FC930400

Overview
NameFC930400
Unique NameFC930400
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_MOUSE (Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.131e-69
Identity = 128/244 (52.46%), Postives = 169/244 (69.26%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHNPTG+DP PEQW++IA V+++KN   FFD+AYQGFASG  D DA +VR F  +G+ + + QSY+KN+GLY ER+GA   V   ++
Sbjct:   56 NSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAE 299
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_HUMAN (Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 1.131e-69
Identity = 128/244 (52.46%), Postives = 169/244 (69.26%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++ VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  PTWGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHNPTG+DP PEQW++IA V++++N   FFD+AYQGFASG  D DA +VR F  +G+ + + QSY+KN+GLY ER+GA   V   +D
Sbjct:   56 NSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDAD 299
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_BOVIN (Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.478e-69
Identity = 128/244 (52.46%), Postives = 168/244 (68.85%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  PTWGNH  IF DA +    YRYYDPKT G DF G I DI   P  S ILLH CAHNPTG+DP PEQW+++A V+++ N   FFD+AYQGFASG  + DA +VR F  +G+ + + QSY+KN+GLY ER+GA   V   ++
Sbjct:   56 NSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIAGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQSYRYYDPKTCGFDFTGAIEDISKIPAQSVILLHACAHNPTGVDPRPEQWKEMATVVKKNNLFAFFDMAYQGFASGDGNKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAE 299
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_PONAB (Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.292e-69
Identity = 127/244 (52.05%), Postives = 169/244 (69.26%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++ VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHNPTG+DP PEQW++IA V++++N   FFD+AYQGFASG  D DA +VR F  +G+ + + QSY+KN+GLY ER+GA   V   +D
Sbjct:   56 NSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDAD 299
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_MACFA (Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis GN=GOT2 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.292e-69
Identity = 127/244 (52.05%), Postives = 169/244 (69.26%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++ VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHNPTG+DP PEQW++IA V++++N   FFD+AYQGFASG  D DA +VR F  +G+ + + QSY+KN+GLY ER+GA   V   +D
Sbjct:   56 NSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDAD 299
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_RAT (Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus GN=Got2 PE=1 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 2.787e-68
Identity = 126/244 (51.64%), Postives = 169/244 (69.26%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++ VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S +LLH CAHNPTG+DP PEQW+++A V+++KN   FFD+AYQGFASG  D DA +VR F  +G+ + + QSY+KN+GLY ER+GA   V   ++
Sbjct:   56 NSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAGKNLDKEYLPIGGLADFCKASAELALGENSEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEMAAVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAE 299
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_PIG (Aspartate aminotransferase, mitochondrial OS=Sus scrofa GN=GOT2 PE=1 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 6.209e-68
Identity = 125/244 (51.23%), Postives = 167/244 (68.44%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A  ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S ILLH CAHNPTG+DP PEQW+++A ++++ N   FFD+AYQGFASG  + DA +VR F  +G+ + + QSY+KN+GLY ER+GA   V   ++
Sbjct:   56 NSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGANFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLHSYRYYDPKTCGFDFTGALEDISKIPAQSVILLHACAHNPTGVDPRPEQWKEMATLVKKNNLFAFFDMAYQGFASGDGNKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAE 299
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_HORSE (Aspartate aminotransferase, mitochondrial OS=Equus caballus GN=GOT2 PE=1 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.024e-67
Identity = 124/244 (50.82%), Postives = 165/244 (67.62%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++  LK  R  TVQ +SGTG+LR+ A  ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G D  G + DI   P  S ILLH CAHNPTG+DP PEQW++IA ++++ N   FFD+AYQGFASG  + DA +VR F  +G+ + + QSY+KN+GLY ER+GA   V   +D
Sbjct:   27 NSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEALKSGRYVTVQSISGTGALRIGANFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGLQLHAYRYYDPKTCGFDVTGALEDISKIPQQSIILLHACAHNPTGVDPRPEQWKEIATLVKKNNLFAFFDMAYQGFASGDGNKDAWAVRYFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDAD 270
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_CHICK (Aspartate aminotransferase, mitochondrial OS=Gallus gallus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 8.965e-67
Identity = 119/244 (48.77%), Postives = 171/244 (70.08%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  + YVL+ V+KAE ++  +  +KEYLPI GLA F + +AEL  G ++   K  R  TVQG+SGTGSLR+ A  ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT  LDF G + DI   P  S ILLH CAHNPTG+DP  EQW+++A V++++N + +FD+AYQGFASG ++ DA ++R F  +G++++++QSY+KN+GLY ER GA   +   ++
Sbjct:   49 NSKKMNLGVGAYRDDNGKSYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAE 292
[Close]
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_XENTR (Aspartate aminotransferase, mitochondrial OS=Xenopus tropicalis GN=got2 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 8.391e-65
Identity = 119/244 (48.77%), Postives = 165/244 (67.62%), Query Frame = 1 
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F + +A+L  G +   ++  R  TVQ +SGTGSLR+ A  ++R++  ++ V +  P+WGNH  IF DA +    YRYYDPKT G DF G + DI   P  S IL H CAHNPTG+DP  EQW+++A +I+ +   PFFD+AYQGFASG  + DA +VR F   G+ ++++QSY+KN+GLY ER+GA   V S ++
Sbjct:   53 NSKKMNLGVGAYRDDNGKPYVLSSVRKAEAQLASKNLDKEYLPIGGLAEFARASAQLALGENCDAIQSGRFITVQTISGTGSLRVGANFLQRFYKYSRDVYLPKPSWGNHTPIFRDAGLEVKGYRYYDPKTCGFDFTGALDDISKIPEQSIILFHACAHNPTGVDPKQEQWKELAALIKSRRLFPFFDMAYQGFASGDTNRDAWAVRHFIQEGINVVLSQSYAKNMGLYGERVGAFTVVCSDAE 296
The following BLAST results are available for this feature:
BLAST of FC930400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AATM_MOUSE1.131e-6952.46Aspartate aminotransferase, mitochondrial OS=Mus m... [more]
AATM_HUMAN1.131e-6952.46Aspartate aminotransferase, mitochondrial OS=Homo ... [more]
AATM_BOVIN1.478e-6952.46Aspartate aminotransferase, mitochondrial OS=Bos t... [more]
AATM_PONAB3.292e-6952.05Aspartate aminotransferase, mitochondrial OS=Pongo... [more]
AATM_MACFA3.292e-6952.05Aspartate aminotransferase, mitochondrial OS=Macac... [more]
AATM_RAT2.787e-6851.64Aspartate aminotransferase, mitochondrial OS=Rattu... [more]
AATM_PIG6.209e-6851.23Aspartate aminotransferase, mitochondrial OS=Sus s... [more]
AATM_HORSE4.024e-6750.82Aspartate aminotransferase, mitochondrial OS=Equus... [more]
AATM_CHICK8.965e-6748.77Aspartate aminotransferase, mitochondrial OS=Gallu... [more]
AATM_XENTR8.391e-6548.77Aspartate aminotransferase, mitochondrial OS=Xenop... [more]

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Properties
Property NameValue
Genbank descriptionC34007B07EF PostHarvC1 Citrus clementina cDNA clone C34007B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930400 ID=FC930400; Name=FC930400; organism=Citrus clementina; type=EST; length=733bp
GATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACCGAAGAGCT
ACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCTTATGCTGG
AAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGGCTGCATTC
AATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCAGTGCTAAA
GGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGGTTCTCTTC
GGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAAAAGTACTA
ATATCATCTCCGACATGGGGTAACCACAAGAACATTTTCAATGATGCTAG
AGTTCCATGGTCTGAGTACCGCTACTATGATCCAAAAACAGTGGGTTTGG
ATTTTGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGTGGATCTTTT
ATTCTGCTTCATGGTTGTGCTCACAACCCAACTGGCATTGATCCAACCCC
TGAACAATGGGAAAAAATTGCTGATGTCATTCAAGAGAAAAATCATATTC
CATTTTTCGATGTTGCCTACCAGGGATTTGCAAGTGGAAGCCTTGACAAT
GATGCATCATCTGTGAGATTGTTTGCCACACGTGGCATGGAGCTTCTTGT
TGCTCAGTCATACAGTAAAAACCTTGGTCTTTATGCAGAAAGGATTGGAG
CAATGAAATGTGTCTGNTCGTCATCTGATTTAG
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