FC930440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18 Identity = 45/145 (31.03%), Postives = 86/145 (59.31%), Query Frame = 2 Query: 92 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 526 G S F L+ KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG + R +W++Y G++F+VD D +R++E+++EL ++ ++ + + +L+ NK D P A++ + + GL+ Sbjct: 11 GFSSVLQFLGLY-KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLY 154
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18 Identity = 45/145 (31.03%), Postives = 86/145 (59.31%), Query Frame = 2 Query: 92 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 526 G S F L+ KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG + R +W++Y G++F+VD D +R++E+++EL ++ ++ + + +L+ NK D P A++ + + GL+ Sbjct: 11 GFSSVLQFLGLY-KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLY 154
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18 Identity = 52/185 (28.11%), Postives = 97/185 (52.43%), Query Frame = 2 Query: 92 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLS 610 G S F L+ KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R++E++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ L R + +G EG WLS Sbjct: 11 GFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 194
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18 Identity = 52/185 (28.11%), Postives = 97/185 (52.43%), Query Frame = 2 Query: 92 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLS 610 G S F L+ KK +++ +GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R++E++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ L R + +G EG WLS Sbjct: 11 GFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 194
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18 Identity = 59/189 (31.22%), Postives = 89/189 (47.09%), Query Frame = 2 Query: 86 KMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-----------RQRHWYIQSTCATSGEGLYEGLDWLSTTL 619 K LSF L+ KK+ I+ VGLD AGK+T+L LK T PT + + +I F +D+GG + R LW Y N+ G++F+VDS D R E+R L +L+ +L +L+ +NK D+ A++ + G+ L QR + + G +G WLS L Sbjct: 8 KSALSFLGLY-----KKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLRSDQRPLEVFPCSVINRFGYTDGFKWLSKYL 191
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18 Identity = 52/185 (28.11%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 92 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLS 610 G S F L+ KK +++ +GLD AGKTT+L LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R++E++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ L R + +G EG WLS Sbjct: 11 GFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 194
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18 Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 131 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL--------------HSLRQRHWYIQSTCATSGEGLYEGLDWLS 610 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L+++ L L+ NK D+P A + E+ LGL ++R ++ S G G EG WLS Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMGYG--EGFKWLS 189
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18 Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 131 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 523 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L+++ L L+ NK D+P A + E+ LGL Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGL 148
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18 Identity = 55/174 (31.61%), Postives = 85/174 (48.85%), Query Frame = 2 Query: 131 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSG--------------EGLYEGLDWLS 610 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L++D L L+ NK D P A + E+ LGL + + + SG G EG WLS Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLS 191
BLAST of FC930440 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17 Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 131 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 523 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L+++ L L+ NK D+P A + E+ LGL Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGL 148 The following BLAST results are available for this feature:
BLAST of FC930440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930440 ID=FC930440; Name=FC930440; organism=Citrus clementina; type=EST; length=702bpback to top |