FC930402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20 Identity = 56/173 (32.37%), Postives = 98/173 (56.65%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN-NSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTERQSE 640 N ++RQVTF KRRNGL++KA +LSVLCDA VAL+V S+ G+LY +++ +++ +DRY K AD + +Q +A ++ ++ ++G + ++ L LE LE + R+KK E++L +E ++++E L+ +N L +++ N E + E Sbjct: 13 NKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHAD--------DLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQMENNHHVGAEAEME 177
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 55/165 (33.33%), Postives = 101/165 (61.21%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQQEAT------KLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRA 595 N +RQVTF KRR GLLKKA+E++VLCD +VA IVFS++G L+ YA++ ++ +++Y + S I E F + E + KLR +I ++ R+++G+ L +L ++++ LE +++ + +RS+K ++L+ + +EK+ +L+ + +RA Sbjct: 13 NEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEE----FPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKITELETLHTCIRA 173
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.889e-20 Identity = 55/167 (32.93%), Postives = 101/167 (60.48%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRA--TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERA 619 N++NRQVT+ KRRNG++KKA E++VLCDA+V+LI+F + G+++EY + S +D Y+K ++ + +A + E +++++ +Q RH+ GE +++LN KEL LE L G+ + +K++E+L + K + L+ ++ L+ + + E A Sbjct: 13 NSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQK-----TSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEIL----RMVRKNDQILEEEHKQLQYALHQKEMA 170
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.079e-20 Identity = 57/177 (32.20%), Postives = 98/177 (55.37%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA--NNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTERQSESMM 649 N NR VTF KRRNGL+KKA E++VLCDA+VALI+F+S G++ +Y + + A +D+Y+K + +A + E +++++ +Q RH+ GE + +LN K L +E +E G+ +VR + E+L+++ + E + + L ++ + E A MM Sbjct: 13 NANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGK-----KLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILISK----RRNEKMMAEEQRQLTFQLQQQEMAIASNARGMMM 180
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.079e-20 Identity = 55/146 (37.67%), Postives = 89/146 (60.96%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRAT--IDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKR 556 N TNRQVTF KRR GLLKKA EL++LCDA++ +IVFS G++YEY++ R DRY KA + + Q QE T+++ + ++ + R +G+ L++L +++ NLE ++E + +VR +K ++L ++ M R Sbjct: 13 NPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAPSTRFEEMDV----QQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMHSR 154
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.663e-20 Identity = 60/168 (35.71%), Postives = 100/168 (59.52%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSIT-EANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERA 619 N+TNRQVTF KRR+G+LKKA E+SVLCDAEV +++FSS G+LY+Y + S+ +++Y+ +N G I + + E +++++ +Q RH+ GE L++L KEL +E L+ GI V N+ L+ E + + L+++N L ++ + + A Sbjct: 13 NSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNV----NDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIA 170
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.930e-19 Identity = 52/153 (33.99%), Postives = 90/153 (58.82%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS--VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHI-------LGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKR 556 N TNRQVT+ KRR G++KKA EL+VLCDA+VA+I+FSS G+ +E+ + S ++ DRY++A T + ++ ++R + ++++NR++ +GE L L F EL+ LE ++ + VR +K ++ + E +K+ Sbjct: 13 NATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKK 153
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.299e-19 Identity = 51/153 (33.33%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV--RATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHI-------LGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKR 556 N TNRQVT+ KRRNGL KKA EL+VLCDA+V++I+ SS G+L+E+ + S+ + D Y+K + K++ Q+R+++ +NR++ +GE+L+ LN+++L+ L ++ + +R +K +++ +IE +K+ Sbjct: 13 NQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKT------------VGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKK 153
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.299e-19 Identity = 60/155 (38.71%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHI---LGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQN 574 N TNRQVT+ KRRNGL KKA+EL+VLCDA V++I+FSS +L+EY N + + +D Y+ + TQ+ + + TK R+ + +NL I LGE L L+ +EL+ LE +E VR +K + L +IE +K+ Q+ Sbjct: 13 NQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTI-------SDVDVWATQYERMQETK-RKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQD 159
BLAST of FC930402 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.578e-19 Identity = 61/175 (34.86%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 125 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSITEANTQFYQ--QEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQTERQS 637 N T RQVTF KRR GL+KK ELS+LCDA + LIVFS+ G+L E+ + N + IDRY +N + + + Q E LRR+ ++ R G L+++ EL LE +LE + +VR +KNE++ ++E + ++ L+ DN + + E+ A +Q+ Sbjct: 13 NQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYL-----HTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHEHRAAMEFQQA 182 The following BLAST results are available for this feature:
BLAST of FC930402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930402 ID=FC930402; Name=FC930402; organism=Citrus clementina; type=EST; length=649bpback to top |