FC930403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: HDMCP_MOUSE (Hepatocellular carcinoma down-regulated mitochondrial carrier homolog OS=Mus musculus GN=Hdmcp PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 61/205 (29.76%), Postives = 93/205 (45.37%), Query Frame = 3 Query: 168 MKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSN-------AVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQ-------QQRGLS-------PELL-----------KYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMF 686 M V+G++GGV P+D +K R+Q T Y GI HC R E V ++GL+ ++L ++ G+ F+ D+K K ++G +G++ + +P EV K+RLQ QQR S P L KY GP+HC + REEGL GL+ G++ ++R G + A F Sbjct: 1 MDFVAGAIGGVCGVAVGYPLDTVKVRIQ--TEAKYAGIWHCIRDTYRQERVWGFYRGLSLPVCTVSLVSSVSFGTYHHCLAHICRFRYGSTDAKPTKADIT---LSGCASGLVRVF-LTSPTEVAKVRLQTQTQAQTQQRRSSASWTSGAPALCPTPTACLEPRPKYSGPLHCLVTVAREEGLRGLYKGSSALLLREGHSFATYF 199
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: UCP1_DICGR (Mitochondrial brown fat uncoupling protein 1 OS=Dicrostonyx groenlandicus GN=UCP1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 53/171 (30.99%), Postives = 75/171 (43.86%), Query Frame = 3 Query: 168 MKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGT------YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRN 662 +K S + + P+D K RLQ+ G YKG++ T+++TEG L+ GL +LR+G Q F K + R+ AG G + A+ I P EVVK+RLQ Q L +Y G + R+I E LW G P +MRN Sbjct: 15 VKTFSAGISACLADIITFPLDTAKVRLQIQGEGQTSSTIRYKGVLGTITTLAKTEGWPKLYSGLPAGIQRQISFASLRIGLYDTVQEYFSSGKETPPTLGNRISAGLMTGGV-AVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTESFSTLWKGTTPNLMRN 184
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: SCMC2_RAT (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus GN=Slc25a25 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 54/187 (28.88%), Postives = 85/187 (45.45%), Query Frame = 3 Query: 147 KKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGLTP------------FATHLTLKYT--LRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGL--SPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMR 659 ++T+ + + V+GSL G + + P++V+KTR+ L TG Y G++ C + EGV A +KG P A + TLK T R N+ F G IS+ +A + P +V+ R+Q Q + +PE+ + I+R EG FGL+ G AP M+ Sbjct: 275 QETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASY------------PLALVRTRMQAQASIEGAPEVTMSS----LFKQILRTEGAFGLYRGLAPNFMK 445
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: SCMC2_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Mus musculus GN=Slc25a25 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 54/187 (28.88%), Postives = 85/187 (45.45%), Query Frame = 3 Query: 147 KKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGLTP------------FATHLTLKYT--LRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGL--SPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMR 659 ++T+ + + V+GSL G + + P++V+KTR+ L TG Y G++ C + EGV A +KG P A + TLK T R N+ F G IS+ +A + P +V+ R+Q Q + +PE+ + I+R EG FGL+ G AP M+ Sbjct: 275 QETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASY------------PLALVRTRMQAQASIEGAPEVTMSS----LFKQILRTEGAFGLYRGLAPNFMK 445
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: ODC_BOVIN (Mitochondrial 2-oxodicarboxylate carrier OS=Bos taurus GN=SLC25A21 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 59/182 (32.42%), Postives = 88/182 (48.35%), Query Frame = 3 Query: 177 VSGSLGGVVEACCLQPIDVIKTRLQLDTTGT----YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRL---MAGFGAGVLEALAIVTPFEVVKIRLQQQRGL---SPELLKYKGPIHCARMIIREE--GLFGLWAGAAPTVMRNGTNQAAMF 686 ++G G+VE C + P+DV+KTR Q+ T YK + + RTEG+ +KG+ P T K ++ + ++ G +S L +AG G+G+ EA+ +V PFEVVK+ LQ R P + Y AR II++E GL GL G T+ R+G F Sbjct: 18 LAGGSAGLVEICLMHPLDVVKTRFQIQRCTTDPNSYKSLGDSFRMIFRTEGLFGFYKGILPPILAETPKRAVKFFTFEQYKKLL-----GYVSLSPALTFAVAGLGSGLTEAI-VVNPFEVVKVGLQANRNRFTEQPSTMSY------ARHIIKKEGLGLGGLNKGFTATLGRHGVFNMVYF 187
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: MCATL_RAT (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Rattus norvegicus GN=Slc25a29 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 53/163 (32.52%), Postives = 75/163 (46.01%), Query Frame = 3 Query: 177 VSGSLGGVVEACCLQPIDVIKTRLQLDTTGT--YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMR 659 ++G GGV P D +K RLQ+ T Y+G +HC ++ + E V L+KGL LT L G A G+ S + +AG AG ++ + I P E+ K RLQ Q + YKG + C I R EGL G+ G T++R Sbjct: 6 LAGCAGGVAGVIVGHPFDTVKVRLQVQNTEKPQYRGTLHCFQSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRAL-----GQDSPLNQFLAGAAAGAIQCV-ICCPMELAKTRLQLQA--AGPARAYKGSLDCLVQIYRHEGLRGINRGMVSTLLR 160
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: YKQ9_SCHPO (Uncharacterized mitochondrial carrier C688.09 OS=Schizosaccharomyces pombe GN=SPAC688.09 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 54/185 (29.19%), Postives = 87/185 (47.03%), Query Frame = 3 Query: 177 VSGSLGGVVEACCLQPIDVIKTRLQLDT----TGTYKGIIHCGATVSRTEGVRALWKGLTPFATHL---TLKYTL-RMGSNAVFQSAFKDSKTG-------KISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMF 686 ++ ++ GV+ + PI ++KTRLQLD Y+ I C R EG R L+KGL+ + TL++ L +AV + + G K+ + G + G G A I P EVV+ RL+Q ++ KY G I C +++ E+G+ GL+ G ++R N +F Sbjct: 167 MAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVGESTLQWVLYEKFKHAVAIRQLRRKELGIQETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLRQSPSINGTP-KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: UCP1_MESAU (Mitochondrial brown fat uncoupling protein 1 OS=Mesocricetus auratus GN=UCP1 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 50/153 (32.68%), Postives = 71/153 (46.41%), Query Frame = 3 Query: 222 PIDVIKTRLQLDTTGT------YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRN 662 P+D K RLQ+ G YKG++ T+++TEG+ L+ GL +LR+G Q F K + R+ AG G + A+ I P EVVK+RLQ Q L +Y G + R+I E LW G P ++RN Sbjct: 33 PLDTAKVRLQIQGEGQISSTIRYKGVLGTITTLAKTEGLPKLYSGLPAGIQRQISFASLRIGLYDTVQEYFSSGKETPPTLGNRISAGLMTGGV-AVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTESFSTLWKGTTPNLLRN 184
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 50/187 (26.74%), Postives = 90/187 (48.13%), Query Frame = 3 Query: 147 KKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGLTP------------FATHLTLK--YTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGL--SPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMR 659 ++T+ + + V+GSL GV+ + P++V+KTR+ L TG Y+G++ CG + EG+ A +KG P A + TLK + R +++ F G +S+ +A + P +V+ R+Q + + +P++ K + I++ EG FGL+ G AP M+ Sbjct: 320 QETLGIHERFVAGSLAGVIAQSSIYPMEVLKTRMALRKTGQYQGVLDCGKKILLQEGLSAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYATSSADPGVFVLLACGTVSSTCGQLASY------------PLALVRTRMQAEASVEGAPQMTMSK----LFKHIVKTEGAFGLYRGLAPNFMK 490
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 59/184 (32.07%), Postives = 86/184 (46.74%), Query Frame = 3 Query: 156 IPPYMKAVSGSLGGVVEACCLQ----PIDVIKTRLQLD----------TTGTYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGS-NAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRN 662 +PP A LG AC P+D K RLQ+ + Y+G++ T+ R EG R+L+ GL ++R+G ++V K S+ I + RL+AG G L A+A+ P +VVK+R Q Q +Y+ + + I REEGL GLW G +P V RN Sbjct: 9 VPP--TATVKFLGAGTAACIADLITFPLDTAKVRLQIQGERRGPVQAAASAQYRGVLGTILTMVRNEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYTKGSEHAGIGS--RLLAGSTTGAL-AVAVAQPTDVVKVRFQAQARAGGGR-RYRSTVDAYKTIAREEGLRGLWKGTSPNVARN 186 The following BLAST results are available for this feature:
BLAST of FC930403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930403 ID=FC930403; Name=FC930403; organism=Citrus clementina; type=EST; length=707bpback to top |