FC930429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.556e-74 Identity = 145/187 (77.54%), Postives = 158/187 (84.49%), Query Frame = 2 Query: 53 MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTEPKE 613 M Q+WETLKE ITAYTGLSPAAFFTV+AL +A+Y V+SG F S + H + RS E + Q EPLPPPVQLGEITEEELK YDGSDSKKPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE++DLTGDISGLG FELEALQDWEYKFMSKYVKVG+I+ DG ES+EP E Sbjct: 1 MVQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVH-RPRSLEVQPQSEPLPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTIQK----KDGEGK-ESSEPSE 181
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2) HSP 1 Score: 268.47 bits (685), Expect = 2.817e-71 Identity = 146/216 (67.59%), Postives = 163/216 (75.46%), Query Frame = 2 Query: 53 MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGS---SDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTEPKE---GVVDTPAESKGVV----DTPAET 670 MAL+LW+TLKEAI AYTGLSP FFT +AL +AIY V+SG F S N HQ+ +E+ P+P PVQ+GEITEEELKQYDGSD +KPLLMAIK QIYDV+QSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLT D+SGLGPFEL+ALQDWEYKFMSKY KVG++K + AS E TE E V TP K VV D PAET Sbjct: 1 MALELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTVKVAGSEPETASVSEPTENVEQDAHVTTTP--GKTVVDKSDDAPAET 214
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23 Identity = 50/99 (50.51%), Postives = 69/99 (69.70%), Query Frame = 2 Query: 263 EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKS 559 E T E+L QY+G+D KP+ +AIK +++DV+ + FYG GG Y++FAGKDASRAL KMS E+D++ + GL E+ L DWE KF +KY VG + S Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: NENF_RAT (Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.503e-19 Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 245 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVGSIKSTVPVTDGA 583 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS + DLT DISGL ELEAL D + + +KY VG + DG+ Sbjct: 41 PPVRL--FTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVGYTARRILNEDGS 152
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: NENF_MOUSE (Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.767e-18 Identity = 50/114 (43.86%), Postives = 70/114 (61.40%), Query Frame = 2 Query: 245 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVGSIKSTVPVTDGA 583 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS + DLT D +GL ELEAL D + + +KY VG + DG+ Sbjct: 41 PPVRL--FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVGYTARRILNEDGS 152
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: PGRC1_RAT (Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.794e-17 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 2 Query: 233 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 553 EP P P ++ + T EL++YDG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG + Sbjct: 61 EPPPLPRLKPRDFTPAELRRYDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 170
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: PGRC1_PIG (Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17 Identity = 50/151 (33.11%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 110 SPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 553 SP + ++ +Y ++ G Q + + ++ P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG + Sbjct: 28 SPLNLLLLGLCIFLLYKIVRG--------DQPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 169
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: PGRC1_BOVIN (Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17 Identity = 50/151 (33.11%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 110 SPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 553 SP + ++ +Y ++ G Q + + ++ P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG + Sbjct: 28 SPLNLLLLGLCIFLLYKIVRG--------DQPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 169
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: NENF_BOVIN (Neudesin OS=Bos taurus GN=NENF PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17 Identity = 48/114 (42.11%), Postives = 69/114 (60.53%), Query Frame = 2 Query: 245 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVGSIKSTVPVTDGA 583 PPV+L TEEEL +Y G + +P+ MA+K ++DV+ + FYG G PY GKD++R +AKMS + DLT D +GL ELE+L D + + +KY VG + DG+ Sbjct: 39 PPVRL--FTEEELARYGGEEEDQPIYMAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAEELESLDDVFTRVYKAKYPIVGYTARRILNEDGS 150
BLAST of FC930429 vs. ExPASy Swiss-Prot
Match: PGRC1_MOUSE (Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4) HSP 1 Score: 88.5817 bits (218), Expect = 3.996e-17 Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 2 Query: 233 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 553 EP P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG + Sbjct: 61 EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 170 The following BLAST results are available for this feature:
BLAST of FC930429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930429 ID=FC930429; Name=FC930429; organism=Citrus clementina; type=EST; length=753bpback to top |