FC930394

Overview
NameFC930394
Unique NameFC930394
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 3
Query:  189 FEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGY-KSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA---NELADGYNKGTGLGAETIGTFVLVYTVF-SATDP 677
            F++    +  RA +AEFI+            I Y K  +D  L+T      G++ IA   G  +F+ V   A ISGGH+NPAVTFGL +G ++++I  + Y +AQ LG+   C  +K          GG A   + +A G     G+  E I TF LVYTV+ +A DP
Sbjct:    9 FDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTP-----GLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-------GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADP 164          
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15
Identity = 56/162 (34.57%), Postives = 77/162 (47.53%), Query Frame = 3
Query:  192 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAETIGTFVLVYTVFSATD 674
            +E+   +F +AV AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+VAQ +GAI G G +        N  G    N L +    G  +  E I TF L   +FS+TD
Sbjct:    3 KEVCSLAFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG--NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTD 151          
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14
Identity = 54/155 (34.84%), Postives = 78/155 (50.32%), Query Frame = 3
Query:  219 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAETIGTFVLVYTVF-SATDP 677
            +A +AEFIA            I Y   T D  L+       G++ +A A    +F+ V   A +SGGH+NPAVT GL +G  ++++  L Y +AQCLG+   C  +K       N      + +A G +   G+  E I TF LVYTV+ +A DP
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDP-----AGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVT----NGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADP 164          
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14
Identity = 54/162 (33.33%), Postives = 79/162 (48.77%), Query Frame = 3
Query:  192 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAETIGTFVLVYTVFSATD 674
            +E+   +F++AV AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+ AQ +GAI G G +  +  +  N  G    N L +    G  +  E I TF L   +FS+TD
Sbjct:    3 KEVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL--YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTD 151          
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14
Identity = 54/162 (33.33%), Postives = 80/162 (49.38%), Query Frame = 3
Query:  192 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAETIGTFVLVYTVFSATD 674
            +E+   +F++AV AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+ AQ +GAI G G +  +  +  N  G    N L++    G  +  E I TF L   +FS+TD
Sbjct:    3 KEVCSVAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGIL--YWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTD 151          
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.618e-14
Identity = 53/161 (32.92%), Postives = 77/161 (47.83%), Query Frame = 3
Query:  192 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAETIGTFVLVYTVFSATD 674
            +E+   +F +AV AEF+A            + + S               +L I+ AFG  I  +      +SGGH+NPA+T  L +G ++SL+RA+ Y+VAQ +GAI G   +      Y  R     N L +    G  + AE I TF L   VFS+TD
Sbjct:    3 KEVCSAAFLKAVFAEFLATLIFVFFGLGSALKWPSAMP-----------SVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTD 151          
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 51/154 (33.12%), Postives = 74/154 (48.05%), Query Frame = 3
Query:  219 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAETIGTFVLVYTVF-SATDP 677
            RA  AEF +            + Y   T     T      G++  + +    +F+ V   A +SGGH+NPAVTFG F+G  ++L+RA+LY +AQ LGA+  C  +K             A  L+ G      +  E + TF LVYTV+ +A DP
Sbjct:   21 RAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATP----AGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMET----AAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDP 166          
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14
Identity = 54/154 (35.06%), Postives = 73/154 (47.40%), Query Frame = 3
Query:  219 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAETIGTFVLVYTVF-SATDP 677
            +A +AEFIA            I Y   T            G++ IA A    +F+ V   A ISGGH+NPAVTFGL +G  ++++  +LY VAQ LGA   C     F   Y             G ++  G+  E + TF LVYTV+ +A DP
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGA----LDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVAC-----FLLQYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADP 163          
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14
Identity = 54/162 (33.33%), Postives = 78/162 (48.15%), Query Frame = 3
Query:  192 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAETIGTFVLVYTVFSATD 674
            +E+   +F +AV AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +G ++SL+RA  Y+ AQ +GAI G G +  +  +  N  G    N L +   +G  +  E I TF L   +F++TD
Sbjct:    3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTD 151          
BLAST of FC930394 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 58/157 (36.94%), Postives = 77/157 (49.04%), Query Frame = 3
Query:  219 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC---GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAETIGTFVLVYTVF-SATDP 677
            +A +AEFIA            I Y   T    N       G++ IA A    +F+ V   A ISGGH+NPAVTFGL +G  ++++  + Y VAQ LGA   C   GFV    K+       G +EL        G+  E + TF LVYTV+ +A DP
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFV-THGKAIPTHAVAGISEL-------EGVVFEVVITFALVYTVYATAADP 163          
The following BLAST results are available for this feature:
BLAST of FC930394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
TIP21_ARATH3.093e-1535.71Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQP5_PIG8.999e-1534.57Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
TIP_ANTMA2.005e-1434.84Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
AQP5_RAT2.005e-1433.33Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_MOUSE2.005e-1433.33Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_SHEEP2.618e-1432.92Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP13_ARATH4.466e-1433.12Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP23_MAIZE5.833e-1435.06Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQP5_HUMAN5.833e-1433.33Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP21_MAIZE7.618e-1436.94Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34007B01EF PostHarvC1 Citrus clementina cDNA clone C34007B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930394 ID=FC930394; Name=FC930394; organism=Citrus clementina; type=EST; length=677bp
GACCCATCATTAAACTCTGTAGCAACACAACAGTCGTAGCTCTTGTTTCT
CCCTCTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAAATGGGGAA
GGATGTTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCA
AGGACTACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTG
GGCAAGTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCT
TTTGTTTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGA
CTGATCCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGC
ATCGCTTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGC
CGGTATTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCT
TGGGGCGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAG
TGCTTGGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATC
ATACTACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACA
ACAAGGGCACCGGACTGGGTGCTGAGACCATCGGTACTTTCGTTCTTGTC
TACACTGTTTTCTCTGCCACTGATCCT
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