FC930411

Overview
NameFC930411
Unique NameFC930411
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.379e-39
Identity = 72/111 (64.86%), Postives = 87/111 (78.38%), Query Frame = 1
Query:  322 FELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWKS 654
            F+   + AAT+NF  SNKLG GGFG V+KG    G E+AVKRLS  SGQG EEFKNEVLL+AKLQHRNL +LLG  +E +EK+LVYE+MPNKSLDYF+FD  R+  LDW++
Sbjct:  323 FDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRT 433          

HSP 2 Score: 32.3426 bits (72), Expect = 1.379e-39
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  654 RFDIILGIARGVLYLHQD 707
            R++II G+ RG+LYLHQD
Sbjct:  434 RYNIIRGVTRGILYLHQD 451          
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.797e-39
Identity = 79/146 (54.11%), Postives = 102/146 (69.86%), Query Frame = 1
Query:  226 LLFLNSSTRLSDREASTSAKRNKDTGNVDVTF-----FELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDW 648
            LL    S R  ++      +   + GN D+T      F+   + AAT+ F   NKLGQGGFG VYKG L++G ++AVKRLS TSGQG +EF+NEV+++AKLQHRNL KLLG CLE +EK+LVYEF+PNKSLD+F+FD + K  LDW
Sbjct:  278 LLVAVFSVRAKNKRTLNEKEPVAEDGN-DITTAGSLQFDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDW 422          

HSP 2 Score: 33.4982 bits (75), Expect = 1.797e-39
Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 3
Query:  651 KRFDIILGIARGVLYLHQD 707
            +R+ II GIARG+LYLHQD
Sbjct:  424 RRYKIIGGIARGILYLHQD 442          
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.042e-39
Identity = 70/109 (64.22%), Postives = 88/109 (80.73%), Query Frame = 1
Query:  322 FELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDW 648
            F+   ++AAT+NF   NKLGQGGFG VYKG   +G ++AVKRLS TSGQG  EF+NEV+++AKLQHRNL +LLG CLE +EK+LVYEF+ NKSLDYF+FD + K+ LDW
Sbjct:  496 FDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDW 604          

HSP 2 Score: 33.4982 bits (75), Expect = 3.042e-39
Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 3
Query:  651 KRFDIILGIARGVLYLHQD 707
            +R+ II GIARG+LYLHQD
Sbjct:  606 RRYKIIGGIARGILYLHQD 624          
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.050e-39
Identity = 70/108 (64.81%), Postives = 89/108 (82.41%), Query Frame = 1
Query:  322 FELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLD 645
            F+  T+ AATD FS +NKLG+GGFG VYKG L    E+AVKRLS+ SGQG +EFKNEV+++AKLQH+NL +LLG CLE+DE++LVYEF+PNKSL+YF+F   +K LLD
Sbjct:  309 FDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLD 416          

HSP 2 Score: 33.113 bits (74), Expect = 3.050e-39
Identity = 14/27 (51.85%), Postives = 22/27 (81.48%), Query Frame = 3
Query:  627 KEAIVGLEKRFDIILGIARGVLYLHQD 707
            K++ +  ++R++II GI RG+LYLHQD
Sbjct:  419 KKSQLDWKRRYNIIGGITRGLLYLHQD 445          
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 5.178e-39
Identity = 73/109 (66.97%), Postives = 83/109 (76.15%), Query Frame = 1
Query:  322 FELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDW 648
            FE   + AAT NF   NKLG GGFG VYKG    G E+AVKRLS TSGQG EEFKNEV L+AKLQHRNL KLLG  ++ DEK+LVYEF+PNKSLD+F+FD  +K  LDW
Sbjct:  300 FEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDW 408          

HSP 2 Score: 33.113 bits (74), Expect = 5.178e-39
Identity = 13/28 (46.43%), Postives = 21/28 (75.00%), Query Frame = 3
Query:  624 IKEAIVGLEKRFDIILGIARGVLYLHQD 707
            +K+  +   +R++II GI RG++YLHQD
Sbjct:  401 VKKGQLDWTRRYNIINGITRGIVYLHQD 428          
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 6.742e-39
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 1
Query:  322 FELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDW 648
            F+   ++AATD F   NKLGQGGFG VYKG   +G ++AVKRLS  SGQG +EF+NEV+++AKLQHRNL KLLG CLE +EK+LVYEF+PNKSLDYF+FD + +  LDW
Sbjct:  332 FDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDW 440          

HSP 2 Score: 33.4982 bits (75), Expect = 6.742e-39
Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 3
Query:  651 KRFDIILGIARGVLYLHQD 707
            +R+ II GIARG+LYLHQD
Sbjct:  442 RRYKIIGGIARGILYLHQD 460          
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.744e-39
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 1
Query:  322 FELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDWK 651
            F+L  ++ ATD+FS+ N LGQGGFG VYKG    GQE+AVKRL+  SGQG  EFKNEV L+ +LQH+NL KLLG C E DE++LVYEF+PN SLD+FIFDE ++ LL W+
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWE 445          

HSP 2 Score: 35.039 bits (79), Expect = 6.744e-39
Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = 3
Query:  627 KEAIVGLEKRFDIILGIARGVLYLHQD 707
            K +++  E RF II GIARG+LYLH+D
Sbjct:  438 KRSLLTWEVRFRIIEGIARGLLYLHED 464          
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.141e-38
Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 1
Query:  235 LNSSTRLSDREASTSAKRNKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDW 648
            +N     S RE S   K  +    +++   E+ TV+ AT+NFS+ NKLGQGGFG VYKG+L  G+EIAVKRLS TS QG +EF NEV LIA+LQH NL ++LGCC+E DEKML+YE++ N SLD ++F ++R+  L+W
Sbjct:  491 MNEMVLSSKREFSGEYKFEE----LELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNW 624          

HSP 2 Score: 34.2686 bits (77), Expect = 1.141e-38
Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 3
Query:  651 KRFDIILGIARGVLYLHQD 707
            +RFDI  G+ARG+LYLHQD
Sbjct:  626 ERFDITNGVARGLLYLHQD 644          
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.145e-38
Identity = 76/129 (58.91%), Postives = 92/129 (71.32%), Query Frame = 1
Query:  262 REASTSAKRNKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDW 648
            R   T   +N D+       F+L  +L AT+ FS  NKLGQGGFG VYKG L +GQEIAVKRL+  SGQG  EFKNEVLL+ +LQHRNL KLLG C E +E++LVYE +PN SLD+FIFDE ++ LL W
Sbjct:  308 RRIYTEINKNSDSDGQATLRFDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTW 436          

HSP 2 Score: 30.8018 bits (68), Expect = 1.145e-38
Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 3
Query:  627 KEAIVGLEKRFDIILGIARGVLYLHQD 707
            K  ++  + R+ II G+ARG+LYLH+D
Sbjct:  430 KRWLLTWDVRYRIIEGVARGLLYLHED 456          
BLAST of FC930411 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.490e-38
Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 1
Query:  310 DVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLATGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLAKLLGCCLEKDEKMLVYEFMPNKSLDYFIFDESRKQLLDW 648
            D    +  T+ AATDNFS  N+LG+GGFG VYKG  + GQEIAVKRLS TSGQG  EFKNE+LL+AKLQHRNL +LLG C+E  E++LVYEF+ N SLD FIFD  ++QLLDW
Sbjct:  345 DSLVVDFETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQLLDW 457          

HSP 2 Score: 29.261 bits (64), Expect = 1.490e-38
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  654 RFDIILGIARGVLYLHQD 707
            R+ +I G+ARG+LYLH+D
Sbjct:  460 RYKMIGGVARGLLYLHED 477          
The following BLAST results are available for this feature:
BLAST of FC930411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
CRK16_ARATH1.379e-3964.86Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH1.797e-3954.11Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK23_ARATH3.042e-3964.22Putative cysteine-rich receptor-like protein kinas... [more]
CRK32_ARATH3.050e-3964.81Putative cysteine-rich receptor-like protein kinas... [more]
CRK24_ARATH5.178e-3966.97Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK20_ARATH6.742e-3964.22Putative cysteine-rich receptor-like protein kinas... [more]
CRK40_ARATH6.744e-3962.73Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
SRK6_BRAOE1.141e-3853.62Putative serine/threonine-protein kinase receptor ... [more]
CRK36_ARATH1.145e-3858.91Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK28_ARATH1.490e-3865.49Cysteine-rich receptor-like protein kinase 28 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34007C07EF PostHarvC1 Citrus clementina cDNA clone C34007C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930411 ID=FC930411; Name=FC930411; organism=Citrus clementina; type=EST; length=707bp
GACATCACAAATGCTGGTCAAGACTTATTTGTACGTGCTGACGCGGCTGA
ATTAGCTGCAGAGGCACAGAAAAACTCAAAAAGCAATCGAGCAAGAAAGA
GGAGGCTTGCTCTTATTATCGTCGCTATTGTTCTCGGAGTGCTTCTGCTG
GGCTTATGCTACTTTTTCCTGTGGAGAAGGCTTGATACAAGGATAGGTGA
GAGGAAAAGACAAAGGCGACGTGAATTGTTATTTTTGAATTCAAGCACAA
GATTGTCTGATCGTGAGGCCTCCACTAGTGCTAAACGCAACAAAGACACT
GGGAATGTAGATGTGACATTCTTTGAACTAAGCACTGTGCTAGCAGCGAC
AGATAATTTTTCCACTTCTAATAAGCTTGGACAAGGGGGATTTGGTCCAG
TTTACAAGGGTAAGCTAGCGACTGGACAGGAGATAGCTGTCAAAAGGTTA
TCAACAACATCAGGACAAGGAATTGAGGAATTCAAAAATGAGGTCTTATT
GATAGCAAAACTTCAACACAGAAATCTTGCAAAGCTCTTGGGTTGTTGTT
TGGAAAAAGATGAAAAGATGTTAGTCTATGAGTTCATGCCTAACAAAAGC
TTGGACTACTTTATTTTTGATGAATCAAGGAAGCAATTGTTGGATTGGAA
AAGCGCTTCGATATAATTTTAGGGATAGCTCGAGGGGTCCTATATCTACA
TCAAGAT
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