FC930387

Overview
NameFC930387
Unique NameFC930387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14940 contig Ccv1_Contig14940:130..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF3C_MOUSE (Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3c PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21
Identity = 77/251 (30.68%), Postives = 116/251 (46.22%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSER-------------------------GADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLS------------------------KGNNPKKDILSSTINLKESTTAPLSSALPTTSPYEDDTDAWPEQNERDDFDASEDSYEPEKPV 604
            G+T  NE SSRSHAI  + ++ S  GS+ +    VGKL+ +DLAGSER                          A  + +  +   E ++IN SL AL   I AL  N   HIP+R SKLT +L+DS  GN++T+M++ + P+S   + +L+TLR+A+R K++                         K    KK +L      K S      SA P   P     +AW  + E    D + +++ P +P+
Sbjct:  205 GSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNAAGGPATQPTAGGGSGSGSASGSASSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVNEDPKDTLLREFQEEIARLKAQLEKKGMLGKRPRRKSSRRKKAVSA-PAGYPEGSVIEAWVAEEE----DDNNNNHHPPQPI 450          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF3C_PONAB (Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3C PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.269e-20
Identity = 67/175 (38.29%), Postives = 97/175 (55.43%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSER----------GADTTDNDK-------------QTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLS---KGNNPKKDIL 445
            G+T  NE SSRSHAI  + ++ S  GS+ +    VGKL+ +DLAGSER          GA T  +               +   E ++IN SL AL   I AL  N   HIP+R SKLT +L+DS  GN++T+M++ + P+S   + +L+TLR+A+R K++    + N   KD L
Sbjct:  205 GSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGASTPSSGGSGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVNEDPKDTL 379          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KL61_DROME (Bipolar kinesin KRP-130 OS=Drosophila melanogaster GN=Klp61F PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 61/158 (38.61%), Postives = 89/158 (56.33%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRM-EGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKEST 475
            TT  N +SSRSH +  + +    +G E +    +GKL+ +DLAGSE       N+K  R+ E   IN+SLL L   I AL +   H+P+R SKLT +L++S  G ++T +I+ ISP     E TL+TL YA R K++       + +   T+ LKE T
Sbjct:  221 TTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSE-NVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTV-LKEYT 376          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF7_DANRE (Kinesin-like protein kif7 OS=Danio rerio GN=kif7 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPR---LVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQG---HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            G T  N  SSRSH I  + +++   GS +       L  K  F+DLAGSER   T +  ++ + E  +IN  LL L   I AL + +    HIP+R SK+T +L+DS  GN++T+MI+CISPSS   + +LNTL YA R +++
Sbjct:  206 GATQMNPHSSRSHTIFTVLMEQRRGGSRAANGSVQILSSKFHFVDLAGSERILKTGNTGERLK-ESIQINSGLLVLGNVIGALGDPKRKGTHIPYRDSKITRILKDSLGGNAKTLMIACISPSSSDFDESLNTLNYAKRARNI 347          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF3C_HUMAN (Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3C PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 67/175 (38.29%), Postives = 97/175 (55.43%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSER----------GADTTDNDK-------------QTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLS---KGNNPKKDIL 445
            G+T  NE SSRSHAI  + ++ S  GS+ +    VGKL+ +DLAGSER          GA T  +               +   E ++IN SL AL   I AL  N   HIP+R SKLT +L+DS  GN++T+M++ + P+S   + +L+TLR+A+R K++    + N   KD L
Sbjct:  205 GSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGAATPSSGGGGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVNEDPKDTL 379          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KI21A_MOUSE (Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 71/186 (38.17%), Postives = 96/186 (51.61%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAI-----------KRSADG---SESKPPR----LVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQG---HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSAL 499
            +T  N +SSRSHAI  + +           + + D    SES P      L  K  F+DLAGSER   T    ++ + EG  IN  LLAL   I AL +      H+P+R SKLT +L+DS  GNS+T+MI+C+SPS      TLNTL+YA+R +++       +D  S  IN   S    L   L
Sbjct:  216 STQMNVQSSRSHAIFTIHVCQTRVCPQTDAENATDNKLISESSPMNEFETLTAKFHFVDLAGSERLKRTGATGERAK-EGISINCGLLALGNVISALGDKSKRATHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVMVNQDRASQQINALRSEITRLQMEL 400          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF5_DICDI (Kinesin-related protein 5 OS=Dictyostelium discoideum GN=kif5 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.826e-20
Identity = 74/201 (36.82%), Postives = 111/201 (55.22%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIK-RSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSALPTTSPYEDDTDAWPEQNERDDFDASEDSYEPEKPV 604
            T  N+ SSRSH+IL +AI+ +S+DGS+ +     GKL+ +DLAGSE+    T  +     +  +IN+SL  L  CI AL D+ + HIPFR SKLT +L+DS  GN++T ++   SP     + T++TL++  R KS+   NN K +   S   L+    A L+  L     Y         +N  + F +S  SY+P  P+
Sbjct:  200 TNMNQRSSRSHSILIIAIEQKSSDGSKKR-----GKLNLVDLAGSEK-VSKTGAEGIVLEQAKKINQSLSLLGNCIHALTDSKREHIPFRDSKLTRLLQDSLGGNTKTTLLVTASPHFNNVDETISTLKFGARAKSIK--NNVKVNQEKSAAELQIIVNA-LTKELSILKVYSISL-----ENLVNYFKSS--SYQPGNPI 384          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF1C_MOUSE (Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1c PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20
Identity = 64/142 (45.07%), Postives = 83/142 (58.45%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAI-KRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGH------IPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            T  NE SSRSHA+  +   +RS D         V K+S +DLAGSER AD++        EGA INKSL  L + I AL + Q        IP+R S LT +L+++  GNSRT MI+ +SP+    E TL+TLRYADR K +
Sbjct:  208 TNMNETSSRSHAVFTIVFTQRSHDQLTGLDSEKVSKISLVDLAGSER-ADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQI 348          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF1A_AEDAE (Kinesin-like protein unc-104 OS=Aedes aegypti GN=unc-104 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.074e-19
Identity = 64/145 (44.14%), Postives = 81/145 (55.86%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAI-KRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL---------DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            T  NE SSRSHA+  +   +R  D   S     V K+S +DLAGSER AD+T        EGA INKSL  L + I AL               IP+R S LT +LR++  GNS+T MI+ ISP+    + TL+TLRYADR K +
Sbjct:  208 TNMNETSSRSHAVFTIFFTQRRVDKMTSLETEKVSKISLVDLAGSER-ADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKSKKSKKADFIPYRDSVLTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQI 351          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF11_DICDI (Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.074e-19
Identity = 73/188 (38.83%), Postives = 106/188 (56.38%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSA---DGSES---KPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPK-KDILSSTINLKE------STTAPLSSALPTTSPYED 523
            G+T  N +SSRSH I ++ I+      +GS S   + P     L+ IDLAGSE+ +++T +  + + EG+ INKSLL L   I  L + D G+IP+R SKLT VL++S  GNSR  +I  I+ +S   E + NTL++A R K +S  NN K  +IL     LK+         + LS AL T    ++
Sbjct:  263 GSTSYNLQSSRSHTIFKMIIESKEVLPEGSGSGGLESPVRYSTLNLIDLAGSEKASESTISAIRNK-EGSYINKSLLTLGTVISKLSEKDTGYIPYRDSKLTRVLQNSLSGNSRVAIICTITLASNNFEESHNTLKFASRAKKIS--NNAKVNEILDDKALLKQYRNEIAELKSKLSDALSTEKELQE 447          
The following BLAST results are available for this feature:
BLAST of FC930387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIF3C_MOUSE9.713e-2130.68Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3... [more]
KIF3C_PONAB1.269e-2038.29Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3... [more]
KL61_DROME2.164e-2038.61Bipolar kinesin KRP-130 OS=Drosophila melanogaster... [more]
KIF7_DANRE2.164e-2041.26Kinesin-like protein kif7 OS=Danio rerio GN=kif7 P... [more]
KIF3C_HUMAN2.164e-2038.29Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3... [more]
KI21A_MOUSE2.164e-2038.17Kinesin-like protein KIF21A OS=Mus musculus GN=Kif... [more]
KIF5_DICDI2.826e-2036.82Kinesin-related protein 5 OS=Dictyostelium discoid... [more]
KIF1C_MOUSE4.820e-2045.07Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1... [more]
KIF1A_AEDAE1.074e-1944.14Kinesin-like protein unc-104 OS=Aedes aegypti GN=u... [more]
KIF11_DICDI1.074e-1938.83Kinesin-related protein 11 OS=Dictyostelium discoi... [more]

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Properties
Property NameValue
Genbank descriptionC34007A06EF PostHarvC1 Citrus clementina cDNA clone C34007A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930387 ID=FC930387; Name=FC930387; organism=Citrus clementina; type=EST; length=734bp
GGGTACAACTGGTGCTAATGAGGAATCCTCCCGTTCACATGCCATACTTC
AGCTTGCTATCAAGAGGTCAGCTGATGGTAGTGAATCAAAGCCTCCTCGA
CTTGTTGGCAAGCTCTCTTTTATAGATCTTGCTGGAAGTGAACGTGGTGC
TGATACTACAGACAACGATAAACAGACAAGAATGGAAGGAGCAGAGATAA
ATAAGAGCTTGCTTGCACTAAAGGAATGCATAAGAGCTCTTGACAATGAT
CAGGGTCACATTCCTTTCAGAGGCAGTAAATTAACTGAGGTTCTGAGGGA
TTCATTTGTTGGCAATTCACGCACGGTTATGATATCATGCATTTCACCAA
GCTCAGGGTGTTGTGAACACACTCTCAACACATTAAGATATGCCGACAGA
GTGAAGAGTCTTTCAAAAGGGAACAATCCTAAAAAGGACATACTGTCTTC
AACCATAAATTTGAAGGAGTCAACTACTGCACCCTTATCTTCAGCTCTAC
CAACAACATCCCCTTATGAGGATGACACTGATGCATGGCCTGAACAAAAT
GAAAGAGATGATTTTGACGCATCAGAGGATTCCTATGAACCAGAGAAGCC
GGTATGGATGAAAAGTGGGAAGCTAGAGCAATTCAATCTCCCTTCTGCAC
AGGATCAATTACGAAAACCACCCAATGGTCAGACAAGGTGGAAGGAGCAG
CCAAAATCTGGGTTTTAAGAATTTCAATTCAGAT
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