FC930389

Overview
NameFC930389
Unique NameFC930389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_DEBHA (NADH-cytochrome b5 reductase 2 OS=Debaryomyces hansenii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.487e-21
Identity = 51/141 (36.17%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  305 EFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            + KL K    +HN   F FEL     V GL     +  +    +G  VI+PYTP +     G  E VIK Y  G+MS H  +++  D LA KGP  +++++P Q ++  +  GG+GITP++ +   I +NP  +TKV+L Y
Sbjct:   54 DLKLAKSWDTTHNTKHFVFELANQDDVSGLINASCLLTKFVTPKGNNVIRPYTPISDVDGKGSIEFVIKKYDGGKMSSHIHDLKPNDTLAFKGPVVKWKWEPNQYKSIALIGGGTGITPLYQLMHEITKNPEDKTKVNLFY 194          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 2
Query:  275 KVSLDPENFKEFKLVKRLQLSHNVAKFTFELPT-PTSVLGLPIGQHIS-CRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGR---------MSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            +V+L P      KL+ +  +SH+V  F F LP      LGLP+G+HI  C   D  G+  ++ YTPT+   ++G FELV+K+Y +G          MS +   M VG  L VKGP G   Y          +P   R   M AGG+GITP++ V +AIL++P  +T+++++YA
Sbjct:  655 RVALAPNEKIPCKLISKTSISHDVRVFRFALPGGQDQALGLPVGKHIFICATVD--GKLCMRAYTPTSSIDEMGFFELVVKVYFKGVHPKFPNGGIMSQYLDSMEVGSTLDVKGPLGHIEYTGRGNFMVHGKPRFARRLAMLAGGTGITPIYQVVQAILKDPEDETEMYVVYA 825          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_PHANO (NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria nodorum GN=MCR1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 2
Query:  260 SSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            +SKK     D + F    L K   ++HN  K TF+LP P    GLP+   +  + K  + E+ VI+PYTP +     G  + ++K Y +G MS H   M  G  L +KGP  ++ + P +     + AGG+GITPM+   RAI +NP  +TKV L++
Sbjct:   74 ASKKAFTGGD-QGFISLLLDKSEVVNHNTKKLTFKLPEPDMESGLPVTSAVITKYKGPEMEKPVIRPYTPVSDVDQQGTVDFIVKKYEKGPMSSHMHNMEPGQRLDIKGPIPKYPWSPNKHEHIALIAGGTGITPMWQTARAIFKNPEDKTKVTLVF 229          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: YMI7_YEAST (Uncharacterized oxidoreductase YML087C OS=Saccharomyces cerevisiae GN=YML087C PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.313e-21
Identity = 50/139 (35.97%), Postives = 79/139 (56.83%), Query Frame = 2
Query:  314 LVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            L K+ ++S N + + F+L  P   L +P+G H++ R     GE +++ YTP  + +  GH ELV+K Y  G +S +F ++++  Y+  KGP G   Y        G+ AGGSGITP+  V + I+ +P   T + LIYA
Sbjct:   77 LSKKTRISRNTSLYCFKLKYPFERLHIPMGYHLAVR-VTINGERLVRYYTPVNVPNTEGHLELVVKTYKHGVVSKYFDKLKIRQYVEFKGPLGELEYDQDTATELGIIAGGSGITPVLQVLQEIIPSPEDLTHISLIYA 214          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: NIA_PICAN (Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21
Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 2
Query:  269 KPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGR-------MSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            K +V LDP  + +  L ++  +S +   F F+L     + GLP G+H+  R KDS G+ V++ YTP + +S  G  E++IK+Y   R       M++    ++VG+ + VKGP G F Y          +P Q++ F M +GGSGITP + V +AI  +P  +T V L +
Sbjct:  594 KREVLLDPRKWHKITLAEKEVISSDSRIFKFDLEHSEQLSGLPTGKHLFLRLKDSSGKYVMRAYTPKSSNSLRGRLEILIKVYFPNREYPNGGIMTNLIENLQVGNQIEVKGPVGEFEYVKCGHCSFNNKPYQMKHFVMISGGSGITPTYQVLQAIFSDPEDRTSVQLFF 763          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_PICST (NADH-cytochrome b5 reductase 2 OS=Pichia stipitis GN=MCR1 PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21
Identity = 47/141 (33.33%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  305 EFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            + KL+    LSH+     FELP    V GL     +  +    +G  VI+PYTP +     G  + V+K Y  G+MS H  +++  D L+ KGP  +++++P Q ++  +  GG+GITP++ +   I +NP  +T+V L Y
Sbjct:   53 DLKLISSHDLSHDTKHLVFELPNKDDVSGLVTASLLMTKFVTPKGSNVIRPYTPVSDTEQAGTIDFVVKKYEGGKMSSHIHDLKPNDTLSFKGPFVKWKWEPNQFKSIALIGGGTGITPLYQLIHEITKNPADKTQVSLFY 193          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_ASPFU (NADH-cytochrome b5 reductase 2 OS=Aspergillus fumigatus GN=mcr1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21
Identity = 54/157 (34.39%), Postives = 88/157 (56.05%), Query Frame = 2
Query:  263 SKKPKVSLD-PENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            +++PKV     + + + KL +   LS N  +  FE P   +V GL +   +  + K    E+ VI+PYTP + +   G+ +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+ + R I ++P  QTKV L++
Sbjct:   61 AERPKVFTGGDQGWVDLKLAQIENLSPNTKRLRFEFPDKEAVSGLHVASALLTKFKPQGAEKPVIRPYTPVSDEEQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWEANKHKHICLIAGGTGITPMYQLARKIFKDPEDQTKVTLVF 217          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_ASHGO (NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21
Identity = 51/139 (36.69%), Postives = 77/139 (55.40%), Query Frame = 2
Query:  311 KLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            K+ K  Q+SH+  +FTF LP+   V GL     +  +    +G  VI+PYTP + +   G F+LVIK Y  G+ + H   ++  D +  KGP  ++R+ P    +  +   G+GITP+F +   I ENP   TKVHL+Y
Sbjct:   63 KIAKIEQVSHDTRRFTFALPSQDHVTGLTTASALLAKYVTPKGSNVIRPYTPVSDNMARGMFQLVIKHYDGGKFTTHLFGLKENDTVEFKGPIQKWRWDPNMFDSIVLMGAGTGITPLFQMMHHIAENPTDNTKVHLLY 201          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_AJECN (NADH-cytochrome b5 reductase 2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=MCR1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21
Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 2
Query:  311 KLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLD---SDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIYA 730
            KL     ++HNV K  FE   P SV GL I   +  + K    E+  I+PYTP + +   + +G+ +L++K YP G MS+H   M VG  L  KGP  ++ ++P +     + AGG+GITPM+ + R I  NP  +TKV L++A
Sbjct:   76 KLAHIDNVNHNVKKLRFEFEDPESVSGLHIASALLTKYKGLTDEKPTIRPYTPVSDEGMWASLGYLDLLVKRYPNGPMSNHLHNMAVGQRLDFKGPLPKYPWEPSKHDHICLIAGGTGITPMYQLVRKIFSNPEDKTKVTLVFA 219          
BLAST of FC930389 vs. ExPASy Swiss-Prot
Match: MCR1_NEOFI (NADH-cytochrome b5 reductase 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.380e-21
Identity = 54/157 (34.39%), Postives = 88/157 (56.05%), Query Frame = 2
Query:  263 SKKPKVSLD-PENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFPVTRAILENPNXQTKVHLIY 727
            +++PKV     + + + KL +   LS N  +  FE P   +V GL +   +  + K    E+ VI+PYTP + +   G+ +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+ + R I ++P  QTKV L++
Sbjct:   61 AERPKVFTGGDQGWVDLKLAQIENLSPNTKRLRFEFPDKEAVSGLHVASALLTKFKPHGAEKPVIRPYTPVSDEEQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWEANKHKHICLIAGGTGITPMYQLARKIFKDPEDQTKVTLVF 217          
The following BLAST results are available for this feature:
BLAST of FC930389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
MCR1_DEBHA1.487e-2136.17NADH-cytochrome b5 reductase 2 OS=Debaryomyces han... [more]
NIA_CUCMA1.942e-2136.99Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
MCR1_PHANO1.942e-2136.31NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria no... [more]
YMI7_YEAST3.313e-2135.97Uncharacterized oxidoreductase YML087C OS=Saccharo... [more]
NIA_PICAN5.650e-2134.71Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR... [more]
MCR1_PICST5.650e-2133.33NADH-cytochrome b5 reductase 2 OS=Pichia stipitis ... [more]
MCR1_ASPFU5.650e-2134.39NADH-cytochrome b5 reductase 2 OS=Aspergillus fumi... [more]
MCR1_ASHGO5.650e-2136.69NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii ... [more]
MCR1_AJECN5.650e-2138.19NADH-cytochrome b5 reductase 2 OS=Ajellomyces caps... [more]
MCR1_NEOFI7.380e-2134.39NADH-cytochrome b5 reductase 2 OS=Neosartorya fisc... [more]

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Properties
Property NameValue
Genbank descriptionC34007A08EF PostHarvC1 Citrus clementina cDNA clone C34007A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930389 ID=FC930389; Name=FC930389; organism=Citrus clementina; type=EST; length=730bp
AGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTCCCACCCATT
TACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATTTATTCTTTA
TATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAGCT
TTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCAGC
TTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTTGGTGCTGCT
TACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAATTT
CAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGCAA
AGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAATT
GGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTTAT
TAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGAAT
TGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTGAG
ATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTCAG
GTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTCTG
GCATCACTCCAATGTTTCCAGTTACTAGAGCCATATTAGAGAACCCAAAT
NGACAGACAAAGGTGCACCTCATTTATGCC
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