVKV----DQRERLTPFRQREGKLYLIDLAGSEDNRRTGNQGIRLKESGA-INTSLFVLGKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYQDTISALNFTARSKEVINRPFTNESLQPHALAPVKLSQKELLGPSEAKKAKGPEEEST 405          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KLP2_SCHPO (Kinesin-like protein 2 OS=Schizosaccharomyces pombe GN=klp2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.150e-13
Identity = 57/145 (39.31%), Postives = 80/145 (55.17%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLV-GKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQG--HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPK 433
            T ANE SSRSH++  L +    +GS S         L+ IDLAGSER + +    ++ + E   INKSL  L + I AL + +   +IP+R SKLT +L+ S  GNS+T+M   ISP       TL +LR+A +V +   G   K
Sbjct:  675 TNANEHSSRSHSVFMLHL----NGSNSTTGETCRSTLNLIDLAGSERLSSSQSVGERLK-ETQAINKSLSCLGDVIHALGSGKEGTYIPYRNSKLTNLLQYSLGGNSKTLMFVNISPLKQHVPETLCSLRFATKVNNTQIGTARK 814          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIP2_ASHGO (Kinesin-like protein KIP2 OS=Ashbya gossypii GN=KIP2 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13
Identity = 59/152 (38.82%), Postives = 73/152 (48.03%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRS--ADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDN------------DQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLS 415
            G T  N  SSRSHAI+ L + R     GSE+        LS  DLAGSER           R EGA INKSLLAL   I  L                GHIP+R SKLT +L+ +  G+S    I  I   +     T NT+R+A R K+++
Sbjct:  305 GETDFNTRSSRSHAIVLLRLTRYDLKTGSEA-----TSTLSLCDLAGSERAVTQIVR----RKEGAFINKSLLALGTVIAKLSMLGSQANGLQPSPAAGHIPYRDSKLTRILQPALTGDSIITTICTIDSKAESSTETTNTVRFASRAKNIA 447          
The following BLAST results are available for this feature:
BLAST of FC930387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIF22_RAT1.774e-1431.41Kinesin-like protein KIF22 OS=Rattus norvegicus GN... [more]
KIF9_MOUSE2.317e-1437.40Kinesin-like protein KIF9 OS=Mus musculus GN=Kif9 ... [more]
KIFC2_MOUSE3.026e-1432.40Kinesin-like protein KIFC2 OS=Mus musculus GN=Kifc... [more]
KIF23_HUMAN3.026e-1431.88Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF2... [more]
KIF22_BOVIN5.162e-1431.69Kinesin-like protein KIF22 OS=Bos taurus GN=KIF22 ... [more]
KI20B_HUMAN5.162e-1440.30Kinesin-like protein KIF20B OS=Homo sapiens GN=KIF... [more]
CENPE_HUMAN5.162e-1438.13Centromere-associated protein E OS=Homo sapiens GN... [more]
KIF22_MOUSE6.742e-1432.04Kinesin-like protein KIF22 OS=Mus musculus GN=Kif2... [more]
KLP2_SCHPO1.150e-1339.31Kinesin-like protein 2 OS=Schizosaccharomyces pomb... [more]
KIP2_ASHGO1.502e-1338.82Kinesin-like protein KIP2 OS=Ashbya gossypii GN=KI... [more]

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Properties
Property NameValue
Genbank descriptionC34007A06EF PostHarvC1 Citrus clementina cDNA clone C34007A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930387 ID=FC930387; Name=FC930387; organism=Citrus clementina; type=EST; length=734bp
GGGTACAACTGGTGCTAATGAGGAATCCTCCCGTTCACATGCCATACTTC
AGCTTGCTATCAAGAGGTCAGCTGATGGTAGTGAATCAAAGCCTCCTCGA
CTTGTTGGCAAGCTCTCTTTTATAGATCTTGCTGGAAGTGAACGTGGTGC
TGATACTACAGACAACGATAAACAGACAAGAATGGAAGGAGCAGAGATAA
ATAAGAGCTTGCTTGCACTAAAGGAATGCATAAGAGCTCTTGACAATGAT
CAGGGTCACATTCCTTTCAGAGGCAGTAAATTAACTGAGGTTCTGAGGGA
TTCATTTGTTGGCAATTCACGCACGGTTATGATATCATGCATTTCACCAA
GCTCAGGGTGTTGTGAACACACTCTCAACACATTAAGATATGCCGACAGA
GTGAAGAGTCTTTCAAAAGGGAACAATCCTAAAAAGGACATACTGTCTTC
AACCATAAATTTGAAGGAGTCAACTACTGCACCCTTATCTTCAGCTCTAC
CAACAACATCCCCTTATGAGGATGACACTGATGCATGGCCTGAACAAAAT
GAAAGAGATGATTTTGACGCATCAGAGGATTCCTATGAACCAGAGAAGCC
GGTATGGATGAAAAGTGGGAAGCTAGAGCAATTCAATCTCCCTTCTGCAC
AGGATCAATTACGAAAACCACCCAATGGTCAGACAAGGTGGAAGGAGCAG
CCAAAATCTGGGTTTTAAGAATTTCAATTCAGAT
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