FC930387

Overview
NameFC930387
Unique NameFC930387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14940 contig Ccv1_Contig14940:130..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF22_HUMAN (Kinesin-like protein KIF22 OS=Homo sapiens GN=KIF22 PE=1 SV=5)

HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13
Identity = 51/139 (36.69%), Postives = 77/139 (55.40%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPP--RLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            G T  N+ SSRSHA+L + +    D  E   P  +  GKL  IDLAGSE    T +   + +  GA IN SL  L + + AL+     +P+R SKLT +L+DS  G++ +++I+ I+P       T++ L +A R K +
Sbjct:  235 GATRLNQRSSRSHAVLLVKV----DQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGA-INTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEV 368          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: NOD_DROME (Kinesin-like protein Nod OS=Drosophila melanogaster GN=nod PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSALPTTS 511
            T  N  SSRSHAI+ + +K     S         +++ +DLAGSE G   T ++   R EG  IN  LL++ + + ++      IP+R S LT VL+ S    S    ++CISP       TL+TLR+    K L    NP + +     +L   TT     AL T++
Sbjct:  196 TNMNSNSSRSHAIVTIHVKSKTHHS---------RMNIVDLAGSE-GVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRL--NPMQ-VARQKQSLAARTTHVFRQALCTST 350          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF22_PONAB (Kinesin-like protein KIF22 OS=Pongo abelii GN=KIF22 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13
Identity = 51/139 (36.69%), Postives = 77/139 (55.40%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPP--RLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            G T  N+ SSRSHA+L + +    D  E   P  +  GKL  IDLAGSE    T +   + +  GA IN SL  L + + AL+     +P+R SKLT +L+DS  G++ +++I+ I+P       T++ L +A R K +
Sbjct:  235 GATRLNQRSSRSHAVLLVKV----DQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGA-INTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERCFYLDTVSALNFAARSKEV 368          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF6_HUMAN (Kinesin-like protein KIF6 OS=Homo sapiens GN=KIF6 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRV 403
            T  N+ S+RSH I  + +     GS +       KL  +DLAGSER A T         E   IN SL  L++ I AL +  + HIP+R S +T VLRDS  GN  T MI+ +S      + +++T R+A RV
Sbjct:  214 TPMNQASTRSHCIFTIHLSSKEPGSATVRH---AKLHLVDLAGSERVAKTGVGG-HLLTEAKYINLSLHYLEQVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDESISTCRFAQRV 342          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KI20A_HUMAN (Kinesin-like protein KIF20A OS=Homo sapiens GN=KIF20A PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12
Identity = 47/136 (34.56%), Postives = 69/136 (50.74%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGH------IPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYA 394
            +T  N+ SSRSH+I  + I       +  P   + +LS  DLAGSER  D    ++    E   IN SL  L  CI AL  +Q +      +PFR SKLT V +  F G  R+ MI  ++P +   + TL+  +++
Sbjct:  370 STHLNQNSSRSHSIFSIRILHLQGEGDIVPK--ISELSLCDLAGSERCKDQKSGERLK--EAGNINTSLHTLGRCIAALRQNQQNRSKQNLVPFRDSKLTRVFQGFFTGRGRSCMIVNVNPCASTYDETLHVAKFS 501          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KI20A_BOVIN (Kinesin-like protein KIF20A OS=Bos taurus GN=KIF20A PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.832e-12
Identity = 47/136 (34.56%), Postives = 69/136 (50.74%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGH------IPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYA 394
            +T  N+ SSRSH+I  + I       +  P   + +LS  DLAGSER  D    ++    E   IN SL  L  CI AL  +Q +      +PFR SKLT V +  F G  R+ MI  ++P +   + TL+  +++
Sbjct:  369 STHLNQNSSRSHSIFSIRILHLQGEGDIIPK--ISELSLCDLAGSERCKDQKSGERLK--EAGNINTSLHTLGRCIAALRQNQQNRSKQNLVPFRDSKLTRVFQGFFTGRGRSCMIVNVNPCASTYDETLHVAKFS 500          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIP2_YEAST (Kinesin-like protein KIP2 OS=Saccharomyces cerevisiae GN=KIP2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12
Identity = 59/184 (32.07%), Postives = 81/184 (44.02%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQ-------------------------------GHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTIN 460
            G T  N  SSRSHAI+ +   R    +          LS  DLAGSER        ++ R EG+ INKSLLAL   I  L  D+                                HIP+R SKLT +L+ +  G+S    I  +   +     T+NTLR+A R K+++  +  KK I+S+  N
Sbjct:  333 GETDYNARSSRSHAIVLI---RLTSTNVKNGTSRSSTLSLCDLAGSERAT----GQQERRKEGSFINKSLLALGTVISKLSADKMNSVGSNIPSPSASGSSSSSGNATNNGTSPSNHIPYRDSKLTRLLQPALSGDSIVTTICTVDTRNDAAAETMNTLRFASRAKNVAL-HVSKKSIISNGNN 508          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KI20A_MOUSE (Kinesin-like protein KIF20A OS=Mus musculus GN=Kif20a PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11
Identity = 47/136 (34.56%), Postives = 69/136 (50.74%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGH------IPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYA 394
            +T  N++SSRSH+I  + I       +  P   + +LS  DLAGSER       ++    E   IN SL  L  CI AL  +Q +      IPFR SKLT V +  F G  R+ MI  ++P +   + TL+  +++
Sbjct:  369 STHMNQQSSRSHSIFSIRILHLQGEGDIVPK--ISELSLCDLAGSERCKHQKSGERLK--EAGNINTSLHTLGRCIAALRQNQQNRSKQNLIPFRDSKLTRVFQGFFTGRGRSCMIVNVNPCASTYDETLHAAKFS 500          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF9_DICDI (Kinesin-related protein 9 OS=Dictyostelium discoideum GN=kif9 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSS--GCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLK 466
            T  N  SSRSHAI  +++ +  +  E+K   +   L  +DLAGSE  A   D       E   INKSL AL   I  +  +  H+ +R SKLT++L+  F GNS+T +I   S S+       T+ +L +  R +S+   N P +++  S   LK
Sbjct:  587 TKKNMASSRSHAIFIVSLLK--EDLENKMT-VTSLLYLVDLAGSE-SASKIDGTTSKIEETKSINKSLYALGGVIEDMSKNSKHVRYRDSKLTQLLQQCFGGNSKTCLIVNCSSSNHESVIRETIQSLNFGQRAQSVK--NKPLQNVEESHSELK 735          
The following BLAST results are available for this feature:
BLAST of FC930387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIF22_HUMAN1.502e-1336.69Kinesin-like protein KIF22 OS=Homo sapiens GN=KIF2... [more]
NOD_DROME1.962e-1332.74Kinesin-like protein Nod OS=Drosophila melanogaste... [more]
KIF22_PONAB1.962e-1336.69Kinesin-like protein KIF22 OS=Pongo abelii GN=KIF2... [more]
KIF6_HUMAN1.661e-1238.35Kinesin-like protein KIF6 OS=Homo sapiens GN=KIF6 ... [more]
KI20A_HUMAN3.699e-1234.56Kinesin-like protein KIF20A OS=Homo sapiens GN=KIF... [more]
KI20A_BOVIN4.832e-1234.56Kinesin-like protein KIF20A OS=Bos taurus GN=KIF20... [more]
KIP2_YEAST6.310e-1232.07Kinesin-like protein KIP2 OS=Saccharomyces cerevis... [more]
KI20A_MOUSE1.076e-1134.56Kinesin-like protein KIF20A OS=Mus musculus GN=Kif... [more]
KIF9_DICDI4.090e-1134.19Kinesin-related protein 9 OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionC34007A06EF PostHarvC1 Citrus clementina cDNA clone C34007A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930387 ID=FC930387; Name=FC930387; organism=Citrus clementina; type=EST; length=734bp
GGGTACAACTGGTGCTAATGAGGAATCCTCCCGTTCACATGCCATACTTC
AGCTTGCTATCAAGAGGTCAGCTGATGGTAGTGAATCAAAGCCTCCTCGA
CTTGTTGGCAAGCTCTCTTTTATAGATCTTGCTGGAAGTGAACGTGGTGC
TGATACTACAGACAACGATAAACAGACAAGAATGGAAGGAGCAGAGATAA
ATAAGAGCTTGCTTGCACTAAAGGAATGCATAAGAGCTCTTGACAATGAT
CAGGGTCACATTCCTTTCAGAGGCAGTAAATTAACTGAGGTTCTGAGGGA
TTCATTTGTTGGCAATTCACGCACGGTTATGATATCATGCATTTCACCAA
GCTCAGGGTGTTGTGAACACACTCTCAACACATTAAGATATGCCGACAGA
GTGAAGAGTCTTTCAAAAGGGAACAATCCTAAAAAGGACATACTGTCTTC
AACCATAAATTTGAAGGAGTCAACTACTGCACCCTTATCTTCAGCTCTAC
CAACAACATCCCCTTATGAGGATGACACTGATGCATGGCCTGAACAAAAT
GAAAGAGATGATTTTGACGCATCAGAGGATTCCTATGAACCAGAGAAGCC
GGTATGGATGAAAAGTGGGAAGCTAGAGCAATTCAATCTCCCTTCTGCAC
AGGATCAATTACGAAAACCACCCAATGGTCAGACAAGGTGGAAGGAGCAG
CCAAAATCTGGGTTTTAAGAATTTCAATTCAGAT
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