FC930389

Overview
NameFC930389
Unique NameFC930389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NIA1_MAIZE (Nitrate reductase [NADH] (Fragment) OS=Zea mays PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.675e-22
Identity = 58/160 (36.25%), Postives = 90/160 (56.25%), Query Frame = 2
Query:  311 KLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFPVTRAIL-ENPNXQTKVHLIYA 730
            +LV + +LS +V  F F LP+P  VLGLPIG+HI       +G+  ++ YTPT++  ++GHF+L++K+Y +         G M+ +   + VG Y+ VKGP G   Y          +        M  GGSGITPM+ + +A+L + P   T++HL+YA
Sbjct:  367 RLVGKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCA-SIEGKLCMRAYTPTSMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVINGKQRHASRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYA 525          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NB5R2_CHICK (NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN=CYB5R2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.675e-22
Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 2
Query:  269 KPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------------QPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            +P    DP+      LV + ++SH+  KF F LP+P  VLGLP+GQH+    K   G  VI+ YTP + D   G+ +L+IK+Y +         G+MS +   M++GD +  +GP G   Y                Q    +  G+ AGG+GITPM  + R I  +P   TK +L++A
Sbjct:   35 RPVTLRDPQAKYPLPLVGKEEISHDTKKFRFGLPSPDHVLGLPVGQHVYLSAK-INGNLVIRAYTPVSSDETKGYVDLIIKVYYKNVNPKFPEGGKMSQYLDSMKIGDVIDFRGPNGLLVYKGSGTFMIKPDKKSEAQRKFAKHLGVIAGGTGITPMLQLIRHITSDPKDSTKCYLLFA 212          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_CANAL (NADH-cytochrome b5 reductase 2 OS=Candida albicans GN=MCR1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.675e-22
Identity = 51/151 (33.77%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  275 KVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            K   D   + + KL K + L+HN     F+L     V GL     +  +    +G  VI+PYTP +  +  G  + VIK Y  G+MS H  +++ G+ L+ KGP  +++++P Q ++  +  GG+GITP++ +   I  NP   TKV+LIY
Sbjct:   45 KTFTDSNEWVDLKLSKSIDLTHNTKHLVFKLKDENDVSGLITASCLLTKFVTPKGNNVIRPYTPVSDVNQSGEIDFVIKKYDGGKMSSHIFDLKEGETLSFKGPIVKWKWEPNQFKSIALIGGGTGITPLYQLLHQITSNPKDNTKVNLIY 195          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.717e-22
Identity = 65/175 (37.14%), Postives = 98/175 (56.00%), Query Frame = 2
Query:  272 PKVSL-DPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHI-SCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMY---------PQGRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFPVTRAIL-ENPNXQTKVHLIYA 730
            P ++L +P      +LV R  LS +V  F F LP+   VLGLP+G+HI  C   D  G+  ++ YTPT+   +VGHF+L++K+Y           GRM+ +   + VG ++ VKGP G   Y          +P +     M AGGSGITP++ V +A+L + P  +T++HL+YA
Sbjct:  622 PVIALSNPREKVPCQLVARTVLSRDVRLFRFALPSSGQVLGLPVGKHIFVCASID--GKLCMRAYTPTSSVDEVGHFDLLVKVYFRNENTKFPDGGRMTQYLDSLPVGAHVDVKGPLGHVEYVGRGGFVIDGKPRKAGRLAMVAGGSGITPIYQVIQAVLRDQPEDKTEMHLVYA 794          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NB5R2_RAT (NADH-cytochrome b5 reductase 2 OS=Rattus norvegicus GN=Cyb5r2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.717e-22
Identity = 63/181 (34.81%), Postives = 99/181 (54.70%), Query Frame = 2
Query:  266 KKPKVSL-DPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKM--------YPQ-GRMSHHFREMRVGDYLAVKGPKGRFRY-QPGQ---------------VRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            KK  ++L DPE      L+++ Q++HN  +F F LP+P  VLGLP+G ++    +    E VI+ YTP + D D G  +L+IK+        YP+ G+M+ +   M++GD +  +GP GR  Y +PG                V   GM AGG+GITPM  + R I ++ +  T++ L++A
Sbjct:    5 KKDLITLQDPEAKYPLPLIEKEQINHNTRRFRFGLPSPDHVLGLPVGNYVHLLAQ-INNELVIRAYTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNEPGTLLIKTDKTSEPEKKLVHHLGMIAGGTGITPMLQLIRHITKDTSDGTRMSLLFA 184          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_EMENI (NADH-cytochrome b5 reductase 2 OS=Emericella nidulans GN=mcr1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.717e-22
Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  263 SKKPKVSLD-PENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            +++PKV     + +   KL     LSHN  +  FE P   +V GL I   +  +     G + VI+PYTPT+ +   G+ ELV+K YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+ + R I +NP  +TKV L++
Sbjct:   60 AERPKVFTGGDQGWVNLKLSDIEILSHNTKRLRFEFPDKEAVSGLHIASALLTKYSPPDGSKPVIRPYTPTSDEDQPGYLELVVKRYPNGPMSEHLHNMNVDQRLDFKGPLPKYPWEANKHKHICLVAGGTGITPMYQLAREIFKNPEDKTKVTLVF 216          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_ASPOR (NADH-cytochrome b5 reductase 2 OS=Aspergillus oryzae GN=mcr1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.717e-22
Identity = 52/146 (35.62%), Postives = 85/146 (58.22%), Query Frame = 2
Query:  293 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            + + + KL +   LSHN  +  FE     +V G+ I   +  + K    E+ V++PYTPT+ +   G+ +LV+K+YP G MS H   M V   L+ KGP  +++++  +     + AGG+GITPM+ + R I +NP+ +TKV L+Y
Sbjct:   72 QGWVDLKLSEIEVLSHNTKRLRFEFEDKEAVSGVTIASALLTKFKPVGAEKAVLRPYTPTSDEDQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLSFKGPLPKYQWETNKHEHIALIAGGTGITPMYQLIRQIFKNPDDKTKVTLVY 217          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NB5R2_DANRE (NADH-cytochrome b5 reductase 2 OS=Danio rerio GN=cyb5r2 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.139e-21
Identity = 64/181 (35.36%), Postives = 98/181 (54.14%), Query Frame = 2
Query:  263 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGP--------KGRFRYQP-----GQVRAF---GMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            +K PK   DP       L+++ +++H+  +F F LP+ + VLGLPIGQHI    K   G  V++ YTP + D D G+ +LV+K+Y +         G+MS +   M++GD +  +GP        KG+F  +P      +VR F    M AGG+GITPM  + R+I  +   +T   LI+A
Sbjct:   38 NKIPKALQDPSVKYPLPLIEKEEINHDTKRFRFGLPSSSHVLGLPIGQHIYLSAK-VNGSLVVRAYTPVSSDQDQGYVDLVVKVYYKNTHPSYPDGGKMSQYLDNMKIGDTIDFRGPNGLLVYNGKGKFAIRPDKKSEAEVRKFKHVAMIAGGTGITPMLQLIRSITADSFDETVCSLIFA 217          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.487e-21
Identity = 61/162 (37.65%), Postives = 94/162 (58.02%), Query Frame = 2
Query:  311 KLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHI-SCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVG-DYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFPVTRAIL-ENPNXQTKVHLIYA 730
            +LV + +LSH+V  F F LP+   VLGLP+G+HI  C   D  G+  ++ YTPT++  ++G FEL++K+Y +         G M+ +   ++VG  Y+ VKGP G   Y          +  + R   M  GGSGITPM+ V +A+L + P  +T++HL+YA
Sbjct:  660 RLVDKKELSHDVRLFRFALPSSDQVLGLPVGKHIFVCATID--GKLCMRAYTPTSMVDEIGQFELLVKVYFRDEHPKFPNGGLMTQYLESLQVGSSYIDVKGPLGHVEYTGRGNFVINGKQRRARRLAMICGGSGITPMYQVIQAVLRDQPEDETEMHLVYA 819          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_SCLS1 (NADH-cytochrome b5 reductase 2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.487e-21
Identity = 55/147 (37.41%), Postives = 82/147 (55.78%), Query Frame = 2
Query:  293 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            + F   KL     ++HN  KF FELP    V GL +   +  + K  + ++  I+PYTPT+ + + G  +L++K YP G MS H  EM  G  L  KGP  ++ +   +     + AGG+GITPM+ + RAI  NP  +TKV L++A
Sbjct:   94 QGFISLKLDSVELVNHNTKKFRFELPESDQVSGLHVTSALITKYKGPEMQKPAIRPYTPTSDEGEKGFIDLLVKKYPNGVMSEHMHEMVPGQRLDFKGPIPKYAWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLVFA 240          
The following BLAST results are available for this feature:
BLAST of FC930389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
NIA1_MAIZE6.675e-2236.25Nitrate reductase [NADH] (Fragment) OS=Zea mays PE... [more]
NB5R2_CHICK6.675e-2234.08NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN... [more]
MCR1_CANAL6.675e-2233.77NADH-cytochrome b5 reductase 2 OS=Candida albicans... [more]
NIA3_MAIZE8.717e-2237.14Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NB5R2_RAT8.717e-2234.81NADH-cytochrome b5 reductase 2 OS=Rattus norvegicu... [more]
MCR1_EMENI8.717e-2236.31NADH-cytochrome b5 reductase 2 OS=Emericella nidul... [more]
MCR1_ASPOR8.717e-2235.62NADH-cytochrome b5 reductase 2 OS=Aspergillus oryz... [more]
NB5R2_DANRE1.139e-2135.36NADH-cytochrome b5 reductase 2 OS=Danio rerio GN=c... [more]
NIA1_HORVU1.487e-2137.65Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
MCR1_SCLS11.487e-2137.41NADH-cytochrome b5 reductase 2 OS=Sclerotinia scle... [more]

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Properties
Property NameValue
Genbank descriptionC34007A08EF PostHarvC1 Citrus clementina cDNA clone C34007A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930389 ID=FC930389; Name=FC930389; organism=Citrus clementina; type=EST; length=730bp
AGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTCCCACCCATT
TACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATTTATTCTTTA
TATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAGCT
TTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCAGC
TTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTTGGTGCTGCT
TACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAATTT
CAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGCAA
AGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAATT
GGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTTAT
TAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGAAT
TGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTGAG
ATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTCAG
GTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTCTG
GCATCACTCCAATGTTTCCAGTTACTAGAGCCATATTAGAGAACCCAAAT
NGACAGACAAAGGTGCACCTCATTTATGCC
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