FC930444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_BURPS (Phosphoenolpyruvate carboxylase OS=Burkholderia pseudomallei GN=ppc PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-40 Identity = 101/248 (40.73%), Postives = 139/248 (56.05%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQ--PPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK+ LFH PTY AI SQPPG+V G +R TEQGE++ +KF P+ R LE A L AT+ P P + + M+ +S + +YR+ VYE P F YF +TP E+ Sbjct: 550 GARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEVIASKFANPEIGRRNLETVVAATLEATLAPHSNAPKQLPAFEAAMQTLSDAAMASYRALVYETPGFTDYFFSSTPITEI 794
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_BURP6 (Phosphoenolpyruvate carboxylase OS=Burkholderia pseudomallei (strain 668) GN=ppc PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-40 Identity = 101/248 (40.73%), Postives = 139/248 (56.05%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQ--PPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK+ LFH PTY AI SQPPG+V G +R TEQGE++ +KF P+ R LE A L AT+ P P + + M+ +S + +YR+ VYE P F YF +TP E+ Sbjct: 550 GARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEVIASKFANPEIGRRNLETVVAATLEATLAPHSNAPKQLPAFEAAMQTLSDAAMASYRALVYETPGFTDYFFSSTPITEI 794
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_BURMS (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain SAVP1) GN=ppc PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-40 Identity = 101/248 (40.73%), Postives = 139/248 (56.05%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQ--PPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK+ LFH PTY AI SQPPG+V G +R TEQGE++ +KF P+ R LE A L AT+ P P + + M+ +S + +YR+ VYE P F YF +TP E+ Sbjct: 550 GARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEVIASKFANPEIGRRNLETVVAATLEATLAPHSNAPKQLPAFEAAMQTLSDAAMASYRALVYETPGFTDYFFSSTPITEI 794
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_BURMA (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei GN=ppc PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-40 Identity = 101/248 (40.73%), Postives = 139/248 (56.05%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQ--PPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK+ LFH PTY AI SQPPG+V G +R TEQGE++ +KF P+ R LE A L AT+ P P + + M+ +S + +YR+ VYE P F YF +TP E+ Sbjct: 550 GARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEVIASKFANPEIGRRNLETVVAATLEATLAPHSNAPKQLPAFEAAMQTLSDAAMASYRALVYETPGFTDYFFSSTPITEI 794
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_BURM9 (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain NCTC 10229) GN=ppc PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-40 Identity = 101/248 (40.73%), Postives = 139/248 (56.05%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQ--PPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK+ LFH PTY AI SQPPG+V G +R TEQGE++ +KF P+ R LE A L AT+ P P + + M+ +S + +YR+ VYE P F YF +TP E+ Sbjct: 550 GARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEVIASKFANPEIGRRNLETVVAATLEATLAPHSNAPKQLPAFEAAMQTLSDAAMASYRALVYETPGFTDYFFSSTPITEI 794
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_BURM7 (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain NCTC 10247) GN=ppc PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.112e-40 Identity = 101/248 (40.73%), Postives = 139/248 (56.05%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGT--LRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGH-QEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQ--PPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G+ ++ Y+IS SD++ V LLQK+ L G LG P L V+PLFET+ DLR A ++R ++ + + H GH QEVM+GYSDS KD G T+ WELY+A+ +V +E GIK+ LFH PTY AI SQPPG+V G +R TEQGE++ +KF P+ R LE A L AT+ P P + + M+ +S + +YR+ VYE P F YF +TP E+ Sbjct: 550 GARAVRNYIISHTETVSDLVEVLLLQKETGL-FEGTLGTPHANARNGLMVIPLFETIADLRNASDIMRAFFALPGVGELLA--HQGHEQEVMLGYSDSNKDGGFLTSNWELYRAELALVDLFDERGIKLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEVIASKFANPEIGRRNLETVVAATLEATLAPHSNAPKQLPAFEAAMQTLSDAAMASYRALVYETPGFTDYFFSSTPITEI 794
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_NITEC (Phosphoenolpyruvate carboxylase OS=Nitrosomonas eutropha (strain C91) GN=ppc PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.226e-40 Identity = 93/245 (37.96%), Postives = 139/245 (56.73%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATM--RPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G +L Y+ISMA+ +L LL K+A L GE R T+ ++PLFET+ DLRG V+ +L S+ YRK ++++ + QEVM+GYSDS KD G T+ WE++KA+ ++ N G+++ LFH P+Y I +QPPGSV G +R TEQGE++ +K+ P+ R LE A + +T+ R + +MEE+S + YR VY+ P F +F E+TP E+ Sbjct: 501 GHVALPNYIISMATGVIHILEAALLLKEAGLLQFGEAAR----STVNIIPLFETIDDLRGCANVMEELFSLPEYRK-MLRSRSNLQEVMLGYSDSNKDGGFVTSNWEIHKAEIELTKVFNRHGVRLRLFHGRGGTVGRGGGPSYQGILAQPPGSVNGQIRLTEQGEVIASKYTDPEIGRRNLETLVAATIESTLLDRDAIHCHTPQCYQIMEELSASAYAAYRDLVYKTPNFTQFFQESTPIREI 740
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_RALSO (Phosphoenolpyruvate carboxylase OS=Ralstonia solanacearum GN=ppc PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.519e-40 Identity = 97/245 (39.59%), Postives = 134/245 (54.69%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPP--QPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 GS + Y+IS SD+L V LLQK+A + G G G + V+PLFET+ DLR A ++ +LL++ + ++ QEVM+GYSDS KD G T+ WELYK + +V G+++ LFH PTY AI SQPPG+V G +R TEQGE++ +KF P+ R LE A L AT+ P +P E++ M+ +S + YR VYE P F YF TP E+ Sbjct: 539 GSRIVRNYIISHTETLSDLLEVMLLQKEAGMFRHGTNGSGGAGLDVMVIPLFETIEDLRNAPQIMGELLALPGFDA-VLAAQGNEQEVMLGYSDSNKDGGFLTSNWELYKTELALVELFERKGVRLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEIISSKFANPEIGRRNLETIVAATLEATLLPTRNRPKGLEEFEAAMQALSDHAFSAYRHLVYETPGFKDYFFATTPITEI 782
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_MYCS2 (Phosphoenolpyruvate carboxylase OS=Mycobacterium smegmatis GN=ppc PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.606e-39 Identity = 92/246 (37.40%), Postives = 142/246 (57.72%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPRE--EKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 G ++ Y+ISM + SD+L +L K+A L ++ P + VVPLFET+ DL+ ++ L + YR ++ +GHQEVM+GYSDS KD G A W LY+A+ D+V + + GI++ LFH P+Y AI +QPPG+V G+LR TEQGE++ AK+ P+ A R LE A L A++ + E E +++E++ ++ + Y V+E P F+ YF +TP +E+G Sbjct: 501 GPQAVPNYIISMCQSVSDMLEAAVLLKEAGLL---DISGSTPYAPVGVVPLFETIDDLQRGSSILEAALDLPEYRT-MVDARDGHQEVMLGYSDSNKDGGYLAANWALYRAELDLVESARKTGIRLRLFHGRGGTVGRGGGPSYDAILAQPPGAVKGSLRITEQGEVIAAKYAEPRIAHRNLETLLAATLEASLLDVEGLGEEAEPAYQVLDELAALAQRAYSELVHETPGFVEYFKTSTPVSEIG 742
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_SYNY3 (Phosphoenolpyruvate carboxylase OS=Synechocystis sp. (strain PCC 6803) GN=ppc PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.097e-39 Identity = 99/268 (36.94%), Postives = 143/268 (53.36%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRK------HIIK-------------------NHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G D Y+ISM ++ASDVL V LL K+A G +LR+VPLFETV DL+ A ++ L S+ +YR H +K N QE+MVGYSDS KD+G ++ WE++KAQ+ + A + + LFH P Y AI +QP G+V G ++ TEQGE++ +K+ LP+ A+ LE TTAV+ A++ E W +MEE++ + + YRS +YE P+FL +F TP E+ Sbjct: 564 GVDICQTYIISMTNDASDVLEVLLLAKEA-----GLYDPATASNSLRIVPLFETVEDLKNAPGIMDSLFSLPFYRATLAGSYHSLKELQNQPPDYYQIPTTTALLNPGNLQEIMVGYSDSNKDSGFLSSNWEIHKAQKSLQAVAQSHRVILRLFHGRGGSVGRGGGPAYKAILAQPAGTVDGRIKITEQGEVLASKYSLPELALYNLETLTTAVIQASLLKSSFDFIEPWNRIMEELACTARRAYRSLIYEEPDFLDFFLTVTPIPEI 826 The following BLAST results are available for this feature:
BLAST of FC930444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 229
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930444 ID=FC930444; Name=FC930444; organism=Citrus clementina; type=EST; length=736bpback to top |