FC930389

Overview
NameFC930389
Unique NameFC930389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NB5R2_MOUSE (NADH-cytochrome b5 reductase 2 OS=Mus musculus GN=Cyb5r2 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.345e-22
Identity = 64/181 (35.36%), Postives = 100/181 (55.25%), Query Frame = 2
Query:  266 KKPKVSL-DPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKM--------YPQ-GRMSHHFREMRVGDYLAVKGPKGRFRY-QPGQ---------------VRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            KK  ++L DPE      L+++ Q+SHN  +F F LP+P  VLGLP+G ++    +    E VI+ YTP + D D G  +L+IK+        YP+ G+M+ +   M++GD +  +GP GR  Y +PG                V   GM AGG+GITPM  + R I ++ + +T++ L++A
Sbjct:    5 KKDLITLQDPEAKYPLPLIEKEQISHNTRRFRFGLPSPDHVLGLPVGNYVHLLAQ-INNELVIRAYTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNEPGTLLIKANKTSEPEKKLVHHLGMIAGGTGITPMLQLIRHITKDTSDETRMSLLFA 184          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_ASPTN (NADH-cytochrome b5 reductase 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mcr1 PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22
Identity = 52/145 (35.86%), Postives = 83/145 (57.24%), Query Frame = 2
Query:  293 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            + + + KL +   L+HN  +F FE     +V GL +   +  + K   G+ V++PYTP + +S  G  +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+ + R I +NP  +TKV L+Y
Sbjct:   69 QGWVDLKLSEIEVLNHNTKRFRFEFEDKEAVSGLNVASALLTKFKPEGGKAVLRPYTPVSDESQPGFLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPLPKYPWEANKHQHICLIAGGTGITPMYQLARHIFKNPEDKTKVTLVY 213          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.294e-22
Identity = 58/173 (33.53%), Postives = 94/173 (54.34%), Query Frame = 2
Query:  272 PKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMY---------PQGRMSHHFREMRVGDYLAVKGPKGRFRYQ-------PGQVRA----FGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            P V L+P    +  L++R++L+ N   F F LP+P   +GLP+G+H+        GE V++ YTP + D ++G  +++IK+Y           G+MS HF  +R+GD +  KGP G F Y         G++          AGG+GITP + V +A L +P  +T++ L++A
Sbjct:  599 PLVVLNPRQKVKLPLIERIELNRNTRIFRFGLPSPQHRIGLPVGKHVFTYA-TINGENVMRAYTPISGDEELGRLDMLIKVYFANEHPAFPDGGKMSQHFESLRIGDTVEFKGPLGHFVYDGRGSYTLNGKLHKHATHMSFVAGGTGITPCYAVIKAALRDPEDKTQISLVFA 770          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_CANGA (NADH-cytochrome b5 reductase 2 OS=Candida glabrata GN=MCR1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.996e-22
Identity = 51/155 (32.90%), Postives = 90/155 (58.06%), Query Frame = 2
Query:  263 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            ++ PKV +    + + +L K ++ SH+  +F F+LPT  SV GL +   +  +    +G  VI+PYTP +  S+ G+ E VIK Y  G+M+ H  +++  D LA +GP  +++++P       +  GG+GITP++ +   I +N   +TK++L Y
Sbjct:   38 NENPKVFIGDRKWIDLELEKIIEESHDTKRFFFKLPTDDSVSGLTLASAVLTKFMTPKGNPVIRPYTPVSDLSEKGYIEFVIKHYEGGKMTDHLFQLKPKDTLAFQGPIPKWQWKPNSFDTITLLGGGTGITPLYQLVHHITQNKEDKTKINLFY 192          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_BOTFB (NADH-cytochrome b5 reductase 2 OS=Botryotinia fuckeliana (strain B05.10) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.996e-22
Identity = 55/147 (37.41%), Postives = 83/147 (56.46%), Query Frame = 2
Query:  293 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            + F   KL     ++HN  KF FELP    V GL +   +  + K  + ++  I+PYTPT+ +S+ G  +L++K YP G MS H  +M  G  L  KGP  ++ +   +     + AGG+GITPM+ + RAI  NP  +TKV L++A
Sbjct:   95 QGFISLKLDSVENINHNTKKFRFELPESDQVSGLQVASALLTKFKGPEMQKPAIRPYTPTSDESEQGFIDLLVKKYPNGVMSEHMHDMVPGQRLDFKGPIPKYPWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLVFA 241          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 62/171 (36.26%), Postives = 95/171 (55.56%), Query Frame = 2
Query:  278 VSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHIS-CRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGR---------MSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            V+L+P      KL+ +  +SH+V  F F LP+   ++GLP+G+HI  C   D +    ++ YTPT+   +VG+F+LV+K+Y +G          MS H   + +G  L VKGP G   Y          +P       M AGG+GITP++ V RAIL++P   T++H++YA
Sbjct:  629 VALNPREKIPCKLISKTSISHDVRLFRFALPSDDLLMGLPVGKHIFLCATVDEK--LCMRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPTGGIMSQHLDSLPIGSVLDVKGPLGHIVYTGRGNFLVHGKPRFATRLAMLAGGTGITPIYQVVRAILKDPEDCTEMHVVYA 797          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_ASPNC (NADH-cytochrome b5 reductase 2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 51/141 (36.17%), Postives = 81/141 (57.45%), Query Frame = 2
Query:  305 EFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            + KL +   L+HN  +  FE     ++ GL +   +  + K +  + VI+PYTPT+ +   G+ +LV+K+YP G MS H   M VG  L  KGP  ++ ++  +     + AGG+GITPM+ + R I +NP  QTKV L++
Sbjct:   76 DLKLSEIEVLNHNTKRLRFEFEDKEALSGLQVASALLTKFKPADAKAVIRPYTPTSDEETPGYIDLVVKVYPNGPMSEHLHSMNVGQRLDFKGPIVKYPWETNKHNHICLIAGGTGITPMYQLAREIFKNPEDQTKVTLVF 216          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22
Identity = 64/171 (37.43%), Postives = 98/171 (57.31%), Query Frame = 2
Query:  278 VSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHI-SCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRYQ-PGQVRAFG---------MTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            V+L P      KL+ +  +S +V KF F LP+   VLGLP+G+HI  C   D   +  ++ YTPT+   +VG+FELV+K+Y +         G+MS +   +++G +L VKGP G   YQ  G     G         M AGG+GITP++ V +AIL++P   T+++++YA
Sbjct:  642 VALIPREKIPCKLIDKQSISPDVRKFRFALPSEDQVLGLPVGKHIFLCAVIDD--KLCMRAYTPTSTIDEVGYFELVVKIYFKGIHPKFPNGGQMSQYLDSLQLGSFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQAILKDPEDDTEMYVVYA 810          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_PICGU (NADH-cytochrome b5 reductase 2 OS=Pichia guilliermondii GN=MCR1 PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22
Identity = 51/141 (36.17%), Postives = 80/141 (56.74%), Query Frame = 2
Query:  305 EFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            + KL K   +S N   F FEL +P  V GL     +  +   ++G  VI+PYTP +     G  + VIK Y  G+MS HF  ++ GD ++ KGP  +++++P Q ++  +  GG+GITP++ +   I +NP  +TKV L Y
Sbjct:   49 DLKLKKSWDVSSNTRHFVFELKSPEDVSGLVTASCLMTKFVTAKGNNVIRPYTPVSDVDQKGTIDFVIKKYDGGKMSTHFHGLKEGDTVSFKGPIVKWKWEPNQFQSIALIGGGTGITPLYQLLHEITKNPEDKTKVKLFY 189          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: YMM5_YEAST (Uncharacterized oxidoreductase YML125C OS=Saccharomyces cerevisiae GN=YML125C PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.675e-22
Identity = 54/158 (34.18%), Postives = 87/158 (55.06%), Query Frame = 2
Query:  257 YSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            YS+ K + SL P+ +   +L  +  +S N A + F+L T    L +P G H++ R     G++ ++ Y P +   + G+ +LV+K Y  G++S +F  +  GD +  KGP G   Y+P   +  G+ AGGSGITP+  +   I+  P   TKV L+YA
Sbjct:   58 YSAYKRRRSLYPDRWTSLELEDQTIISKNTALYRFKLKTRLESLDIPAGHHVAVR-VPIDGKQEVRYYNPISSKLESGYLDLVVKAYVDGKVSKYFAGLNSGDTVDFKGPIGTLNYEPNSSKHLGIVAGGSGITPVLQILNEIITVPEDLTKVSLLYA 214          
The following BLAST results are available for this feature:
BLAST of FC930389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
NB5R2_MOUSE1.345e-2235.36NADH-cytochrome b5 reductase 2 OS=Mus musculus GN=... [more]
MCR1_ASPTN1.756e-2235.86NADH-cytochrome b5 reductase 2 OS=Aspergillus terr... [more]
NIA_VOLCA2.294e-2233.53Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
MCR1_CANGA2.996e-2232.90NADH-cytochrome b5 reductase 2 OS=Candida glabrata... [more]
MCR1_BOTFB2.996e-2237.41NADH-cytochrome b5 reductase 2 OS=Botryotinia fuck... [more]
NIA2_SOYBN3.913e-2236.26Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
MCR1_ASPNC3.913e-2236.17NADH-cytochrome b5 reductase 2 OS=Aspergillus nige... [more]
NIA1_TOBAC5.111e-2237.43Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
MCR1_PICGU5.111e-2236.17NADH-cytochrome b5 reductase 2 OS=Pichia guillierm... [more]
YMM5_YEAST6.675e-2234.18Uncharacterized oxidoreductase YML125C OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionC34007A08EF PostHarvC1 Citrus clementina cDNA clone C34007A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930389 ID=FC930389; Name=FC930389; organism=Citrus clementina; type=EST; length=730bp
AGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTCCCACCCATT
TACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATTTATTCTTTA
TATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAGCT
TTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCAGC
TTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTTGGTGCTGCT
TACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAATTT
CAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGCAA
AGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAATT
GGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTTAT
TAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGAAT
TGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTGAG
ATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTCAG
GTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTCTG
GCATCACTCCAATGTTTCCAGTTACTAGAGCCATATTAGAGAACCCAAAT
NGACAGACAAAGGTGCACCTCATTTATGCC
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