FC930444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_SHIDS (Phosphoenolpyruvate carboxylase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ppc PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.308e-54 Identity = 115/241 (47.72%), Postives = 149/241 (61.83%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 S+ YVISMA SDVLAV LL K+A + G + V PLFET+ DL A V+ +LL+IDWYR I G Q VM+GYSDS KDAG A+W Y+AQ+ ++ C + GI++TLFH P + A+ SQPPGS+ G LR TEQGEM++ K+GLP+ V L +YT A+L A + PP P +E WR +M+E+S ISC YR V EN +F+ YF ATP+ ELG Sbjct: 468 SIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEITVSSLSLYTGAILEANLLPP-PELKESWRRIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELG 692
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_CITK8 (Phosphoenolpyruvate carboxylase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ppc PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.308e-54 Identity = 112/241 (46.47%), Postives = 150/241 (62.24%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 S+ YVISMA SDVLAV LL K+A ++ + + V PLFET+ DL A V+ +LL+IDWYR I G Q VM+GYSDS KDAG A+W Y+AQ+ ++ C + GI++TLFH P + A+ SQPPGS+ G LR TEQGEM++ K+GLP+ + L +YT A+L A + PP P+ WR++M+E+S ISC YR V EN +F+ YF ATP+ ELG Sbjct: 468 SIAAYVISMAKTPSDVLAVHLLLKEAGISFA-----------MPVAPLFETLDDLNNADAVMTQLLNIDWYRGFI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEVTISSLSLYTGAILEANLLPPPEPK-NSWRHIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELG 692
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_ECO81 (Phosphoenolpyruvate carboxylase OS=Escherichia coli O81 (strain ED1a) GN=ppc PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.014e-54 Identity = 115/241 (47.72%), Postives = 149/241 (61.83%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 S+ YVISMA SDVLAV LL K+A + G + V PLFET+ DL A V+ +LL+IDWYR I G Q VM+GYSDS KDAG A+W Y+AQ+ ++ C + GI++TLFH P + A+ SQPPGS+ G LR TEQGEM++ K+GLP+ V L +YT A+L A + PP P+ E WR +M+E+S ISC YR V EN +F+ YF ATP+ ELG Sbjct: 468 SIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPK-ESWRCIMDELSVISCDVYRGYVRENKDFVPYFRSATPEQELG 692
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_YERE8 (Phosphoenolpyruvate carboxylase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ppc PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.715e-54 Identity = 116/241 (48.13%), Postives = 149/241 (61.83%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 S+ YVISMA SDVLAV LL K+A CP TL V PLFET+ DL A V+ +LL+IDWYR I G Q VM+GYSDS KDAG A+W Y+AQ+ ++ C + GI +TLFH P + A+ SQPPGS+ G LR TEQGEM++ KFGLP+ + L +Y +AVL A + PP P++E W +M+ +S SC+ YR V ENP+F+ YF ATP+ ELG Sbjct: 467 SIAAYVISMAKVPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNADDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGISLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYASAVLEANLLPPPEPKKE-WNEVMDILSDASCEMYRGYVRENPQFVPYFRAATPELELG 691
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_SHIBS (Phosphoenolpyruvate carboxylase OS=Shigella boydii serotype 4 (strain Sb227) GN=ppc PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.715e-54 Identity = 114/241 (47.30%), Postives = 148/241 (61.41%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 S+ YVISMA SDVLAV LL K+A + G + V PLFET+ DL A V+ +LL+IDWYR I G Q VM+GYSDS KDAG A+W Y+AQ+ ++ C + GI++TLFH P + A+ SQPPGS+ G LR TEQGEM++ K+GLP+ V L +YT A+L A + PP P+ E WR +M+E+S ISC YR V EN +F+ Y ATP+ ELG Sbjct: 468 SIAAYVISMAKTPSDVLAVHLLLKEAGI-----------GFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIRTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPK-ESWRRIMDELSVISCDVYRGYVRENKDFVPYLRSATPEQELG 692
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_ACIBT (Phosphoenolpyruvate carboxylase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=ppc PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.715e-54 Identity = 115/241 (47.72%), Postives = 148/241 (61.41%), Query Frame = 2 Query: 11 DSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 +SLG Y+ISMA SDVLAV LLQK+A + LRVVPLFET+ DL GA + L ++ WY++HI G EVM+GYSDS KDAG +A W Y+AQE++ A + G+++TLFH PT A+ SQPPGS+ G +R TEQGEM++ KFGL A++ LEIYT A L AT+ PP P+ E WR LM ++ S + YR TV ENP F+ Y TP+ EL Sbjct: 477 ESLGAYIISMAEYPSDVLAVLLLQKEAGIQ-----------HPLRVVPLFETLKDLDGAATTMNTLFNMHWYKQHI----QGKHEVMIGYSDSAKDAGFMSANWAQYRAQEELTAIARKHGVQLTLFHGRGGSISRGGAPTQQALFSQPPGSISGAIRVTEQGEMIRFKFGLEGIAMQNLEIYTAATLEATLLPPPEPKAE-WRELMNRMTDHSVKVYRQTVRENPHFVKYLRTVTPELEL 701
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP1_MESCR (Phosphoenolpyruvate carboxylase 1 OS=Mesembryanthemum crystallinum GN=PPCA PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.715e-54 Identity = 110/243 (45.27%), Postives = 156/243 (64.20%), Query Frame = 2 Query: 8 SDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 SDS G YVISMA+ SDVLAVELLQ++ ++ +P LRVVPLFE + DL A + +L S+DWY+ I +G QEVM+GYSDSGKDAGR +AAW++YK QE+++ +FG+K+T+FH PT+LAI +QP ++ G+LR T QGE+++ FG R L+ YT A L M PP+ P+ E WR L+++++ ++ + YRS V++ P F+ YF ATP+ E G Sbjct: 521 SDSFGAYVISMATAPSDVLAVELLQRECKVK------KP-----LRVVPLFEKLADLEAAPASMTRLFSVDWYKNRI----DGKQEVMIGYSDSGKDAGRLSAAWQMYKVQEELLKVSKKFGVKLTMFHGRGGTVGRGGGPTHLAILAQPAETIGGSLRVTIQGEVIEQSFGEQHLCFRTLQRYTAATLEHGMNPPKSPKPE-WRALLDQMAVVATEEYRSIVFKEPRFVEYFRLATPETEYG 747
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_PHOPR (Phosphoenolpyruvate carboxylase OS=Photobacterium profundum GN=ppc PE=3 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 8.771e-54 Identity = 114/242 (47.11%), Postives = 150/242 (61.98%), Query Frame = 2 Query: 11 DSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 ++LG YVISMA ASDVLAV LL K+A CP L V PLFET+ DL VI++L+SIDWYR I HQ VM+GYSDS KDAG A W Y+A E++V C + +++TLFH P + A+ SQPP S+ G LR TEQGEM++ K GLP AV L +Y +A L A + PP P++E W +LM+ +S++SC++YR+ V + EF+ YF ATP+ ELG Sbjct: 464 EALGAYVISMARTASDVLAVHLLLKEAG----------CPF-RLDVCPLFETLDDLNNGASVIKELMSIDWYRGFI----QNHQMVMIGYSDSAKDAGVMAAGWAQYRAMEELVEVCEDASVELTLFHGRGGSIGRGGAPAHAALLSQPPRSLKGGLRVTEQGEMIRFKLGLPDVAVNSLSLYASATLEANLLPPPAPKKE-WCDLMDVLSEVSCESYRNVVRGSEEFVPYFRAATPELELG 689
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_YERPY (Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ppc PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53 Identity = 117/241 (48.55%), Postives = 147/241 (61.00%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 S+ YVISMA SDVLAV LL K+A CP TL V PLFET+ DL A V+ +LL IDWYR I G Q VM+GYSDS KDAG A+W Y+AQ+ ++ C + GI +TLFH P + A+ SQPPGS+ G LR TEQGEM++ KFGLP+ + L +Y A+L A + PP P++E W +M+ +S SC YRS V ENPEF+ YF ATP+ ELG Sbjct: 467 SIAAYVISMAKVPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKE-WIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELG 691
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_YERPS (Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis GN=ppc PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53 Identity = 117/241 (48.55%), Postives = 147/241 (61.00%), Query Frame = 2 Query: 14 SLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 S+ YVISMA SDVLAV LL K+A CP TL V PLFET+ DL A V+ +LL IDWYR I G Q VM+GYSDS KDAG A+W Y+AQ+ ++ C + GI +TLFH P + A+ SQPPGS+ G LR TEQGEM++ KFGLP+ + L +Y A+L A + PP P++E W +M+ +S SC YRS V ENPEF+ YF ATP+ ELG Sbjct: 467 SIAAYVISMAKVPSDVLAVHLLLKEAG----------CPF-TLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLI----QGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKE-WIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELG 691 The following BLAST results are available for this feature:
BLAST of FC930444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 229
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930444 ID=FC930444; Name=FC930444; organism=Citrus clementina; type=EST; length=736bpback to top |