FC930392

Overview
NameFC930392
Unique NameFC930392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT4_TOBAC (Caffeoyl-CoA O-methyltransferase 4 OS=Nicotiana tabacum GN=CCOAOMT4 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.673e-62
Identity = 109/147 (74.15%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFLSML+KLINAKNTMEIGVFTGYSLLATA+A+PDDGKILA+DI +E+YE GLP+I+KAG+AHKI+F+EGPALP+LDQ+I+D KYHG++DF+FVDADK+NY+   +RLI
Sbjct:   26 QYILETSVYPREPEPMKELREITAKHPWNLMTTSADEGQFLSMLIKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRENYEIGLPVIEKAGLAHKIEFKEGPALPVLDQMIEDGKYHGSYDFIFVDADKDNYLNYHKRLI 172
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT4_ARATH (Probable caffeoyl-CoA O-methyltransferase At4g34050 OS=Arabidopsis thaliana GN=At4g34050 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.673e-62
Identity = 109/147 (74.15%), Postives = 134/147 (91.16%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+ML+KL+NAKNTMEIGV+TGYSLLATALA+P+DGKILA+D+ +E+YE GLPII+KAGVAHKIDFREGPALP+LD+++ DEK HGT+DF+FVDADK+NYI   +RLI
Sbjct:   43 QYILETSVYPREPESMKELREVTAKHPWNIMTTSADEGQFLNMLIKLVNAKNTMEIGVYTGYSLLATALALPEDGKILAMDVNRENYELGLPIIEKAGVAHKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLI 189
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT1_TOBAC (Caffeoyl-CoA O-methyltransferase 1 OS=Nicotiana tabacum GN=CCOAOMT1 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.673e-62
Identity = 109/147 (74.15%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFLSML+KLINAKNTMEIGVFTGYSLLATA+A+PDDGKILA+DI +E+YE GLP+I+KAG+AHKI+F+EGPALP+LDQ+I+D KYHG++DF+FVDADK+NY+   +RLI
Sbjct:   23 QYILETSVYPREPEPMKELREITAKHPWNLMTTSADEGQFLSMLIKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRENYEIGLPVIEKAGLAHKIEFKEGPALPVLDQMIEDGKYHGSYDFIFVDADKDNYLNYHKRLI 169
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT3_TOBAC (Caffeoyl-CoA O-methyltransferase 3 OS=Nicotiana tabacum GN=CCOAOMT3 PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.798e-62
Identity = 109/147 (74.15%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFLSMLLKLINAKNTMEIGVFTGYSLLATA+A+PDDGKILA+DI +++YE GLP+I+KAG+AHKI+F+EGPALP+LDQ+I+D KYHG++DF+FVDADK+NY+   +RLI
Sbjct:   26 QYILETSVYPREPEPMKELREITAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRDNYEIGLPVIEKAGLAHKIEFKEGPALPVLDQMIEDGKYHGSYDFIFVDADKDNYLNYHKRLI 172
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT6_TOBAC (Caffeoyl-CoA O-methyltransferase 6 OS=Nicotiana tabacum GN=CCOAOMT6 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.183e-62
Identity = 113/147 (76.87%), Postives = 132/147 (89.80%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RELT KHPW+ M T+ DE QFLSMLLKLI AKNTMEIGV+TGYSLLATALA+PDDGKILA+DI KE+YE GLP+IQKAGVAHKIDFREGPALP+LD +I+D+  HGT+DF+FVDADK+NYI   +R+I
Sbjct:   31 QYILETSVYPREPEPMKELRELTAKHPWNLMTTSADEGQFLSMLLKLIIAKNTMEIGVYTGYSLLATALALPDDGKILAMDINKENYELGLPVIQKAGVAHKIDFREGPALPVLDLMIEDKNNHGTYDFIFVDADKDNYINYHKRII 177
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT_MEDSA (Caffeoyl-CoA O-methyltransferase OS=Medicago sativa GN=CCOMT PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.928e-61
Identity = 110/147 (74.83%), Postives = 133/147 (90.48%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSV+PRE + +KE+RE+T KHPW+ M T+ DE QFLSMLLKLINAKNTMEIGV+TGYSLLATALAIP+DGKILA+DI KE+YE GLP+I+KAGV HKIDFREGPALP+LD++I+DEK HG++DF+FVDADK+NY+   +RLI
Sbjct:   31 QYILETSVFPREHEAMKELREVTAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLI 177
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT_EUCGU (Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gunnii PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.016e-60
Identity = 113/147 (76.87%), Postives = 132/147 (89.80%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGVFTGYSLLATALA+PDDGKILA+DI +E+YE GLP+IQKAGVA KIDFREGPALP+LDQLI+D K  G+FDF+FVDADK+NY+   +RLI
Sbjct:   31 QYILETSVYPREPEPMKELREITAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVFTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVADKIDFREGPALPILDQLIEDGK-QGSFDFIFVDADKDNYLNYHKRLI 176
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT_MESCR (Caffeoyl-CoA O-methyltransferase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.490e-60
Identity = 110/147 (74.83%), Postives = 131/147 (89.12%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+R++T KHPW+ M T+ DE QFL+MLLKLINAKNT+EIGV+TGYSLLA+ALA+PDDGKILA+DI +E+YE GLP+IQKAGVAHKIDFREGPALP+LD LI+D K HG+FDF FVDADK+NY    +RLI
Sbjct:   38 QYILETSVYPREPEPMKELRDITAKHPWNLMTTSADEGQFLNMLLKLINAKNTIEIGVYTGYSLLASALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIEDAKNHGSFDFAFVDADKDNYGNYHKRLI 184
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT_CITNA (Caffeoyl-CoA O-methyltransferase OS=Citrus natsudaidai PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.490e-60
Identity = 109/147 (74.15%), Postives = 131/147 (89.12%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+M LKLINAKNTMEIGV+T YSLLATALAIPDDGKILA+DI +E+YE GLP I+KAGVAH+I FREGPALP+LDQL++D+K HGT+DF+FVDADK+NYI   +R+I
Sbjct:   16 QYILETSVYPREPESMKELREVTAKHPWNLMRTSADEGQFLNMSLKLINAKNTMEIGVYTDYSLLATALAIPDDGKILAMDINRENYEIGLPKIEKAGVAHRIQFREGPALPVLDQLVEDKKNHGTYDFIFVDADKDNYINYHKRII 162
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT1_EUCGL (Caffeoyl-CoA O-methyltransferase 1 OS=Eucalyptus globulus GN=CCOMT PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.659e-60
Identity = 112/147 (76.19%), Postives = 132/147 (89.80%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            Q+ILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGVFTGYSLLATALA+PDDGKILA+DI +E+YE GLP+IQKAGVA KIDFREGPALP+LDQLI+D K  G+FDF+FVDADK+NY+   +RLI
Sbjct:   31 QHILETSVYPREPEPMKELREITAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVFTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVADKIDFREGPALPILDQLIEDGK-QGSFDFIFVDADKDNYLNYHKRLI 176
The following BLAST results are available for this feature:
BLAST of FC930392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT4_TOBAC3.673e-6274.15Caffeoyl-CoA O-methyltransferase 4 OS=Nicotiana ta... [more]
CAMT4_ARATH3.673e-6274.15Probable caffeoyl-CoA O-methyltransferase At4g3405... [more]
CAMT1_TOBAC3.673e-6274.15Caffeoyl-CoA O-methyltransferase 1 OS=Nicotiana ta... [more]
CAMT3_TOBAC4.798e-6274.15Caffeoyl-CoA O-methyltransferase 3 OS=Nicotiana ta... [more]
CAMT6_TOBAC8.183e-6276.87Caffeoyl-CoA O-methyltransferase 6 OS=Nicotiana ta... [more]
CAMT_MEDSA6.928e-6174.83Caffeoyl-CoA O-methyltransferase OS=Medicago sativ... [more]
CAMT_EUCGU2.016e-6076.87Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gun... [more]
CAMT_MESCR4.490e-6074.83Caffeoyl-CoA O-methyltransferase OS=Mesembryanthem... [more]
CAMT_CITNA4.490e-6074.15Caffeoyl-CoA O-methyltransferase OS=Citrus natsuda... [more]
CAMT1_EUCGL7.659e-6076.19Caffeoyl-CoA O-methyltransferase 1 OS=Eucalyptus g... [more]

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Properties
Property NameValue
Genbank descriptionC34007A11EF PostHarvC1 Citrus clementina cDNA clone C34007A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930392 ID=FC930392; Name=FC930392; organism=Citrus clementina; type=EST; length=705bp
GATGGTATTCTGTAAGTAATGGCTGCGAATCGGGAAGGTCAGGAGGAAAA
CAAGGATCGTTACTACAAAACTCTACATGGGAACAAGACCCTTTTACAGA
GTGAAAAACTTTATGAGGTGTATATATATACATACAAATTAAAACTACAC
ACTCTTTTTAATTTTCTGTTTCTTTAATTTAACTAAAATGTAGAATGGAA
TGTCTCAATTATGCCGGCTATTATAATTTCTCTATCTTGATTTCTTCTTA
TTAATTATATCTTGCAGTATATACTTGAAACCAGTGTATATCCAAGAGAA
CCACAATGCTTGAAGGAGATCCGCGAGTTGACGGACAAGCATCCATGGAG
CGCCATGATGACTGCACCTGATGAAGCACAATTTTTGAGCATGCTACTCA
AGCTTATCAATGCCAAGAATACCATGGAAATTGGCGTTTTCACTGGTTAC
TCTCTCCTAGCCACTGCCCTCGCCATTCCCGACGATGGCAAGATACTGGC
CCTGGACATCACCAAGGAACACTACGAGAAGGGTCTCCCTATAATTCAAA
AAGCTGGTGTTGCCCACAAGATTGATTTCAGAGAAGGCCCTGCTCTTCCT
CTTCTTGATCAATTGATCCAAGACGAAAAATATCATGGGACATTCGACTT
CGTCTTTGTTGATGCTGACAAGAATAACTACATTAAATTACCACAGAGGC
TTATT
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