FC930405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_LACC3 (Elongation factor Tu OS=Lactobacillus casei (strain ATCC 334) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21 Identity = 72/200 (36.00%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 689 + K H+NI IGHVD GK+T T I K + E+ +A + YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P + + EGD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLSEKGLAKAQD-------YASI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYIVVFLNKTDLVD---DPELIDLVEMEVRELLSEYDYPGDDIPVIRGSALKALEGD 183
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_APPPP (Elongation factor Tu OS=Apple proliferation phytoplasma GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21 Identity = 66/190 (34.74%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 665 ++K H+N+ IGHVD GK+T T + L K AE +S+ +DK K E+ERGITI+ +ET K + +D PGH D++KNMITG +Q D +L++ + G QTREH LLA +G+ ++I NK D + + +V+ EV L + ++ +K PFV Sbjct: 8 RDKVHVNVGTIGHVDHGKTTLTAAITKILS----------TKGLAE--NKSYDQ---IDKTKEEKERGITINTTHVSYETVKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVSAYHGVMP-------QTREHVLLAGQVGISKLIVFLNKCDLV----KEEEWIHLVEMEVRELLNEYKFDGDKTPFV 171
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_ANAVT (Elongation factor Tu OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21 Identity = 67/214 (31.31%), Postives = 110/214 (51.40%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLTGTGVHP 737 + K H+NI IGHVD GK+T T + L + + V + +++ +D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D A E+V+ E+ L + ++ + +P V SG + +++ ++ T G +P Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAVAKGYDQ---------------IDNAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVGVPKLVVFLNKED----MMEDAELLELVELELRELLTEYEFDGDDIPIVRGSGLQALDVMTKNPK-TQRGENP 194
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_ANADE (Elongation factor Tu OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tuf1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21 Identity = 67/200 (33.50%), Postives = 96/200 (48.00%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 689 + K H+N+ IGHVD GK+T T + K A+ F +DK ERERGITI A +++T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D K D + EV L + + ++P V + EGD Sbjct: 8 RSKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAQKGGAQFLAYDQIDKAPEERERGITIATAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLDLVELEVRELLSEYDFPGNEIPIVKGSALKALEGD 182
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBL (Elongation factor Tu OS=Acidobacteria bacterium (strain Ellin345) GN=tuf1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21 Identity = 67/189 (35.45%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K H+N+ IGH+D GK+T T + L K ++ RSF +D ERERGITI A ++ET + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK DA D + EV L K G+ + +P V Sbjct: 8 RSKPHVNVGTIGHIDHGKTTLTAAITKVLS-----------KHNPKIAFRSFDS---IDNAPEERERGITIATAHVEYETANRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYVVVFLNKCDAVE---DAELIDLVEMEVRELLNKYGFPGDDLPVV 172
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU2_STRAW (Elongation factor Tu 2 OS=Streptomyces avermitilis GN=tuf2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21 Identity = 69/200 (34.50%), Postives = 98/200 (49.00%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGD 689 + K H+NI +GHVD GK+T T + K AE +F +D+ E RGITI+IA ++ET + +D PGH D++KNM+TG +Q D A+L++ + G QT EH LLA +GV ++ NK DA + + D + EV L GY + VP V +SG EGD Sbjct: 8 RTKPHLNIGTMGHVDHGKTTLTAAIT---------------KVLAERGSGTFVPFDRIDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRELLTAHGYGGDSVPVVRVSGLKALEGD 181
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_SULMW (Elongation factor Tu OS=Sulcia muelleri (strain GWSS) GN=tuf PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21 Identity = 64/193 (33.16%), Postives = 97/193 (50.26%), Query Frame = 3 Query: 90 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 665 I ++K H+NI IGHVD GK+T T + L V + F +D E+ERGITI+ + +++T + +D PGH D++KNM+TG +Q D A+L++ +T G QTREH LLA +GV ++ NK+D K E+V+ E+ L K Y+ E +P + Sbjct: 5 IFRRDKPHLNIGTIGHVDHGKTTLTASITKVLAKKGLAVAKEFSS---------------IDNAPEEKERGITINTSHVEYQTEIRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPNLVVFMNKVDQVDDK----EILELVEIEIRELLSKYEYDGENIPII 171
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_SACEN (Elongation factor Tu OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tuf PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21 Identity = 72/200 (36.00%), Postives = 102/200 (51.00%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 689 ++K H+NI IGHVD GK+T T + L DK E+N F +DK E++RGITI IA +++T K + +DAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + + VP V +S EGD Sbjct: 8 RDKPHVNIGTIGHVDHGKTTLTAAITKVLH--DKH---------PELNP--FTPFDEIDKAPEEKQRGITIQIAHVEYQTEKRHYAHVDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEEIIELVEMEVRELLSAQEFPGDDVPVVRVSALKALEGD 184
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_PHYMT (Elongation factor Tu OS=Phytoplasma mali (strain AT) GN=tuf PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21 Identity = 66/190 (34.74%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 665 ++K H+N+ IGHVD GK+T T + L K AE +S+ +DK K E+ERGITI+ +ET K + +D PGH D++KNMITG +Q D +L++ + G QTREH LLA +G+ ++I NK D + + +V+ EV L + ++ +K PFV Sbjct: 8 RDKVHVNVGTIGHVDHGKTTLTAAITKILS----------TKGLAE--NKSYDQ---IDKTKEEKERGITINTTHVSYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVSAYHGVMP-------QTREHVLLAGQVGISKLIVFLNKCDLV----KEEEWIHLVEMEVRELLNEYKFDGDKTPFV 171
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_OENOB (Elongation factor Tu OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=tuf PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21 Identity = 71/200 (35.50%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 689 + K H+NI IGHVD GK+T T I K + E+ +A + YA + D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + + + +P + + +GD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLSEKGLAQAQD-------YASI-DAAPEERERGITINTAHVEYETDKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKTDLVD---DPELIDLVEMEVRELLSEYDFPGDDIPIIRGSALKALQGD 183 The following BLAST results are available for this feature:
BLAST of FC930405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930405 ID=FC930405; Name=FC930405; organism=Citrus clementina; type=EST; length=737bpback to top |