FC930417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: GPI8_PONAB (GPI-anchor transamidase OS=Pongo abelii GN=PIGK PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.614e-17 Identity = 61/210 (29.05%), Postives = 100/210 (47.62%), Query Frame = 3 Query: 48 TMTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKR 659 +++R AS + LL++ +A + +A +FF +G WAVL+ S ++NYRH A+ Y+ +++ G+ D +I++ + DD+A N NP+P + +H +GDD V DY +VTVENF V+ G T S +++ S +I I+ + HGG G L S I EL D ++ Sbjct: 6 SLSRAASTLAAVLLLSFGSVAASH---------IEDQAEQFFRSGHTN------------NWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQ 189
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: GPI8_HUMAN (GPI-anchor transamidase OS=Homo sapiens GN=PIGK PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 62/205 (30.24%), Postives = 97/205 (47.32%), Query Frame = 3 Query: 63 ASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKR 659 A+ VL T+L+ G S + +A +FF +G WAVL+ S ++NYRH A+ Y+ +++ G+ D +I++ + DD+A N NP+P + +H +GDD V DY +VTVENF V+ G T S +++ S +I I+ + HGG G L S I EL D ++ Sbjct: 10 AATVLATVLLLSFGSVAASH--------IEDQAEQFFRSGHTN------------NWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQ 189
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: GPI8_BOVIN (GPI-anchor transamidase OS=Bos taurus GN=PIGK PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 51/149 (34.23%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 231 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKR 659 WAVL+ S ++NYRH A+ Y+ +++ G+ D +I++ + DD+A N NP+P + +H +GDD V DY +VTVENF V+ G + T S +++ S +I I+ + HGG G L S I EL D ++ Sbjct: 46 WAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRIPSSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQ 189
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: GPI8_YEAST (GPI-anchor transamidase OS=Saccharomyces cerevisiae GN=GPI8 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.793e-16 Identity = 48/145 (33.10%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 231 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINH-PHGDDVY-KGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKR 659 WAVL++ S ++NYRH A++ Y+ +++ G+ D II+ + DD+A N N PG + N+ H D+Y V DY G +VTVENF ++ T S +++ + N +IFI+ + HGG L + I ++++ D ++ Sbjct: 39 WAVLVSTSRFWFNYRHMANVLSMYRTVKRLGIPDSQIILMLSDDVACNSRNLFPGSVFNNKDHAIDLYGDSVEVDYRGYEVTVENFIRLLTDRWTEDHPKSKRLL-TDENSNIFIYMTGHGGDDFLKFQDAEEIASEDIADAFQQ 182
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: GPI8_CAEEL (Putative GPI-anchor transamidase OS=Caenorhabditis elegans GN=T05E11.6 PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16 Identity = 47/141 (33.33%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 177 NGGGGAKVNDDDDSVG--TRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVY-KGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGG 590 N G K+++ D+ G WAVL+ S ++NYRH +++ Y +++ G+ D NII+ + +D+ N NPRPG + G ++Y V DY GE+VTVE+F V+ G T S +++ + ++ I+ + HGG Sbjct: 19 NTGLQLKIDELFDTPGHTNNWAVLVCTSKFWFNYRHVSNVLALYHSIKRLGIPDSNIIMMLAEDVPCNSRNPRPGTVYAARAGTNLYGSDVEVDYRGEEVTVESFIRVLTGRHHPATPRSKRLL-TDHQSNVLIYLTGHGG 158
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: GPI8_PIG (GPI-anchor transamidase OS=Sus scrofa GN=PIGK PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16 Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 3 Query: 231 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKR 659 WAVL+ S ++NYRH A+ Y+ +++ G+ D +I++ + DD+A N NP+P + +H +GDD V DY VTVENF V+ G T S +++ S +I I+ + HGG G L S I EL D ++ Sbjct: 46 WAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDD----VEVDYRSYVVTVENFLRVLTGRIPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQ 189
BLAST of FC930417 vs. ExPASy Swiss-Prot
Match: GPI8_SCHPO (GPI-anchor transamidase OS=Schizosaccharomyces pombe GN=gpi8 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13 Identity = 44/152 (28.95%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 210 DDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVII-NHPHGDDVY-KGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKR 659 + S WAVL++ S ++NYRH A++ Y+ +++ G+ D II+ + DD A N N PG + N D+Y + + DY G +VTVE F ++ T S +++ + +I I+ + HGG G + + + +++L D +++ Sbjct: 20 ESSHTNNWAVLISTSRFWFNYRHTANVLGIYRSVKRLGIPDSQIILMIADDYACNSRNLFPGTVFDNADRALDLYGEEIEIDYKGYEVTVEAFIRLLTERVPENTPASKRLL-TNERSNILIYMTGHGGDGFIKFQDAEELSSEDLADAIEQ 170 The following BLAST results are available for this feature:
BLAST of FC930417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930417 ID=FC930417; Name=FC930417; organism=Citrus clementina; type=EST; length=713bpback to top |