FC930402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.797e-24 Identity = 63/170 (37.06%), Postives = 101/170 (59.41%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTE 628 N T+RQVTF KRR GLLKK +ELSVLCDA++ LI+FSS+G+L+EY + +S+ I RY + S + + Q Y E K+RR +Q + G+ LS ++EL LE +LE + ++R++K E++ ++E ++K E L+ +N + + N+ + E Sbjct: 16 NKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASL---PVEDNRVQLY-DEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLMNNQMYKQE 181
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.292e-23 Identity = 62/172 (36.05%), Postives = 102/172 (59.30%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQ--------QEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISEN 610 N TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S+R I+ Y+ T NT F + E T++R ++ ++ R G+ LS L ++ +LE +LE + +VR++K+++L +++ + ++E L++ N +L I+EN Sbjct: 13 NATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ------------TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINEN 172
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.687e-23 Identity = 60/169 (35.50%), Postives = 102/169 (60.36%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTER 631 N++NRQVT+ KRRNG+LKKA E+SVLCDA V++I+F+S G+++E+++ S+ +D+Y K + +A + E K+++ +Q RH+ GE +++LN +EL LE LE G+ +R+K+NE+L M K+ ++ + L ++ + E A R Sbjct: 13 NSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTG-----RRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVL----RMMRKKTQSMEEEQDQLNCQLRQLEIATMNR 172
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.093e-22 Identity = 58/169 (34.32%), Postives = 102/169 (60.36%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTER 631 N++NRQVT+ KRRNG+LKKA E+SVLCDA V++I+F+S G+++E+++ S+ +D+Y K + +A + E K+++ +Q RH+ GE +++LN +EL LE L+ G+ +R+K+N++L M K+ ++ + L ++ + E A R Sbjct: 13 NSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTG-----RRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLL----RMMRKKTQSMEEEQDQLNWQLRQLEIASMNR 172
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.428e-22 Identity = 64/166 (38.55%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSS-NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENER 616 N +RQVTFCKRR GLLKKA ELSVLCDA+V +I+FSS+G+L+E A N ++ ++RY+ A PG++ Q +Q LR +I +Q R G + +L LE LE I ++R+ K +M+ EI+F+ +E L+ N L+ ++ E ++ Sbjct: 13 NPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGAL--QRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKEQQK 176
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.426e-22 Identity = 71/205 (34.63%), Postives = 107/205 (52.20%), Query Frame = 2 Query: 137 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRY---KKACADSSNPGSI-----------TEANTQFY--------QQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARI------------SENERAQTERQSESMM 649 RQVTF KRR GL KKA EL+VLCDA+VAL+VFSS G+L ++A++++ ID+Y K + SI T N+ Y + + L Q+ E R + GE L L+ +EL+ +E LE G+ RV K++ + EI ++++ IQL +NM LR ++ +EN + + SES+M Sbjct: 17 RQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLAVPDTENVLTEDGQSSESVM 221
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.256e-22 Identity = 62/163 (38.04%), Postives = 99/163 (60.74%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILG-EALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISE 607 N +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ A ++ I+RYK A + +N + +QEA L+++I +Q R+I G A + +EL LE LE + +RS K ++++ EI+ ++ +E L+ N L+ +I E Sbjct: 13 NPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDP---KQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 9.256e-22 Identity = 62/163 (38.04%), Postives = 99/163 (60.74%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILG-EALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISE 607 N +RQVTFCKRR GLLKKA ELS+LC+A++ +I+FS+ G+LY+ A ++ I+RYK A + +N + +QEA L+++I +Q R+I G A + +EL LE LE + +RS K ++++ EI+ ++ +E L+ N L+ +I E Sbjct: 13 NPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRMDP---KQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.999e-21 Identity = 57/158 (36.08%), Postives = 99/158 (62.66%), Query Frame = 2 Query: 167 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTERQ 634 GLLKKA EL++LCDA++ +I+FSS G+++E+++ S+R IDRY+K S N + + N Q Y E T+++ +I ++Q RH GE L++L E+ LE +LE + +VRS+K ++L +++ + ++E L+ N L I ++ A E++ Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKL---SGNCAPVYD-NQQVYC-EITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYRVIQDHHAASMEQK 154
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.337e-20 Identity = 54/163 (33.13%), Postives = 95/163 (58.28%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRAT--IDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISE 607 N++NRQVT+ KRRNG++KKA E+SVLCDA V++I+F+S G+++E+ + S +D Y K + + + E +++++ +Q RH+ GE ++TLN+KEL LE LE G +++K+ E + M K ++ +N L+ ++ + Sbjct: 13 NSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGK-----RLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEF----VRMMRKHNEMVEEENQSLQFKLRQ 166 The following BLAST results are available for this feature:
BLAST of FC930402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930402 ID=FC930402; Name=FC930402; organism=Citrus clementina; type=EST; length=649bpback to top |