FC930417

Overview
NameFC930417
Unique NameFC930417
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: LGMN_RAT (Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.018e-50
Identity = 93/167 (55.69%), Postives = 119/167 (71.26%), Query Frame = 3
Query:  180 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP-----------TSRYIYADEL 641
            G G   +  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA NEENP PGV+IN P+G DVYKGVPKDYTGEDVT ENF AV+ G++ A+ G GSGKV+ SGP DH+F++++DHG  G+L  P           T RY+Y  ++
Sbjct:   14 GAGAVHIGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANNEENPTPGVVINRPNGTDVYKGVPKDYTGEDVTPENFLAVLRGDEEAVKGKGSGKVLKSGPRDHVFVYFTDHGATGILVFPNEDLHVKDLNKTIRYMYEHKM 180          

HSP 2 Score: 22.7126 bits (47), Expect = 2.018e-50
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  677 YXSLVFYLESCE 712
            Y  +VFY+E+CE
Sbjct:  181 YQKMVFYIEACE 192          
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: LGMN_HUMAN (Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.723e-49
Identity = 85/144 (59.03%), Postives = 112/144 (77.78%), Query Frame = 3
Query:  183 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP 611
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+FI+++DHG  G+L  P
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFTDHGSTGILVFP 157          

HSP 2 Score: 22.7126 bits (47), Expect = 3.723e-49
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  677 YXSLVFYLESCE 712
            Y  +VFY+E+CE
Sbjct:  179 YRKMVFYIEACE 190          
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: LGMN_MACFA (Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 4.852e-49
Identity = 84/144 (58.33%), Postives = 112/144 (77.78%), Query Frame = 3
Query:  183 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP 611
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++++DHG  G+L  P
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYFTDHGSTGILVFP 157          

HSP 2 Score: 22.7126 bits (47), Expect = 4.852e-49
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  677 YXSLVFYLESCE 712
            Y  +VFY+E+CE
Sbjct:  179 YRKMVFYIEACE 190          
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: LGMN_MOUSE (Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.074e-48
Identity = 93/167 (55.69%), Postives = 117/167 (70.06%), Query Frame = 3
Query:  180 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP-----------TSRYIYADEL 641
            G G   V  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +EENP PGV+IN P+G DVYKGV KDYTGEDVT ENF AV+ G+  A+ G GSGKV+ SGP DH+FI+++DHG  G+L  P           T RY+Y  ++
Sbjct:   14 GAGAVPVGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFIYFTDHGATGILVFPNDDLHVKDLNKTIRYMYEHKM 180          

HSP 2 Score: 22.7126 bits (47), Expect = 1.074e-48
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  677 YXSLVFYLESCE 712
            Y  +VFY+E+CE
Sbjct:  181 YQKMVFYIEACE 192          
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: LGMN_PONAB (Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.100e-48
Identity = 83/142 (58.45%), Postives = 110/142 (77.46%), Query Frame = 3
Query:  189 GAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP 611
            GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++ +DHG  G+L  P
Sbjct:   16 GAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYSTDHGSTGILVFP 157          

HSP 2 Score: 22.7126 bits (47), Expect = 3.100e-48
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  677 YXSLVFYLESCE 712
            Y  +VFY+E+CE
Sbjct:  179 YRKMVFYIEACE 190          
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: LGMN_BOVIN (Legumain OS=Bos taurus GN=LGMN PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.364e-47
Identity = 87/165 (52.73%), Postives = 117/165 (70.91%), Query Frame = 3
Query:  183 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP-----------TSRYIYADEL 641
            G GA   +D +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +E+NP PG++IN P+G DVY+GV KDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++++DHG  G+L  P           T RY+Y  ++
Sbjct:   14 GTGAVPLEDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIVHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGSDVYQGVLKDYTGEDVTPKNFLAVLRGDAEAVKGVGSGKVLKSGPRDHVFVYFTDHGATGILVFPNEDLHVKDLNETIRYMYEHKM 178          

HSP 2 Score: 22.7126 bits (47), Expect = 3.364e-47
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  677 YXSLVFYLESCE 712
            Y  +VFY+E+CE
Sbjct:  179 YQKMVFYIEACE 190          
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: HGLB_SCHMA (Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 75/154 (48.70%), Postives = 104/154 (67.53%), Query Frame = 3
Query:  195 KVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLK 656
            +V+D+  S   +WAVL+AGSNG+ NYRHQAD+CHAY +LR  G+K E+II  MYDDIA+N  NP PG + N  +  D Y+GV  DY G++V  + F  V+ G+K+A     GKV+ SG ND +FI+++DHG PG++  P    +YA E +  LK
Sbjct:   26 EVSDETVSDNNKWAVLVAGSNGYPNYRHQADVCHAYHVLRSKGIKPEHIITMMYDDIAYNLMNPFPGKLFNDYNHKDWYEGVVIDYRGKNVNSKTFLKVLKGDKSA----GGKVLKSGKNDDVFIYFTDHGAPGLIAFPDDE-LYAKEFMSTLK 174          
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: HGLB_SCHJA (Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.560e-36
Identity = 76/143 (53.15%), Postives = 96/143 (67.13%), Query Frame = 3
Query:  228 RWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLK 656
            +WAVL+AGSNGF NYRHQAD+CHAY +L   G+K E+II FMYDDIA N+ENP PG I N     D YKGV  DY G+ V  + F  V+ G+K A     GKV+ SG ND +FI+++DHG PG+L  P    ++A   I+ LK
Sbjct:   31 KWAVLVAGSNGFENYRHQADVCHAYHVLLSKGVKPEHIITFMYDDIAHNKENPFPGKIFNDYRHKDYYKGVVIDYKGKKVNPKTFLQVLKGDKRA----GGKVLKSGKNDDVFIYFTDHGAPGILAFPDDD-LHAKPFINTLK 168          
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: GPI8_DROME (Putative GPI-anchor transamidase OS=Drosophila melanogaster GN=CG4406 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.601e-19
Identity = 56/150 (37.33%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  231 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVV-DSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKR 659
            WAVL+  S  ++NYRH A++   Y+ +++ G+ D  II+ + DD+A N  NPRPG + N+       +GDD    V  DY G +VTVENF  ++ G     T  S K++ D+G N  + I+ + HGG G L    S  I + EL D +++
Sbjct:   47 WAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNARNPRPGQVYNNANQHINVYGDD----VEVDYRGYEVTVENFVRLLTGRTQNGTARSKKLLSDAGSN--VLIYLTGHGGDGFLKFQDSEEITSQELADGIQQ 190          
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: GPI8_MOUSE (GPI-anchor transamidase OS=Mus musculus GN=Pigk PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.767e-17
Identity = 64/200 (32.00%), Postives = 98/200 (49.00%), Query Frame = 3
Query:   78 ITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKR 659
            +  L ALA ++ GS   AG I     +A +FF +G                WAVL+  S  ++NYRH A+    Y+ +++ G+ D +I++ + DD+A N  NP+P  + +H       +GDD    V  DY   +VTVENF  V+ G     T  S +++ S    +I I+ + HGG G L    S  I   EL D  ++
Sbjct:   11 VATLAALALLSLGS-SAAGHI---EDQAEQFFRSGHTN------------NWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKPATVFSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQ 189          
The following BLAST results are available for this feature:
BLAST of FC930417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LGMN_RAT2.018e-5055.69Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1[more]
LGMN_HUMAN3.723e-4959.03Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1[more]
LGMN_MACFA4.852e-4958.33Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1[more]
LGMN_MOUSE1.074e-4855.69Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1[more]
LGMN_PONAB3.100e-4858.45Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1[more]
LGMN_BOVIN3.364e-4752.73Legumain OS=Bos taurus GN=LGMN PE=1 SV=1[more]
HGLB_SCHMA5.363e-3748.70Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3[more]
HGLB_SCHJA1.560e-3653.15Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=... [more]
GPI8_DROME8.601e-1937.33Putative GPI-anchor transamidase OS=Drosophila mel... [more]
GPI8_MOUSE2.767e-1732.00GPI-anchor transamidase OS=Mus musculus GN=Pigk PE... [more]

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Properties
Property NameValue
Genbank descriptionC34007D01EF PostHarvC1 Citrus clementina cDNA clone C34007D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930417 ID=FC930417; Name=FC930417; organism=Citrus clementina; type=EST; length=713bp
GACATTTCCATAACTAGCTCCAGCAACCAATCAACCCCCTTCAAAAAACC
ATGACGCGCCTTGCCTCCGGCGTGCTAATCACGCTCCTAGTCGCTCTTGC
AGGAATCGCCGATGGAAGCAGAGACATAGCAGGTGACATTCTGAAGCTAC
CATCGGAAGCCTATAGGTTCTTCCATAATGGTGGGGGAGGGGCAAAGGTC
AACGATGATGATGATTCTGTCGGCACGAGATGGGCCGTCCTGCTTGCCGG
ATCTAATGGCTTCTGGAATTACAGGCATCAGGCTGATATTTGTCATGCTT
ATCAACTCTTGAGGAAAGGTGGGCTGAAGGATGAAAATATTATTGTTTTC
ATGTATGATGACATCGCTTTCAATGAAGAGAACCCAAGGCCTGGAGTCAT
CATTAACCACCCCCATGGCGATGATGTTTACAAAGGAGTTCCAAAGGATT
ACACGGGGGAAGATGTTACTGTTGAAAACTTTTTTGCTGTTATCCTGGGA
AATAAAACAGCTCTTACAGGGGGCAGTGGGAAGGTTGTGGATAGCGGCCC
CAATGATCATATTTTCATATTCTACTCAGATCATGGTGGCCCTGGGGTGC
TAGGGATGCCCACCAGTCGATACATATATGCTGATGAACTGATCGATGTC
TTAAAAAGAAGCATGCTTCTGGGAACTACNAAAGCTTGGTATTTTATCTC
GAAAGCTGTGAAT
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