FC930392

Overview
NameFC930392
Unique NameFC930392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21
Identity = 58/138 (42.03%), Postives = 84/138 (60.87%), Query Frame = 1
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNN 678
            QY+L  S+  RE   L+ +R LT + P    M   ++AQ L+ L +LI AK  +++G FTGYS LA ALA+P+ G+++  ++  E  + G P+ ++A V  KID R  PAL  LD+L+   +  GTFD   VDADK N
Sbjct:   56 QYLLSRSM--REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIKAKKALDLGTFTGYSALALALALPEAGRVVTCEVDAEPPKLGRPMWKQAEVEQKIDLRLQPALQTLDELLAAGE-AGTFDIAVVDADKEN 190          
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 50/128 (39.06%), Postives = 82/128 (64.06%), Query Frame = 1
Query:  298 EPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNY 681
            + + ++  +E  ++H    M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ E+ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y
Sbjct:   35 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGY 158          
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20
Identity = 49/128 (38.28%), Postives = 82/128 (64.06%), Query Frame = 1
Query:  298 EPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNY 681
            + + ++  +E  ++H    M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ ++ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y
Sbjct:   34 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGY 157          
The following BLAST results are available for this feature:
BLAST of FC930392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CMTD1_MOUSE7.008e-2142.03Catechol-O-methyltransferase domain-containing pro... [more]
CAMT2_DICDI2.039e-2039.06Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI4.543e-2038.28Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC34007A11EF PostHarvC1 Citrus clementina cDNA clone C34007A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930392 ID=FC930392; Name=FC930392; organism=Citrus clementina; type=EST; length=705bp
GATGGTATTCTGTAAGTAATGGCTGCGAATCGGGAAGGTCAGGAGGAAAA
CAAGGATCGTTACTACAAAACTCTACATGGGAACAAGACCCTTTTACAGA
GTGAAAAACTTTATGAGGTGTATATATATACATACAAATTAAAACTACAC
ACTCTTTTTAATTTTCTGTTTCTTTAATTTAACTAAAATGTAGAATGGAA
TGTCTCAATTATGCCGGCTATTATAATTTCTCTATCTTGATTTCTTCTTA
TTAATTATATCTTGCAGTATATACTTGAAACCAGTGTATATCCAAGAGAA
CCACAATGCTTGAAGGAGATCCGCGAGTTGACGGACAAGCATCCATGGAG
CGCCATGATGACTGCACCTGATGAAGCACAATTTTTGAGCATGCTACTCA
AGCTTATCAATGCCAAGAATACCATGGAAATTGGCGTTTTCACTGGTTAC
TCTCTCCTAGCCACTGCCCTCGCCATTCCCGACGATGGCAAGATACTGGC
CCTGGACATCACCAAGGAACACTACGAGAAGGGTCTCCCTATAATTCAAA
AAGCTGGTGTTGCCCACAAGATTGATTTCAGAGAAGGCCCTGCTCTTCCT
CTTCTTGATCAATTGATCCAAGACGAAAAATATCATGGGACATTCGACTT
CGTCTTTGTTGATGCTGACAAGAATAACTACATTAAATTACCACAGAGGC
TTATT
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