FC930402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.687e-29 Identity = 67/173 (38.73%), Postives = 111/173 (64.16%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTERQSE 640 N NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFSS+G+L+EY+ +S + ++RY + + ++ + E KL+ ++ ++ R+ +GE L +L+ KEL++LE +L+ I +RS+KN+ + I ++K++ LQ+ N L +I E E+ +++ + Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTGQQEGQ 185
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.509e-29 Identity = 67/173 (38.73%), Postives = 113/173 (65.32%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQ---FYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTER 631 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T+++Y+K C+ + ++ ++ + E KL+ ++ +Q R++LGE L +L KEL++LE +L+ + VR+ + + L+ ++ ++++E + N LR ++ E+ + ++ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK-CSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQ 184
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.509e-29 Identity = 67/173 (38.73%), Postives = 113/173 (65.32%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQ---FYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTER 631 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T+++Y+K C+ + ++ ++ + E KL+ ++ +Q R++LGE L +L KEL++LE +L+ + VR+ + + L+ ++ ++++E + N LR ++ E+ + ++ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK-CSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQ 184
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.509e-29 Identity = 67/162 (41.36%), Postives = 109/162 (67.28%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISE 607 N +RQVTF KRRNGLLKKAYELS+LCDAEVAL++FS GRLY+++++S + T++RY++ S + + T Q QE L+ + +Q R++LGE L+ L EL+ LE+++ + + ++RS+K ++LL E+ ++++E LQ+ N L+ ++ E Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.509e-29 Identity = 61/146 (41.78%), Postives = 103/146 (70.55%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREI 562 N T+RQVTF KRR+GL KKA ELS+LCDAEV L+VFSS RLY++A++S+++ I+RY + D + + + +QQEA LR+Q+ +Q +R +LG+ LS L+ ++L+NLE++LE + +R +K+ +++ +I+ + ++ + Sbjct: 13 NATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMN-ASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKVV 157
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.509e-29 Identity = 71/165 (43.03%), Postives = 108/165 (65.45%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKK---ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISE 607 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + + P A QQE KL+ + +Q R++LGE L L+ KEL+ LE +L+ + ++R+ + + +L ++ ++ +E L N LR R+++ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLAD 177
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 4.583e-29 Identity = 72/174 (41.38%), Postives = 111/174 (63.79%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTERQSES 643 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+ +++S+ T++RY+K D + + N+Q + E L R+I ++ R ++GE L + +EL+ LE +L++ + ++R+KK ++L E E ++++E L +N L + R R S S Sbjct: 13 NATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRND-NSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQGRGIIGRISSS 185
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 7.817e-29 Identity = 67/163 (41.10%), Postives = 108/163 (66.26%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENE 613 N RQVTF KR++GLLKKAYELSVLCDAEV+LI+FS+ G+LYE++N V TI+RY + C D+ E +TQ +QE TKL+ + + +R+++GE L ++ KEL+ LE +LE + R +K ++++ ++E + ++E +L + N L+ +++ Sbjct: 13 NKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYR-CKDNLLDNDTLE-DTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHD 173
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.971e-28 Identity = 65/165 (39.39%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENER 616 N NRQVTF KRR+GLLKKA+E+SVLCDAEVAL++FSS+G+L+EY+ +S + ++RY + + ++ + E KL+ ++ ++ R+ +GE L +L+ KEL++LE +L I +RS+KN+ + I ++K++ LQ+ N L +I E E+ Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREK 177
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 2.971e-28 Identity = 64/171 (37.43%), Postives = 112/171 (65.50%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTE 628 ++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FS+ +LY++A++SV++TI+R+ A + NP S +F+Q+EA LR+++ +Q R + G L+ L+ KEL+N+E++LE + +R K+ ++L EI+ + ++ + ++N+ L ++ + E Sbjct: 13 DSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQELMNPAS----EVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVE 179 The following BLAST results are available for this feature:
BLAST of FC930402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930402 ID=FC930402; Name=FC930402; organism=Citrus clementina; type=EST; length=649bpback to top |