FC930450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25 Identity = 62/149 (41.61%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 201 KRILKELKDLQK-DPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS-DKAKYEPTARSWTQKYAMG 635 KR+ KE Q D PV + DMFHW+A I GP+++PY GG +++ IH YP PP V F+TK+ HPNI+ +NG +C+DILK WSPA ++ L+I SLL++ + PL + A + ++ DK Y R T YA G Sbjct: 6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.058e-24 Identity = 57/143 (39.86%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 198 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQKY 626 SKR+ KEL +L SA P E++F W TI GP ++ Y+G + +++ FP YP+ P V F T FHPN++ G+ICLDILK++WS + +LLSI SLL +PN + PL + A M+ +D+ +Y+ ++ +K+ Sbjct: 34 SKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW-NDQKEYKKYLDAFYEKH 175
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.058e-24 Identity = 52/134 (38.81%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 198 SKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 596 +KR+ EL L SA P ++ ++ HW TI GPSD+ Y G F +++ FP +YP+ PP + F + ++HPN++ +G+ICLDILK++WS + +LLS+ SLL +PN PL + A ++ D +Y+ Sbjct: 30 TKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYK 163
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.381e-24 Identity = 56/138 (40.58%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 207 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQ 620 + KE+ L DPP P ED+ Q TI GP +PYAGG+F + + D+P PPK F TK+FHPN+ +NG IC+++LK W+ L I VLL+I LL PNP+ L E + + +Y AR T+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.381e-24 Identity = 56/138 (40.58%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 207 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQ 620 + KE+ L DPP P ED+ Q TI GP +PYAGG+F + + D+P PPK F TK+FHPN+ +NG IC+++LK W+ L I VLL+I LL PNP+ L E + + +Y AR T+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24 Identity = 56/138 (40.58%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 207 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQ 620 + KE+ L DPP P ED+ Q TI GP +PYAGG+F + + D+P PPK F TK+FHPN+ NG IC+++LK W+ L I VLL+I LL PNP+ L E + + +Y AR T+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24 Identity = 56/138 (40.58%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 207 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQ 620 + KE+ L DPP P ED+ Q TI GP +PYAGG+F + + D+P PPK F TK+FHPN+ NG IC+++LK W+ L I VLL+I LL PNP+ L E + + +Y AR T+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24 Identity = 54/153 (35.29%), Postives = 90/153 (58.82%), Query Frame = 3 Query: 195 ASKRIL-KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTAR 608 AS+++L K+LK++QK+PP S G V + +F W+ I+GP D+ Y GG F T+ FP DYP PPK+ F T+++HPN++ NG +C+ IL E+W P + +L+S+ S+L+ PN + P + A ++ + +++ R Sbjct: 5 ASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVR 157
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24 Identity = 56/138 (40.58%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 207 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQ 620 + KE+ L DPP P ED+ Q TI GP +PYAGG+F + + D+P PPK F TK+FHPN+ NG IC+++LK W+ L I VLL+I LL PNP+ L E + + +Y AR T+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 3.077e-24 Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 213 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 584 ++L +L K+P SAG + + D++ W+ I+GP D+ Y GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D+ Sbjct: 12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149 The following BLAST results are available for this feature:
BLAST of FC930450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930450 ID=FC930450; Name=FC930450; organism=Citrus clementina; type=EST; length=718bpback to top |