FC930447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.850e-30 Identity = 77/200 (38.50%), Postives = 114/200 (57.00%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQ 710 YD + FSPEGRL+QVEY++EAI +AIGI +K+GVVL EK+ TS LL+ S S EK+ +ID H+ CA++G+ +DA +I AR A + Y E + VE L QS+CD + + RPFGV+ L AG D + G+QL+ ++PSG + + + L ++ ++ E+ L LK +Q Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLE-SDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQ 206
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.722e-30 Identity = 71/190 (37.37%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 YD ++FSP+GRL QVEY EA+ +AI + + +V+ E+K KL Q ++ +K+ +D+HV A AG+ +DA ILI+ ARV+AQ + +P+ +E L + + +Q YTQ GG+RPFGVS L AG+D ++Y ++P+G Y WK L++++K+ +SR E+ LA+ Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKL-QNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLAV 192
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA3_YEAST (Proteasome component C1 OS=Saccharomyces cerevisiae GN=PRE10 PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 65/156 (41.67%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK 596 YD ++FSP+GR +QVEYA++A+ N ++IGI DGVV EK +TSKLL + K+ +D H+ C +G++ D L+N R +A + Y+ P+P+ L Q +T + +RPFGVS +F G DKN G LYM +PSG+Y G+K Sbjct: 8 YDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNV-KIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKN-GAHLYMLEPSGSYWGYK 161
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGW 593 YD + FSP+GR++QVEYAM+A+ N+ +AIGI KDGVV EK V SKL + S ++++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W Sbjct: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEG-SNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYW 162
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA1_DICDI (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum GN=psmA1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 66/157 (42.04%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 126 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK 596 +YDS T FSP GR++Q+EYAMEA+ G+A+ + SK VLV K+ +S+L + +K++ +DDHV A++G+ +DA +L N R + Y Y Y+ M VE+LV + D Q +TQ G RP+GV L AG+D+ G +Y + PSGN+ +K Sbjct: 5 QYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSEL---GSYQKKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHTQRYGRRPYGVGLLVAGYDQ-LGAHIYQTCPSGNFYDYK 157
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29 Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGW 593 YD + FSP+GR++QVEYAM+A+ N+ +AIGI KDGVV EK V SKL + S ++++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W Sbjct: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEG-SNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYW 162
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29 Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGW 593 YD + FSP+GR++QVEYAM+A+ N+ +AIGI KDGVV EK V SKL + S ++++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W Sbjct: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEG-SNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYW 162
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29 Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGW 593 YD + FSP+GR++QVEYAM+A+ N+ +AIGI KDGVV EK V SKL + S ++++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W Sbjct: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEG-SNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYW 162
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29 Identity = 68/193 (35.23%), Postives = 107/193 (55.44%), Query Frame = 3 Query: 117 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 MS RYD TIFSP+G L QVEYA EA+ +A+G+ + VVL EKK ++L Q K+ +D+HV A AG+ +DA I+IN A+V+ Q + ++P+ +E + + + KQ YTQ G RPFG+S L G+D + L+ ++PSG + +K ++ Y+++ E ++ L Sbjct: 1 MSSRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQL-QEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKL 192
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.197e-28 Identity = 68/180 (37.78%), Postives = 101/180 (56.11%), Query Frame = 3 Query: 120 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYK 656 S +D TIFSPEGRLYQVEYA +AI G +++ + KD V+V +KKV KLL +ST T ++KI +++ C + G+ +D+ + AR +A + Y Y +PV+ L + + D Q YTQ +RP G + G D+ G Q+Y DP+G Y G+K S L++ K Sbjct: 6 SAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTH-LFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVK 184 The following BLAST results are available for this feature:
BLAST of FC930447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930447 ID=FC930447; Name=FC930447; organism=Citrus clementina; type=EST; length=714bpback to top |