FC930403

Overview
NameFC930403
Unique NameFC930403
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: MFTC_MACFA (Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 51/179 (28.49%), Postives = 83/179 (46.37%), Query Frame = 3
Query:  165 YMKAVSGSLGGVVEACCLQPIDVIKTRLQ----LDTTGTYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIR--LQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAM 683
            Y   V+G  GGV+    L P+D++K R      L+    Y GI+HC  T+ + +G+R L++G+TP      L + L        +S   + +  ++     L++   AG +  L I  P  V K R  LQ    ++    +YKG       I + EG+ GL+ G  P +   GT+  A+
Sbjct:   23 YENLVAGVSGGVLSNLALHPLDLVKIRFAVSDGLELRPKYNGILHCLTTIWKLDGLRGLYQGVTPNVWGAGLSWGLYFFFYNAIKSYKTEGRAERLEATEYLVSAAEAGAM-TLCITNPLWVTKTRLMLQYDAVINSPHRQYKGMFDTLVKIYKYEGVRGLYKGFVPGLF--GTSHGAL 198          
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: MFRN_DICDI (Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 57/203 (28.08%), Postives = 90/203 (44.33%), Query Frame = 3
Query:  162 PYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGLTP------------FATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQ--GRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGL--------SPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAF 704
            P    ++G++  +       P+DV+K RLQL  T  YKG+  C   +   EG+R  + G T             FA++ +LK         + Q  F +    + S Q    L+AG GAG+L A A   PF+VVK RLQ Q           +  + +Y G +   + I  EEG+ G   G  P ++ +  + A +++    F
Sbjct:  110 PIKVGIAGAIATMTSEAVASPMDVVKQRLQLQIT-DYKGLTDCTKRIWVKEGIRGFYSGYTTTLVMNVPYNIVYFASYESLK--------KIIQPWFNNKNPEERSYQLIDHLVAGGGAGML-AAAFTNPFDVVKTRLQTQSDFIASSTINSAKSIKRYGGMMDAMKTIWIEEGMDGYLRGMKPRMVFHSMSSAIVWSVYEYF 302          
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: S2538_ASPFU (Solute carrier family 25 member 38 homolog OS=Aspergillus fumigatus GN=AFUA_4G12340 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 57/205 (27.80%), Postives = 90/205 (43.90%), Query Frame = 3
Query:  105 SMDNKREQNPSPVPKKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGL-------TPFATHLTLKYTL---RMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFT 689
            S D K   + S +PK  +  +    +G++        + P+ V+K R + D    Y+ +   G  + RTEGVR L+ G         P+A    L Y     R+   A  + + +  K+   S+   +  G  AG+  A AI  PF+ VK RLQ   G      KY   I   R++IRE+G+  L+ G    + R   + A  +T
Sbjct:  106 SSDGKSRTSSSALPK--LSNWGNLATGAVARTAAGFVMMPVTVLKVRYESDYYA-YRSLYSAGRDIVRTEGVRGLFSGFGATAARDAPYAGLYVLFYEQLKRRLALVASSEQSEQPLKSTSSSSINFVSGGLAAGL--ATAITNPFDAVKTRLQLMPG------KYGNMIRAVRLMIREDGVRSLFGGLGLRITRKALSSALAWT 299          
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: S2538_ASPFC (Solute carrier family 25 member 38 homolog OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_069300 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 57/205 (27.80%), Postives = 90/205 (43.90%), Query Frame = 3
Query:  105 SMDNKREQNPSPVPKKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGL-------TPFATHLTLKYTL---RMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFT 689
            S D K   + S +PK  +  +    +G++        + P+ V+K R + D    Y+ +   G  + RTEGVR L+ G         P+A    L Y     R+   A  + + +  K+   S+   +  G  AG+  A AI  PF+ VK RLQ   G      KY   I   R++IRE+G+  L+ G    + R   + A  +T
Sbjct:  106 SSDGKSRTSSSALPK--LSNWGNLATGAVARTAAGFVMMPVTVLKVRYESDYYA-YRSLYSAGRDIVRTEGVRGLFSGFGATAARDAPYAGLYVLFYEQLKRRLALVASSEQSEQPLKSTSSSSINFVSGGLAAGL--ATAITNPFDAVKTRLQLMPG------KYGNMIRAVRLMIREDGVRSLFGGLGLRITRKALSSALAWT 299          
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 52/186 (27.96%), Postives = 80/186 (43.01%), Query Frame = 3
Query:  150 KTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGT----YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLK-YKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTA 692
            +T P  +K + G L G+     +QP+D++K R+QL   G     YK   H   ++ + EG+R ++ GL+          T R+G   V       +         + + G  AG   A  + TP EV  IR+     L  +  + YK   +    I REEG+  LW G  PT+ R     AA   +
Sbjct:   17 RTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAF-VGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLAS 201          
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 46/167 (27.54%), Postives = 75/167 (44.91%), Query Frame = 3
Query:  168 MKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGL-SPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNG 665
            +  V G L GV+ +    P DV+K R+Q   +    G+I    ++ + EG R LWKG++  A    +   + +    + +     S     +     ++ F  G++ ALA   P +VV+ R+  QR L       YKG + C     + EG F L+ G  P  +R G
Sbjct:  108 VNVVCGILSGVISSAIANPTDVLKIRMQAQNSAVQGGMIDSFMSIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVATHFLSSFTCGLVGALA-SNPVDVVRTRMMNQRALRDGRCAGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLG 273          
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: GHC1_HUMAN (Mitochondrial glutamate carrier 1 OS=Homo sapiens GN=SLC25A22 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 3
Query:  171 KAVSGSLGGVVEACCLQPIDVIKTRLQLDTTG--TYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTG-KISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTV 653
            K ++G + G++   C+ PID+ KTRLQ    G   Y  +  C     R+EG   +++G     T +T +  +++ +N  F+     SK G K++    ++AG GAG  + + + TP E++KI+LQ             G I   R I+  +G      GA P+V
Sbjct:   11 KLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSEGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQL--SKDGQKLTLLKEMLAGCGAGTCQVI-VTTPMEMLKIQLQD-----------AGRIAAQRKILAAQGQLSAQGGAQPSV 160          
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: CMC2_MACFA (Calcium-binding mitochondrial carrier protein Aralar2 OS=Macaca fascicularis GN=SLC25A13 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 51/167 (30.54%), Postives = 81/167 (48.50%), Query Frame = 3
Query:  183 GSLGGVVEACCLQPIDVIKTRLQLD-TTGT------YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRN 662
            GS+ G V A  + PID++KTR+Q   +TG+      YK    C   V R EG   L++GL P    +  +  +++  N   +  F   K G +     ++AG  AG  + +    P E+VKIRLQ    ++       GP   A  ++R+ G FG++ GA    +R+
Sbjct:  335 GSVAGAVGATAVYPIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDKFM-HKDGSVPLAAEILAGGCAGGSQVI-FTNPLEIVKIRLQVAGEIT------TGPRVSALSVVRDLGFFGIYKGAKACFLRD 493          
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: CMC2_HUMAN (Calcium-binding mitochondrial carrier protein Aralar2 OS=Homo sapiens GN=SLC25A13 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 51/167 (30.54%), Postives = 81/167 (48.50%), Query Frame = 3
Query:  183 GSLGGVVEACCLQPIDVIKTRLQLD-TTGT------YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRN 662
            GS+ G V A  + PID++KTR+Q   +TG+      YK    C   V R EG   L++GL P    +  +  +++  N   +  F   K G +     ++AG  AG  + +    P E+VKIRLQ    ++       GP   A  ++R+ G FG++ GA    +R+
Sbjct:  335 GSVAGAVGATAVYPIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDKFM-HKDGSVPLAAEILAGGCAGGSQVI-FTNPLEIVKIRLQVAGEIT------TGPRVSALSVVRDLGFFGIYKGAKACFLRD 493          
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: CMC1_MOUSE (Calcium-binding mitochondrial carrier protein Aralar1 OS=Mus musculus GN=Slc25a12 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 56/193 (29.02%), Postives = 91/193 (47.15%), Query Frame = 3
Query:  117 KREQNPS---PVPKKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGT--------YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRN 662
            +R+Q+P    P+  +      +   GS+ G V A  + PID++KTR+Q +  GT        YK    C   V R EG   L++GL P    +  +  +++  N   +  F   + G I     ++AG  AG  + +    P E+VKIRLQ    ++       GP   A  ++++ GLFGL+ GA    +R+
Sbjct:  308 QRQQSPGLGRPIWLQIAESAYRFTLGSVAGAVGATAVYPIDLVKTRMQ-NQRGTGSVVGELMYKNSFDCFKKVLRYEGFFGLYRGLIPQLIGVAPEKAIKLTVNDFVRDKF-TKRDGSIPLPAEILAGGCAGGSQVI-FTNPLEIVKIRLQVAGEIT------TGPRVSALNVLQDLGLFGLYKGAKACFLRD 491          
The following BLAST results are available for this feature:
BLAST of FC930403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
MFTC_MACFA2.951e-1128.49Mitochondrial folate transporter/carrier OS=Macaca... [more]
MFRN_DICDI2.951e-1128.08Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=... [more]
S2538_ASPFU3.855e-1127.80Solute carrier family 25 member 38 homolog OS=Aspe... [more]
S2538_ASPFC3.855e-1127.80Solute carrier family 25 member 38 homolog OS=Aspe... [more]
M2OM_HUMAN3.855e-1127.96Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
KMCP1_MOUSE3.855e-1127.54Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
GHC1_HUMAN3.855e-1129.27Mitochondrial glutamate carrier 1 OS=Homo sapiens ... [more]
CMC2_MACFA3.855e-1130.54Calcium-binding mitochondrial carrier protein Aral... [more]
CMC2_HUMAN3.855e-1130.54Calcium-binding mitochondrial carrier protein Aral... [more]
CMC1_MOUSE3.855e-1129.02Calcium-binding mitochondrial carrier protein Aral... [more]

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Properties
Property NameValue
Genbank descriptionC34007B11EF PostHarvC1 Citrus clementina cDNA clone C34007B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930403 ID=FC930403; Name=FC930403; organism=Citrus clementina; type=EST; length=707bp
ATAACAAACACTCAGGAGGGAAGCAAGAAGAAGAGAAGCAATTCCCAGAA
GCACTTCTCTTCTTCTTCTCCAACTTCCCACTGTAAGCTTTTGGACACTT
GTTTTCTATGGATAATAAGCGAGAGCAAAACCCGAGCCCGGTTCCGAAGA
AGACGATCCCACCGTACATGAAAGCGGTGTCGGGTTCTCTCGGAGGGGTC
GTGGAGGCTTGTTGCTTGCAGCCAATCGACGTCATCAAGACGAGGTTACA
GCTGGACACAACTGGGACTTACAAGGGAATTATCCACTGCGGCGCCACCG
TTTCGCGTACCGAAGGCGTGCGGGCTCTGTGGAAAGGATTGACGCCGTTT
GCCACCCACTTGACCTTAAAGTACACGCTTCGAATGGGATCGAATGCCGT
GTTTCAATCGGCGTTTAAGGATTCTAAAACGGGGAAGATTAGCAATCAGG
GTCGGCTAATGGCTGGCTTTGGTGCTGGTGTGCTTGAAGCTCTCGCTATT
GTTACTCCTTTTGAGGTGGTGAAAATTAGACTACAACAGCAGAGAGGTTT
GAGTCCTGAGCTTCTAAAGTACAAGGGTCCTATACACTGTGCTCGTATGA
TCATCCGTGAGGAAGGACTCTTTGGACTCTGGGCAGGGGCTGCCCCAACT
GTTATGCGCAATGGGACAAACCAAGCTGCCATGTTTACGGCTAAAAATGC
TTTTGAT
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