FC930389

Overview
NameFC930389
Unique NameFC930389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_EMENI (NADH-cytochrome b5 reductase 1 OS=Emericella nidulans GN=cbr1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.086e-35
Identity = 73/162 (45.06%), Postives = 104/162 (64.20%), Query Frame = 2
Query:  263 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILEN-----PNXQTKVHLIYA 730
            S KP+  L+P  F+ F L ++  +SHNV  + F LP PT +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   ++VGD + V+GPKG   Y P   R  GM AGG+GITPM  + +AI+ N      N  T+V LI+A
Sbjct:   54 SSKPRKVLNPNEFQNFVLKEKNDISHNVTIYRFALPRPTDILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKVGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGGNDTTQVDLIFA 215          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_NEOFI (NADH-cytochrome b5 reductase 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 8.979e-35
Identity = 70/160 (43.75%), Postives = 103/160 (64.38%), Query Frame = 2
Query:  269 KPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILEN-----PNXQTKVHLIYA 730
            KP+  L+P  F+EF L ++  +SHNV  + F LP P  +LGLPIGQHIS     + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD + V+GPKG   Y P   R  GM AGG+GITPM  + +A++ N      N  TK+ LI+A
Sbjct:   52 KPRKVLNPTEFQEFVLKEKTDISHNVCIYRFALPRPADILGLPIGQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGGNDTTKLDLIFA 211          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPNC (NADH-cytochrome b5 reductase 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.532e-34
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 2
Query:  263 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILEN-----PNXQTKVHLIYA 730
            S KP+  L+P +F+ F L ++  +SHNV  + F LP PT +LGLPIGQHIS       G+EV++ YTP + D++ G+F+L++K YPQG +S +   + VG  + V+GPKG   Y P   R  GM AGG+GITPM+ + +AI+ N      N  T+V LI+A
Sbjct:   48 SNKPRKVLNPGDFQHFTLKEKNDISHNVTVYRFALPRPTDILGLPIGQHISLAATIG-GKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLEVGQTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMYQIIKAIIRNRPRNGGNDTTQVDLIFA 207          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_AJECN (NADH-cytochrome b5 reductase 1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.412e-34
Identity = 72/165 (43.64%), Postives = 108/165 (65.45%), Query Frame = 2
Query:  254 LYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK-DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAIL-----ENPNXQTKVHLIYA 730
            ++S+++ KV L+P  F+ F+L ++  +SHNVA + F LP PT +LGLPIGQHIS     + Q +E+++ YTP + D + G+F+L++K YPQG +S H   +R+G  + V+GPKG   Y P  V+  GM AGG+GITPM  + +AI+        N  T+V LI+A
Sbjct:   49 VFSNRQRKV-LNPTEFQNFELKEKTIVSHNVAIYRFALPRPTDILGLPIGQHISLAATIEGQTKEIMRSYTPISSDQEAGYFDLLVKAYPQGNISKHLAGLRIGQTMKVRGPKGAMVYTPNMVKKIGMIAGGTGITPMLQIIKAIIRGRPRNGGNDTTQVDLIFA 212          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_ASHGO (NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.693e-33
Identity = 68/146 (46.58%), Postives = 101/146 (69.18%), Query Frame = 2
Query:  293 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            ++++EF L+ +  L+HN A + F LP   +VLGLPIGQHIS  G    G+E+++ YTPT+LDSD  G+FEL++K Y +G +S    E+ +GD + V+GPKG + Y+P   +  GM AGG+GI+PM+ + RAI  NP  +T+V L+Y
Sbjct:   41 KDWQEFSLLTKTVLTHNTAIYRFGLPEADAVLGLPIGQHISISGV-IDGKEMLRSYTPTSLDSDATGYFELLVKSYEKGNISKMLAELAIGDRIKVRGPKGFYHYEPNMYKEIGMIAGGTGISPMYQIIRAIFSNPRDKTRVCLVY 185          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_CANGA (NADH-cytochrome b5 reductase 1 OS=Candida glabrata GN=CBR1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.098e-32
Identity = 69/157 (43.95%), Postives = 106/157 (67.52%), Query Frame = 2
Query:  260 SSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSD-VGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            S K+   +L    F+EF+LV++ QL+HN AK+ F+L   + VLGLPIGQHI+ +     G+ V + YTPT+LD + VG FEL++K YP+G +S H  +M++G+ + + GP+G + Y P   +   M AGG+GITPMF + +AI  +P+ +T+V L+Y
Sbjct:   29 SQKEAVKALLKTEFREFELVEKEQLTHNTAKYKFKLADESHVLGLPIGQHITVKTIIG-GKPVSRSYTPTSLDEECVGFFELLVKSYPEGNISKHIGDMKIGEKINISGPRGFYEYVPNVHKHLAMVAGGTGITPMFQIMKAIARDPSDKTRVTLLY 184          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_SCHPO (NADH-cytochrome b5 reductase 1 OS=Schizosaccharomyces pombe GN=cbr1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.194e-32
Identity = 64/146 (43.84%), Postives = 97/146 (66.44%), Query Frame = 2
Query:  293 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            +  ++F+L  +  L+HN A + F LP    VLGLPIGQH+     D  G+E  + YTP + D+D G+F+L++K YP G++S  F E+++GD + V+GPKG ++++ G  R FGM AGG+GITPM  + RA+L N    T++ L+YA
Sbjct:   59 DKIQQFELSDKAVLNHNTAIYRFRLPRANDVLGLPIGQHLKVF-VDVDGKEYSRSYTPLSSDADKGYFDLLVKSYPNGKVSKKFSELKIGDTIGVRGPKGNWKHRTGLARHFGMIAGGTGITPMLQIIRAVLSNFEDPTEITLLYA 203          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_VANPO (NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.612e-31
Identity = 70/163 (42.94%), Postives = 104/163 (63.80%), Query Frame = 2
Query:  254 LYSSKKPKVSLDPE----NFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            +++S++PK    P      + +F LV   +L+ N A + F+LPT   VLGLPIGQHI+ +     G EV++ YTP +LDS+  G+FEL+IK Y QG++S  F  +++GD + V+GPKG + Y     +   M AGGSG+TPM+ + ++I ENP  +TKV  IY
Sbjct:   24 MFTSEEPKSKALPVLVKGEYMQFPLVSIKKLNRNSAIYRFKLPTDEHVLGLPIGQHITIKAH-IDGSEVVRSYTPISLDSEAKGYFELLIKSYEQGKISKMFTSLKIGDTIDVQGPKGFYEYTDRSSKHLAMIAGGSGLTPMYQIIKSIAENPKDKTKVTFIY 185          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAST (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae GN=CBR1 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.752e-30
Identity = 66/156 (42.31%), Postives = 101/156 (64.74%), Query Frame = 2
Query:  269 KPKVSLDPE--NFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            K K  LDP+  +F+ F LV++  L+HN + + F LP    VLGLPIGQHI  +  +  G+++ + YTPT+LD D  G+FEL++K YP G +S    E+++GD + +KGP+G + Y+       GM AGG+GI PM+ + +AI  +P+  TKV L++
Sbjct:   28 KTKPVLDPKRNDFQSFPLVEKTILTHNTSMYKFGLPHADDVLGLPIGQHIVIKA-NINGKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAIAMDPHDTTKVSLVF 182          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NCB5R_ARATH (NADH-cytochrome b5 reductase-like protein OS=Arabidopsis thaliana GN=At5g20080 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 71/168 (42.26%), Postives = 104/168 (61.90%), Query Frame = 2
Query:  251 YLYSSKK---PKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCR---GKDSQGEE--VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            YL  +K+   PK +L+P+ + EFKL    ++SHN   F F    P++ LGL +   +  R   G +++G+   VI+PYTP +     G+F+L+IK+YP G+MS HF  ++ GD L VKGP  +F+Y P   +  GM AGGSGITPM  V  AI++NP   T++ L+YA
Sbjct:   59 YLDQAKEETGPKTALNPDKWLEFKLQDTARVSHNTQLFRFSFD-PSAELGLHVASCLLTRAPLGYNAEGKTKYVIRPYTPISDPEAKGYFDLLIKVYPDGKMSQHFASLKPGDVLEVKGPVEKFKYSPNMKKHIGMIAGGSGITPMLQVIDAIVKNPEDNTQISLLYA 225          
The following BLAST results are available for this feature:
BLAST of FC930389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
NCB5R_EMENI3.086e-3545.06NADH-cytochrome b5 reductase 1 OS=Emericella nidul... [more]
NCB5R_NEOFI8.979e-3543.75NADH-cytochrome b5 reductase 1 OS=Neosartorya fisc... [more]
NCB5R_ASPNC1.532e-3444.72NADH-cytochrome b5 reductase 1 OS=Aspergillus nige... [more]
NCB5R_AJECN3.412e-3443.64NADH-cytochrome b5 reductase 1 OS=Ajellomyces caps... [more]
NCB5R_ASHGO1.693e-3346.58NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii ... [more]
NCB5R_CANGA1.098e-3243.95NADH-cytochrome b5 reductase 1 OS=Candida glabrata... [more]
NCB5R_SCHPO3.194e-3243.84NADH-cytochrome b5 reductase 1 OS=Schizosaccharomy... [more]
NCB5R_VANPO4.612e-3142.94NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma ... [more]
NCB5R_YEAST1.752e-3042.31NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]
NCB5R_ARATH5.099e-3042.26NADH-cytochrome b5 reductase-like protein OS=Arabi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34007A08EF PostHarvC1 Citrus clementina cDNA clone C34007A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930389 ID=FC930389; Name=FC930389; organism=Citrus clementina; type=EST; length=730bp
AGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTCCCACCCATT
TACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATTTATTCTTTA
TATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAGCT
TTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCAGC
TTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTTGGTGCTGCT
TACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAATTT
CAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGCAA
AGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAATT
GGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTTAT
TAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGAAT
TGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTGAG
ATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTCAG
GTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTCTG
GCATCACTCCAATGTTTCCAGTTACTAGAGCCATATTAGAGAACCCAAAT
NGACAGACAAAGGTGCACCTCATTTATGCC
back to top