FC930447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.109e-33 Identity = 79/193 (40.93%), Postives = 115/193 (59.59%), Query Frame = 3 Query: 117 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 M Y T FSP G+L Q+E+A++A + GSAIGI +K+GVVL+ EKK+ S L TS +K+ I +++ AG+ D+ +LI AR ++++Y Y+E +PV QLV+ L Q +TQ GG+RPFGVS L AG+D+ G LY DPSG+Y WK + L++ Y DD+ ++ AL Sbjct: 1 MDSDYSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHS--LVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEIEDAIQTAL 190
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33 Identity = 81/190 (42.63%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 YD TIFSP+GRLYQVEYA EA+ ++IGI ++DGVVLV +K++ S L++ TS EK++K DDH+ A AG ++DA LI+ AR QAQ Y EP+ VE L +++ D Q YTQ GG RPFGV+ + G + +LY +DPSG W+ L++ Y + + LAL+ Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMER-TSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIEDGEP-RLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALE 197
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.597e-33 Identity = 74/189 (39.15%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 YD T+FSP+G L+QVEYA EA+ +A+G+ KD VVL EKK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK L+++Y D+ + ++ L Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKL 190
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.013e-33 Identity = 73/189 (38.62%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 YD T+FSP+G L+QVEYA EA+ +A+G+ +D VVL EKK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK L+++Y D+ + ++ L Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKL 190
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 8.013e-33 Identity = 76/199 (38.19%), Postives = 112/199 (56.28%), Query Frame = 3 Query: 117 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVA------GIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 M+ RYD T+FSP+G L+QVEYA EA+ +A+GI + VVL EKK +KL Q + K+ +DDHV A A G+ +DA ++IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK L+++Y +D +S ++ L Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKL-QDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKL 198
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.047e-32 Identity = 75/184 (40.76%), Postives = 103/184 (55.98%), Query Frame = 3 Query: 144 TIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 T FSP GRL Q+EYA A +A+G+ + DGVV+ EKK TS L + T K++ +DDHV C +GI D +L++ AR QRY Y EPMP+ QLV+ + Q +TQ GG+RPFG S L AG D G LY DPSG + WK + L++ Y +++ ++ AL Sbjct: 9 TTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLT-LHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSR-GNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTAL 190
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 1.367e-32 Identity = 75/191 (39.27%), Postives = 106/191 (55.50%), Query Frame = 3 Query: 123 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 R Y T FSP G+L Q+EYA+ A+ ++GI + +GVVL EKK S +L S K+ I H+ +G+ D +L+ AR AQ+Y YQEP+P QLVQ + Q YTQ GG+RPFGVS L AGWD++ + L+ SDPSG Y WK + L++ Y +D+ ++ A+ Sbjct: 4 RGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKS-ILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPY-LFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLELEDAIHTAI 192
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.785e-32 Identity = 75/191 (39.27%), Postives = 105/191 (54.97%), Query Frame = 3 Query: 123 RRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 R Y T FSP G+L Q+EYA+ A+ ++GI + +GVVL EKK S +L S K+ I H+ +G+ D +L+ AR AQ+Y YQEP+P QLVQ + Q YTQ GG+RPFGVS L AGWD+ + L+ SDPSG Y WK + L++ Y +D+ ++ A+ Sbjct: 4 RGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKS-ILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPY-LFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32 Identity = 67/190 (35.26%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 YD T+FSP+G L+QVEYA EA+ A+G+ KD ++ EKK KL Q S +T K+YK+D+H+ A AG+ +DA +++N A+++ QR+ +Y++ + V+ LV+ + +Q TQ G RP+GVS + G+++N QL+ ++PSG W ++++Y+D ++R A+K Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKL-QDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIK 191
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.045e-32 Identity = 81/189 (42.86%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 YD TIFSP+GRLYQVEYA EA+ ++IG+ + DGVVL +K++ S L++ S S EK++K DDH+ A AG ++DA LI+ AR QAQ Y EP+ VE L + + D Q YTQ GG RPFGV+ + G N +L+ +DPSG WK L++ Y + + E LAL Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERS-SVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGG-IVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLAL 196 The following BLAST results are available for this feature:
BLAST of FC930447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930447 ID=FC930447; Name=FC930447; organism=Citrus clementina; type=EST; length=714bpback to top |