FC930387

Overview
NameFC930387
Unique NameFC930387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KI21B_HUMAN (Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.074e-19
Identity = 69/186 (37.10%), Postives = 96/186 (51.61%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQL----------------AIKRSADGS--ESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQG---HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSAL 499
            +T  N +SSRSHAI  +                A+    DG+   S+   L  K  F+DLAGSER   T    ++ + EG  IN  LLAL   I AL +      H+P+R SKLT +L+DS  GNS+T+MI+C+SPS      TLNTL+YA+R +++       +D  S  I+   +  A L   L
Sbjct:  215 STQMNVQSSRSHAIFTIHLCQMRMCTQPDLVNEAVTGLPDGTPPSSEYETLTAKFHFVDLAGSERLKRTGATGERAK-EGISINCGLLALGNVISALGDQSKKVVHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVVVNQDKTSQQISALRAEIARLQMEL 399          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF1C_HUMAN (Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1C PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.403e-19
Identity = 63/142 (44.37%), Postives = 82/142 (57.75%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAI-KRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGH------IPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            T  NE SSRSHA+  +   +R  D         V K+S +DLAGSER AD++        EGA INKSL  L + I AL + Q        IP+R S LT +L+++  GNSRT MI+ +SP+    E TL+TLRYADR K +
Sbjct:  208 TNMNETSSRSHAVFTIVFTQRCHDQLTGLDSEKVSKISLVDLAGSER-ADSSGARGMRLKEGANINKSLTTLGKVISALADMQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQI 348          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF14_HUMAN (Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF14 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.403e-19
Identity = 62/170 (36.47%), Postives = 96/170 (56.47%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADG---SESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGH----IPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSA 496
            TG N++SSRSH++  L + ++       E    R+  +++ IDLAGSER +    N  + + EG  INKSLL L + I AL          IP+R S LT +L++S  GNS+T MI+ ISP++   E TL+TLRYA++ + +       +D+ +  I   ++  A L +A
Sbjct:  561 TGMNDKSSRSHSVFTLVMTQTKTEFVEGEEHDHRITSRINLIDLAGSERCSTAHTNGDRLK-EGVSINKSLLTLGKVISALSEQANQRSVFIPYRESVLTWLLKESLGGNSKTAMIATISPAASNIEETLSTLRYANQARLIVNIAKVNEDMNAKLIRELKAEIAKLKAA 729          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: CIN8_YEAST (Kinesin-like protein CIN8 OS=Saccharomyces cerevisiae GN=CIN8 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.403e-19
Identity = 68/201 (33.83%), Postives = 105/201 (52.24%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSK----GNNPKKDILSSTINLKESTTAPLSSALPTTSPYEDDTDAWPEQNERDDFDASEDSYEPE 595
            +T  N+ SSRSH I  + + +       +    + K++ +DLAGSE   + +    Q   E   IN+SLL L   I AL +  GHIPFR SKLT +L+DS  GN++T +I+ ISP+    E T +TL YA + K++      G+   KDIL   I ++    A + S L +T   E     +  Q+   + ++  +SY+ E
Sbjct:  347 STKMNDFSSRSHTIFTITLYKKHQDELFR----ISKMNLVDLAGSEN-INRSGALNQRAKEAGSINQSLLTLGRVINALVDKSGHIPFRESKLTRLLQDSLGGNTKTALIATISPAKVTSEETCSTLEYASKAKNIKNKPQLGSFIMKDILVKNITME---LAKIKSDLLSTKSKE---GIYMSQDHYKNLNSDLESYKNE 536          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KINH_SYNRA (Kinesin heavy chain OS=Syncephalastrum racemosum PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAI-KRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDI 442
            T  N ESSRSH+I+   I +++ D   +K     GKL  +DLAGSE+    T    QT  E  +INKSL AL   I AL D    H+P+R SKLT +L++S  GNSRT +I   SPSS     TL+TLR+  R KS+        D+
Sbjct:  198 TNMNAESSRSHSIVMFTITQKNVDTGAAKS----GKLYLVDLAGSEK-VGKTGASGQTLEEAKKINKSLTALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNEAETLSTLRFGARAKSIKNKAKVNADL 339          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF1C_RAT (Kinesin-like protein KIF1C OS=Rattus norvegicus GN=Kif1c PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 63/142 (44.37%), Postives = 83/142 (58.45%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAI-KRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGH------IPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            T  NE SSRSHA+  +   +RS D         V K+S ++LAGSER AD++        EGA INKSL  L + I AL + Q        IP+R S LT +L+++  GNSRT MI+ +SP+    E TL+TLRYADR K +
Sbjct:  207 TNMNETSSRSHAVFTIVFTQRSHDQLTGLDSEKVSKISLVNLAGSER-ADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQI 347          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF1A_MOUSE (Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 63/148 (42.57%), Postives = 84/148 (56.76%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESK-PPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQG-----------HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            T  NE SSRSHA+  +   +    +E+      V K+S +DLAGSER AD+T        EGA INKSL  L + I AL + D G            IP+R S LT +LR++  GNSRT M++ +SP+    + TL+TLRYADR K +
Sbjct:  208 TNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSER-ADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQI 354          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF1A_HUMAN (Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 63/148 (42.57%), Postives = 84/148 (56.76%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESK-PPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQG-----------HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            T  NE SSRSHA+  +   +    +E+      V K+S +DLAGSER AD+T        EGA INKSL  L + I AL + D G            IP+R S LT +LR++  GNSRT M++ +SP+    + TL+TLRYADR K +
Sbjct:  208 TNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSER-ADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQI 354          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KI21A_HUMAN (Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 71/186 (38.17%), Postives = 96/186 (51.61%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAIKRS-------ADG-------SESKPPR----LVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQG---HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSAL 499
            +T  N +SSRSHAI  + + ++       AD        SES        L  K  F+DLAGSER   T    ++ + EG  IN  LLAL   I AL +      H+P+R SKLT +L+DS  GNS+T+MI+C+SPS      TLNTL+YA+R +++       +D  S  IN   S    L   L
Sbjct:  216 STQMNVQSSRSHAIFTIHVCQTRVCPQIDADNATDNKIISESAQMNEFETLTAKFHFVDLAGSERLKRTGATGERAK-EGISINCGLLALGNVISALGDKSKRATHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVMVNQDRASQQINALRSEITRLQMEL 400          
BLAST of FC930387 vs. ExPASy Swiss-Prot
Match: KIF11_MOUSE (Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.392e-19
Identity = 57/132 (43.18%), Postives = 78/132 (59.09%), Query Frame = 2
Query:   17 NEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            N  SSRSH++  + I       + +    +GKL+ +DLAGSE    +   DK+ R E   IN+SLL L   I AL     HIP+R SKLT +L+DS  G +RT +I+ ISP+S   E TL+TL YA R K++
Sbjct:  228 NAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAR-EAGNINQSLLTLGRVITALVERTPHIPYRESKLTRILQDSLGGRTRTSIIATISPASFNLEETLSTLEYAHRAKNI 358          
The following BLAST results are available for this feature:
BLAST of FC930387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KI21B_HUMAN1.074e-1937.10Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF... [more]
KIF1C_HUMAN1.403e-1944.37Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1... [more]
KIF14_HUMAN1.403e-1936.47Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF1... [more]
CIN8_YEAST1.403e-1933.83Kinesin-like protein CIN8 OS=Saccharomyces cerevis... [more]
KINH_SYNRA1.832e-1943.54Kinesin heavy chain OS=Syncephalastrum racemosum P... [more]
KIF1C_RAT1.832e-1944.37Kinesin-like protein KIF1C OS=Rattus norvegicus GN... [more]
KIF1A_MOUSE1.832e-1942.57Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1... [more]
KIF1A_HUMAN1.832e-1942.57Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1... [more]
KI21A_HUMAN1.832e-1938.17Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF... [more]
KIF11_MOUSE2.392e-1943.18Kinesin-like protein KIF11 OS=Mus musculus GN=Kif1... [more]

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Properties
Property NameValue
Genbank descriptionC34007A06EF PostHarvC1 Citrus clementina cDNA clone C34007A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930387 ID=FC930387; Name=FC930387; organism=Citrus clementina; type=EST; length=734bp
GGGTACAACTGGTGCTAATGAGGAATCCTCCCGTTCACATGCCATACTTC
AGCTTGCTATCAAGAGGTCAGCTGATGGTAGTGAATCAAAGCCTCCTCGA
CTTGTTGGCAAGCTCTCTTTTATAGATCTTGCTGGAAGTGAACGTGGTGC
TGATACTACAGACAACGATAAACAGACAAGAATGGAAGGAGCAGAGATAA
ATAAGAGCTTGCTTGCACTAAAGGAATGCATAAGAGCTCTTGACAATGAT
CAGGGTCACATTCCTTTCAGAGGCAGTAAATTAACTGAGGTTCTGAGGGA
TTCATTTGTTGGCAATTCACGCACGGTTATGATATCATGCATTTCACCAA
GCTCAGGGTGTTGTGAACACACTCTCAACACATTAAGATATGCCGACAGA
GTGAAGAGTCTTTCAAAAGGGAACAATCCTAAAAAGGACATACTGTCTTC
AACCATAAATTTGAAGGAGTCAACTACTGCACCCTTATCTTCAGCTCTAC
CAACAACATCCCCTTATGAGGATGACACTGATGCATGGCCTGAACAAAAT
GAAAGAGATGATTTTGACGCATCAGAGGATTCCTATGAACCAGAGAAGCC
GGTATGGATGAAAAGTGGGAAGCTAGAGCAATTCAATCTCCCTTCTGCAC
AGGATCAATTACGAAAACCACCCAATGGTCAGACAAGGTGGAAGGAGCAG
CCAAAATCTGGGTTTTAAGAATTTCAATTCAGAT
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