FC930405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_MYCLB (Elongation factor Tu OS=Mycobacterium leprae (strain Br4923) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 76/211 (36.02%), Postives = 110/211 (52.13%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD-NMIERSTNL 716 + K H+NI IGHVD GK+T T I K + ++F +N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD +E T L Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFPN----LNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVESVTQL 193
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_MYCHP (Elongation factor Tu OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=tuf PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 66/205 (32.20%), Postives = 103/205 (50.24%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIER 704 + K H+NI IGHVD GK+T T + L +K AE YA + D E+ RGITI+ + +++T K + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK+D + + +V S L + G++ + P + + +GD E+ Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIATVLA----------KKGLAEARD----YASI-DNAPEEKARGITINTSHIEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPKIVVFLNKIDMFKDDEREEMVGLVEMDVRSLLSEYGFDGDNAPIIAGSALKALQGDPEYEK 190
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_LEUMM (Elongation factor Tu OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 67/200 (33.50%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 689 + K H+NI IGHVD GK+T T I K + E+ +A + + +D E+ERGITI+ + ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + + + +P + + EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLAEKQGVDATDFAE--------IDNAPEEKERGITINTSHIEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYLVVFLNKTDLVD---DEELVELVEMEVRELLSEYDFPGDDIPVLKGSALKALEGD 182
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_LACPL (Elongation factor Tu OS=Lactobacillus plantarum GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 71/202 (35.15%), Postives = 100/202 (49.50%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLG--GIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 689 + K H+NI IGHVD GK+T T + L G+ K E++ A +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + + + +P + + EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITKVLASKGLAK------EQDFAS-----------IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYIVVFLNKTDLVD---DDELVDLVEMEVRELLSEYDFPGDDIPVIRGSALKALEGD 182
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_KINRD (Elongation factor Tu OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 69/200 (34.50%), Postives = 102/200 (51.00%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 689 + K H+NI IGH+D GK+T T I + + ++F E+NK S +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH +LA +GV ++ NK D + + + EV L + + VP V +S EGD Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITRVLHDKFP----ELNKASAFDQ--IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVILARQVGVPYIVVALNKADMVE---DEELLELVEMEVRELLSSYEFPGDDVPVVRVSALKALEGD 184
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 64/200 (32.00%), Postives = 96/200 (48.00%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 689 + K H+NI IGHVD GK+T T + L G + + F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P + + EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITKVLAGKGQAEFKAFDQ---------------IDNAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALEGD 182
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_CYAME (Elongation factor Tu, chloroplastic OS=Cyanidioschyzon merolae GN=tufA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 64/190 (33.68%), Postives = 95/190 (50.00%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K H+NI IGHVD GK+T T + L D V +++FE+ +D ER RGITI+ + +++T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L K + + +PFV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAISAVLASKDNTVQLKKFEE---------------IDSAPEERARGITINTSHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPSIVVFLNKADMVD---DPELLELVELEVRELLSKYDFPGDTIPFV 172
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU2_STRRA (Elongation factor Tu-2 OS=Streptomyces ramocissimus GN=tuf2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 71/206 (34.47%), Postives = 102/206 (49.51%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERS 707 + K H+NI IGH+D GK+T T I K + +RF + F +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + + VP V +S EGD RS Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDRFP------DLNPFTPFDQIDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKTDMVD---DEEILELVELEVRELLTEYEFPGDDVPVVKVSALRALEGDPRWTRS 190
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: NODQ_AZOBR (Bifunctional enzyme nodQ OS=Azospirillum brasilense GN=nodQ PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.494e-21 Identity = 62/200 (31.00%), Postives = 104/200 (52.00%), Query Frame = 3 Query: 114 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERS 707 + + G VD GKST G L++ G I +E+ +++ + ++ ++D L+AERE+ ITID+A F T + V DAPGH + +NM T S A AVL++D+ G QTR HA++A +G++ ++ NKMD + + + I + + + +G+ V +P+S GDN++ RS Sbjct: 10 LRFLTCGSVDDGKSTLIGRLLHDAGLISDDQLEQARRDSRGRAEEDGGIDFSLLVDGLEAEREQSITIDVAYRYFATDRRSFIVADAPGHEQYTRNMATAASGASLAVLLVDARKGLLT-------QTRRHAIVASLMGIRHVVLAVNKMDLV--EDGETVFAAIRQAFTVFSAPLGF--RSVTAIPLSARHGDNVVHRS 198
BLAST of FC930405 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.494e-21 Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 683 + K H+NI IGHVD GK+T T + L + ++ + +D ERERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P + +SG + Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLAKKGQAQVQNYAD---------------IDGAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPVIQVSGLK 177 The following BLAST results are available for this feature:
BLAST of FC930405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930405 ID=FC930405; Name=FC930405; organism=Citrus clementina; type=EST; length=737bpback to top |