FC930444

Overview
NameFC930444
Unique NameFC930444
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_YERPP (Phosphoenolpyruvate carboxylase OS=Yersinia pestis (strain Pestoides F) GN=ppc PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 117/241 (48.55%), Postives = 147/241 (61.00%), Query Frame = 2
Query:   14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736
            S+  YVISMA   SDVLAV LL K+A           CP  TL V PLFET+ DL  A  V+ +LL IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI +TLFH           P + A+ SQPPGS+ G LR TEQGEM++ KFGLP+  +  L +Y  A+L A + PP  P++E W  +M+ +S  SC  YRS V ENPEF+ YF  ATP+ ELG
Sbjct:  467 SIAAYVISMAKVPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKE-WIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELG 691          
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_YERPN (Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ppc PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 117/241 (48.55%), Postives = 147/241 (61.00%), Query Frame = 2
Query:   14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736
            S+  YVISMA   SDVLAV LL K+A           CP  TL V PLFET+ DL  A  V+ +LL IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI +TLFH           P + A+ SQPPGS+ G LR TEQGEM++ KFGLP+  +  L +Y  A+L A + PP  P++E W  +M+ +S  SC  YRS V ENPEF+ YF  ATP+ ELG
Sbjct:  467 SIAAYVISMAKVPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKE-WIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELG 691          
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_YERPE (Phosphoenolpyruvate carboxylase OS=Yersinia pestis GN=ppc PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 117/241 (48.55%), Postives = 147/241 (61.00%), Query Frame = 2
Query:   14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736
            S+  YVISMA   SDVLAV LL K+A           CP  TL V PLFET+ DL  A  V+ +LL IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI +TLFH           P + A+ SQPPGS+ G LR TEQGEM++ KFGLP+  +  L +Y  A+L A + PP  P++E W  +M+ +S  SC  YRS V ENPEF+ YF  ATP+ ELG
Sbjct:  467 SIAAYVISMAKVPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKE-WIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELG 691          
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_YERPB (Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ppc PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 117/241 (48.55%), Postives = 147/241 (61.00%), Query Frame = 2
Query:   14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736
            S+  YVISMA   SDVLAV LL K+A           CP  TL V PLFET+ DL  A  V+ +LL IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI +TLFH           P + A+ SQPPGS+ G LR TEQGEM++ KFGLP+  +  L +Y  A+L A + PP  P++E W  +M+ +S  SC  YRS V ENPEF+ YF  ATP+ ELG
Sbjct:  467 SIAAYVISMAKVPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKE-WIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELG 691          
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_YERPA (Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ppc PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 117/241 (48.55%), Postives = 147/241 (61.00%), Query Frame = 2
Query:   14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736
            S+  YVISMA   SDVLAV LL K+A           CP  TL V PLFET+ DL  A  V+ +LL IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI +TLFH           P + A+ SQPPGS+ G LR TEQGEM++ KFGLP+  +  L +Y  A+L A + PP  P++E W  +M+ +S  SC  YRS V ENPEF+ YF  ATP+ ELG
Sbjct:  467 SIAAYVISMAKVPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKE-WIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELG 691          
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_YERP3 (Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ppc PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 117/241 (48.55%), Postives = 147/241 (61.00%), Query Frame = 2
Query:   14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736
            S+  YVISMA   SDVLAV LL K+A           CP  TL V PLFET+ DL  A  V+ +LL IDWYR  I     G Q VM+GYSDS KDAG   A+W  Y+AQ+ ++  C + GI +TLFH           P + A+ SQPPGS+ G LR TEQGEM++ KFGLP+  +  L +Y  A+L A + PP  P++E W  +M+ +S  SC  YRS V ENPEF+ YF  ATP+ ELG
Sbjct:  467 SIAAYVISMAKVPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKE-WIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELG 691          
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_AERS4 (Phosphoenolpyruvate carboxylase OS=Aeromonas salmonicida (strain A449) GN=ppc PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 112/242 (46.28%), Postives = 146/242 (60.33%), Query Frame = 2
Query:   11 DSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736
            D+ G Y+ISMA   SDVLAV+LL K+A                + V PLFET  DL     V+ +LLS+DWYR +I     G Q VM+GYSDS KDAG   A W  Y A E +VA      +++TLFH           P + AI SQPPGS+ G LR TEQGEM++ KFGLP+ A+  L +YT+AVL   + PP  P+ E WR +ME+++ +SC +YRS V  +P+F+ YF  ATP+ ELG
Sbjct:  464 DAFGIYIISMAGAPSDVLAVQLLLKEAGCKFR-----------MPVAPLFETQEDLMAGTAVMERLLSVDWYRGYI----QGRQYVMIGYSDSAKDAGMMAAGWAQYAAMESLVALAEASNLRLTLFHGRGGTVGRGGAPAHQAILSQPPGSLRGGLRVTEQGEMIRFKFGLPKVAIHSLNLYTSAVLEGNLLPPPKPK-ESWRAVMEQLATVSCDHYRSIVRGHPDFVPYFRAATPEMELG 689          
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_AERHH (Phosphoenolpyruvate carboxylase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ppc PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.333e-53
Identity = 112/242 (46.28%), Postives = 147/242 (60.74%), Query Frame = 2
Query:   11 DSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736
            D+ G Y+ISMA   SDVLAV+LL K+A                + V PLFET  DL     V+ +LLS+DWYR +I     G Q VM+GYSDS KDAG   A W  Y A E +VA      +++TLFH           P + AI SQPPGS+ G LR TEQGEM++ KFGLP+ A++ L +YT+AVL   + PP  P+ E WR +ME+++ +SC +YRS V  +P+F+ YF  ATP+ ELG
Sbjct:  464 DAFGIYIISMAGAPSDVLAVQLLLKEAGCKFR-----------MPVAPLFETQEDLMAGTAVMERLLSVDWYRGYI----QGRQYVMIGYSDSAKDAGMMAAGWAQYAAMESLVALAEANNLRLTLFHGRGGTVGRGGAPAHQAILSQPPGSLRGGLRVTEQGEMIRFKFGLPKVAIQSLNLYTSAVLEGNLLPPPKPK-ECWRAVMEQLASVSCDHYRSIVRGHPDFVPYFRAATPEMELG 689          
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_PHOLL (Phosphoenolpyruvate carboxylase OS=Photorhabdus luminescens subsp. laumondii GN=ppc PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.697e-53
Identity = 112/241 (46.47%), Postives = 149/241 (61.83%), Query Frame = 2
Query:   11 DSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733
            D++  YVISMA   SDVLAV LL K+A           CP  TL V PLFET+ DL  A  +I++L++I WYR+ I    +  Q VM+GYSDS KDAG   AAW  Y+AQ+ ++  C + GI +TLFH           P + A+ SQPPGS+ G LR TEQGEM++ KFGLPQ  +  L +Y +A+L A + PP  P+ E W  +M+ +S +SC+ YR  V E P+F+ YF  ATP+ EL
Sbjct:  466 DAIAAYVISMAKAPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNAENIIQQLMNIQWYRELI----HDKQMVMIGYSDSAKDAGVMAAAWAQYRAQDALINVCEKEGITLTLFHGRGGTIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPQVTISSLALYASAILEANLLPPPEPKPE-WHQVMDTLSDVSCKMYRDYVREQPDFVPYFRAATPEQEL 690          
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP1_MAIZE (Phosphoenolpyruvate carboxylase 1 OS=Zea mays GN=PEP1 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 9.697e-53
Identity = 109/242 (45.04%), Postives = 150/242 (61.98%), Query Frame = 2
Query:   11 DSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736
            DS GPY+ISMA+  SDVLAVELLQ++  +       +P P     VVPLFE + DL+ A   + +L S+DWY   I     G Q+VMVGYSDSGKDAGR +AAW+LY+AQE++      +G+K+TLFH           PT+LAI SQPP ++ G++R T QGE+++  FG      + L+ +T A L   M PP  P+ E WR LM+E++ ++ + YRS V +   F+ YF  ATP+ E G
Sbjct:  527 DSFGPYIISMATAPSDVLAVELLQRECGVR------QPLP-----VVPLFERLADLQSAPASVERLFSVDWYMDRI----KGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTINGSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPE-WRKLMDEMAVVATEEYRSVVVKEARFVEYFRSATPETEYG 752          
The following BLAST results are available for this feature:
BLAST of FC930444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP_YERPP1.954e-5348.55Phosphoenolpyruvate carboxylase OS=Yersinia pestis... [more]
CAPP_YERPN1.954e-5348.55Phosphoenolpyruvate carboxylase OS=Yersinia pestis... [more]
CAPP_YERPE1.954e-5348.55Phosphoenolpyruvate carboxylase OS=Yersinia pestis... [more]
CAPP_YERPB1.954e-5348.55Phosphoenolpyruvate carboxylase OS=Yersinia pseudo... [more]
CAPP_YERPA1.954e-5348.55Phosphoenolpyruvate carboxylase OS=Yersinia pestis... [more]
CAPP_YERP31.954e-5348.55Phosphoenolpyruvate carboxylase OS=Yersinia pseudo... [more]
CAPP_AERS41.954e-5346.28Phosphoenolpyruvate carboxylase OS=Aeromonas salmo... [more]
CAPP_AERHH3.333e-5346.28Phosphoenolpyruvate carboxylase OS=Aeromonas hydro... [more]
CAPP_PHOLL9.697e-5346.47Phosphoenolpyruvate carboxylase OS=Photorhabdus lu... [more]
CAPP1_MAIZE9.697e-5345.04Phosphoenolpyruvate carboxylase 1 OS=Zea mays GN=P... [more]

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Properties
Property NameValue
Genbank descriptionC34007F05EF PostHarvC1 Citrus clementina cDNA clone C34007F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930444 ID=FC930444; Name=FC930444; organism=Citrus clementina; type=EST; length=736bp
GGGAGGGAGTGATTCACTTGGGCCATACGTCATTTCTATGGCTTCTAATG
CAAGTGATGTCCTTGCCGTAGAGCTTTTGCAGAAAGACGCCCGACTTGCT
GTTAGTGGTGAGTTAGGGAGACCATGTCCTGGTGGAACGCTACGTGTGGT
TCCTCTGTTTGAGACTGTGACGGACTTGAGAGGAGCTGGTTTGGTGATCA
GGAAATTGTTATCAATTGACTGGTATAGAAAGCACATTATAAAAAACCAT
AACGGGCATCAAGAGGTGATGGTTGGATATTCTGATTCTGGTAAAGATGC
TGGACGCTTCACTGCTGCATGGGAACTATACAAAGCCCAAGAGGATGTTG
TGGCTGCCTGCAATGAGTTTGGTATTAAAGTGACTCTTTTCCATGGGCGA
GGAGGGAGTATTGGCCGTGGTGGTGGCCCTACATATCTTGCCATTCAGTC
TCAACCGCCTGGCTCTGTAATGGGAACACTTCGATCGACTGAGCAAGGGG
AGATGGTGCAGGCCAAGTTTGGGTTGCCACAGACAGCTGTTAGACAGCTA
GAGATATACACAACTGCTGTGCTGCTTGCAACCATGCGACCTCCTCAACC
TCCTCGAGAAGAAAAATGGCGTAATCTCATGGAGGAGATCTCAAAAATTA
GTTGCCAGAATTACCGGAGCACAGTCTATGAAAACCCAGAATTCCTTGCC
TACTTTCACGAGGCTACACCCCAGGCTGAACTAGGG
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