FC930444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_MARMS (Phosphoenolpyruvate carboxylase OS=Marinomonas sp. (strain MWYL1) GN=ppc PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.466e-56 Identity = 114/244 (46.72%), Postives = 156/244 (63.93%), Query Frame = 2 Query: 2 GGSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G +S G YVISMAS SDVLAV L+ K++ + G +R+VPLFET+ DL A +I +L SI WY+ +I NG QEVM+GYSDS KDAG+ A W Y+AQE + C + GI +TLFH P ++AI SQPPGSV G +R TEQGEM++ KFG+P AVR LE+Y +AV+ A++ P +PP+EE WR +M+E++++ YRS + + +F+ YF TP+ EL Sbjct: 462 GQQNSFGSYVISMASAPSDVLAVALMLKESGV-----------GFPMRIVPLFETLADLDNAEPIIEQLFSIPWYKSYI----NGRQEVMIGYSDSAKDAGQIAATWGQYRAQEALTRLCKKHGIHLTLFHGRGGTVGRGGGPAHVAILSQPPGSVNGAIRVTEQGEMIRFKFGIPDIAVRSLELYCSAVMEASLIPAEPPKEE-WRAIMDEMAEVGMNQYRSIIRGHEDFVPYFRATTPEQEL 689
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_PSESM (Phosphoenolpyruvate carboxylase OS=Pseudomonas syringae pv. tomato GN=ppc PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.206e-56 Identity = 121/241 (50.21%), Postives = 152/241 (63.07%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 SLG YVISMA +ASDVLAV+LL K++ L RP +RVVPLFET+ DL AG VI LL + YR + G QEVM+GYSDS KDAG AAW Y+AQE +V C E +++ LFH P + AI SQPPGSV G R+TEQGEM++ KFGLP A + L +Y AVL AT+ PP PP + WR +M++++ YR+ V ENPEF+ YF +ATP+ ELG Sbjct: 467 SLGSYVISMAGSASDVLAVQLLLKESGLQ------RP-----MRVVPLFETLADLDNAGPVIETLLGLPGYRSRL----QGPQEVMIGYSDSAKDAGTTAAAWAQYRAQEKLVEICREQQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPDIAEQNLNLYLAAVLEATLLPPPPP-QPAWRTMMDQMASDGVSAYRAVVRENPEFVEYFRQATPEQELG 691
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_PSEPK (Phosphoenolpyruvate carboxylase OS=Pseudomonas putida (strain KT2440) GN=ppc PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.206e-56 Identity = 121/241 (50.21%), Postives = 155/241 (64.32%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 SLG YVISMA ASDVLAV+LL K+A L RP +RVVPLFET+ DL AG V+++LL + YR + G QEVM+GYSDS KDAG AAW Y+AQE++V C E +++ LFH P + AI SQPPGSV G R+TEQGEM++ KFGLP A + L +Y AVL AT+ PP PP + WR +M++++ Q YRS V ENP+F+ YF ++TP+ ELG Sbjct: 464 SLGSYVISMAGAASDVLAVQLLLKEAGLT------RP-----MRVVPLFETLADLDNAGPVMQRLLGLPGYRAGL----RGPQEVMIGYSDSAKDAGTTAAAWAQYRAQENLVRICAEHQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPGIAEQNLNLYLAAVLEATLLPPPPP-QPAWREVMDQLAADGVQAYRSVVRENPDFVEYFRQSTPEQELG 688
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_PSEP1 (Phosphoenolpyruvate carboxylase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ppc PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.206e-56 Identity = 121/241 (50.21%), Postives = 155/241 (64.32%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 SLG YVISMA ASDVLAV+LL K+A L RP +RVVPLFET+ DL AG V+++LL + YR + G QEVM+GYSDS KDAG AAW Y+AQE++V C E +++ LFH P + AI SQPPGSV G R+TEQGEM++ KFGLP A + L +Y AVL AT+ PP PP + WR +M++++ Q YRS V ENP+F+ YF ++TP+ ELG Sbjct: 464 SLGSYVISMAGAASDVLAVQLLLKEAGLT------RP-----MRVVPLFETLADLDNAGPVMQRLLGLPGYRAGL----RGPQEVMIGYSDSAKDAGTTAAAWAQYRAQENLVRICAEHQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPGIAEQNLNLYLAAVLEATLLPPPPP-QPAWREVMDQLAADGVQAYRSVVRENPDFVEYFRQSTPEQELG 688
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_PSEU2 (Phosphoenolpyruvate carboxylase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ppc PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.494e-56 Identity = 121/241 (50.21%), Postives = 153/241 (63.49%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 SLG YVISMA +ASDVLAV+LL K++ L RP +RVVPLFET+ DL AG VI LL + YR + +G QEVM+GYSDS KDAG AAW Y+AQE +V C E +++ LFH P + AI SQPPGSV G R+TEQGEM++ KFGLP A + L +Y AVL AT+ PP PP + WR +M++++ YR+ V ENPEF+ YF +ATP+ ELG Sbjct: 467 SLGSYVISMAGSASDVLAVQLLLKESGLQ------RP-----MRVVPLFETLADLDNAGPVIETLLGLPGYRSRL----HGPQEVMIGYSDSAKDAGTTAAAWAQYRAQERLVEICREQQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPDIAEQNLNLYLAAVLEATLLPPPPP-QPAWRTMMDQMADDGVSAYRAVVRENPEFVEYFRQATPEQELG 691
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_PSEPG (Phosphoenolpyruvate carboxylase OS=Pseudomonas putida (strain GB-1) GN=ppc PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.494e-56 Identity = 121/241 (50.21%), Postives = 155/241 (64.32%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 SLG YVISMA ASDVLAV+LL K+A L RP +RVVPLFET+ DL AG V+++LL + YR + G QEVM+GYSDS KDAG AAW Y+AQE++V C E +++ LFH P + AI SQPPGSV G R+TEQGEM++ KFGLP A + L +Y AVL AT+ PP PP + WR LM++++ + YRS V ENP+F+ YF ++TP+ ELG Sbjct: 464 SLGSYVISMAGAASDVLAVQLLLKEAGLT------RP-----MRVVPLFETLADLDNAGPVMQRLLGLPGYRAGL----RGPQEVMIGYSDSAKDAGTTAAAWAQYRAQENLVRICAEHQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPGIAEQNLNLYLAAVLEATLLPPPPP-QPAWRELMDQLAADGVKAYRSVVRENPDFVEYFRQSTPEQELG 688
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_AMAHP (Phosphoenolpyruvate carboxylase OS=Amaranthus hypochondriacus PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 7.175e-56 Identity = 115/243 (47.33%), Postives = 154/243 (63.37%), Query Frame = 2 Query: 8 SDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 +DS G Y+ISMA+ SDVLAVELLQ++ + +P LRVVPLFE + DL+ A + +L SIDWY+ I NG QEVM+GYSDSGKDAGR +AAW+LYK QE ++ E+G+K+T+FH PT+LA+ SQPP ++ G+LR T QGE+++ FG R LE YT A L + PP P+ E WR LM+E++ I+ + YRS V + P F+ YF ATP+ E G Sbjct: 520 NDSFGAYIISMATAPSDVLAVELLQRECGIK------KP-----LRVVPLFEKLADLQSAAASMTRLFSIDWYKNRI----NGTQEVMIGYSDSGKDAGRLSAAWQLYKVQEQLIQVAKEYGVKLTMFHGRGGTVGRGGGPTHLALLSQPPDTIHGSLRVTIQGEVIEQSFGEEHLCFRTLERYTAATLEHGIDPPTSPKPE-WRALMDEMAVITTKEYRSVVLQEPRFVEYFRSATPELEYG 746
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_ACIAD (Phosphoenolpyruvate carboxylase OS=Acinetobacter sp. (strain ADP1) GN=ppc PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 7.175e-56 Identity = 117/241 (48.55%), Postives = 152/241 (63.07%), Query Frame = 2 Query: 11 DSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 +SLG Y+ISMA ASDVLAV LLQK+A + LRVVPLFET+ DL GA + L ++ WY++HI G EVM+GYSDS KDAG +A W Y+AQE++ A G+++TLFH PT A+ SQPPGS+ G +R TEQGEM++ KFGL A++ LEIYT A L AT+ PP P++E WR+LM +++ IS + YR TV ENP F+ Y TP+ EL Sbjct: 477 ESLGAYIISMAEYASDVLAVLLLQKEAGILQP-----------LRVVPLFETLKDLDGAAKTMETLFNMHWYKQHI----QGKHEVMIGYSDSAKDAGFMSANWAQYRAQEELTAVAKSHGVQLTLFHGRGGSISRGGAPTQQALFSQPPGSISGAIRVTEQGEMIRFKFGLEGVALQNLEIYTAATLEATLLPPPVPKQE-WRDLMHQMTDISVRVYRETVRENPHFVQYLRTVTPELEL 701
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_SHESH (Phosphoenolpyruvate carboxylase OS=Shewanella sediminis (strain HAW-EB3) GN=ppc PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56 Identity = 121/241 (50.21%), Postives = 153/241 (63.49%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 +LG YVISMAS SDVL V LL K E G P P +RVVPLFET+ DL A + L +IDWYR + GHQEVM+GYSDS KDAG AAW Y AQE++V + +K+TLFH P + AI SQPPGSV G +R TEQGEM++ KFGLP+ AV+ L +YT+AV+ AT+ PP P+ E WR M+++++ S YRS V + P+F+AYF ATP+ ELG Sbjct: 467 ALGSYVISMASKPSDVLTVLLLLK--------ETGCPHP---MRVVPLFETLDDLNNASSCMTALFAIDWYRGYT----KGHQEVMIGYSDSAKDAGVMAAAWAQYHAQEELVEVSRQAEVKLTLFHGRGGTIGRGGGPAHEAILSQPPGSVDGRIRVTEQGEMIRFKFGLPKLAVQSLALYTSAVMEATLLPPPEPKPE-WRACMQKLAEESVDAYRSIVRDEPDFVAYFRAATPEVELG 691
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_PSEPF (Phosphoenolpyruvate carboxylase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ppc PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56 Identity = 124/241 (51.45%), Postives = 154/241 (63.90%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 SLG YVISMA ASDVLAV+LL K+ SG L RP +RVVPLFET+ DL AG VI +LL + YR + G QEVM+GYSDS KDAG AAW Y+AQE +V C E +++ LFH P + AI SQPPGSV G R+TEQGEM++ KFGLP A + L +Y AVL AT+ PP PP E WR+LM+E++ YR+ V ENP+F+ YF ++TP+ ELG Sbjct: 465 SLGSYVISMAGAASDVLAVQLLLKE-----SGVL-RP-----MRVVPLFETLADLDNAGPVIERLLLLPGYRARL----QGPQEVMIGYSDSAKDAGTTAAAWAQYRAQERLVEICREQQVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRTTEQGEMIRFKFGLPDIAEQNLNLYLAAVLEATLLPPPPPTPE-WRHLMDELAADGVAAYRAVVRENPQFVEYFRQSTPEQELG 689 The following BLAST results are available for this feature:
BLAST of FC930444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 229
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930444 ID=FC930444; Name=FC930444; organism=Citrus clementina; type=EST; length=736bpback to top |