FC930450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34 Identity = 63/143 (44.06%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQK 623 A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP KPP V F +KVFHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P A +YK ++ +YE ++ ++ Sbjct: 5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQ 147
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.246e-33 Identity = 67/146 (45.89%), Postives = 92/146 (63.01%), Query Frame = 3 Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----EPTARSWT 617 A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ K +Y E +SWT Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWT 150
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33 Identity = 67/146 (45.89%), Postives = 92/146 (63.01%), Query Frame = 3 Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----EPTARSWT 617 A KR++++ K LQ DPP S P ++ W A I GP D+P+ GG F +++ F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ +K +Y E +SWT Sbjct: 5 ARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWT 150
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33 Identity = 65/144 (45.14%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 201 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQKYAM 632 KRI+KE++ L +DPP A P +++ +++ T+ GP S Y GG F + + P +YP PP V F TK++HPN++ G ICL LK+ WSPAL I VLLSI +L+ PNPDDPL ++A ++K ++ + AR WT+KYA+ Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.777e-33 Identity = 65/145 (44.83%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 198 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQKYA 629 S+RI KEL D+Q+D + +D+ H + GP +PY GG F+V I P DYPF+PPK+ F TK++HPN++S G+ICLDILK+QWSP T+ L+S+ SLL P P +P ++A +Y + ++ TAR WT YA Sbjct: 6 SRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYA 150
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33 Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 3 Query: 198 SKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQKYA 629 +KRI+KE++ ++ DP + V+E D+ H + T +GP +PY GG F+V I P +YPFKPPK+ F TKV+HPNI+S G+ICLDILK WSP +T+ L+S+ +LL P P+DP E+A Y D+ + TA WT+ YA Sbjct: 4 AKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 149
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.185e-33 Identity = 67/143 (46.85%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 201 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQKYA 629 KRI+KE + L DP +A P +++ ++Q TI GP SPY G+F + ++ P DYP + PKV F TK++HPNI+ G ICLD+LK WSPAL I VLLSI +LL PNP+DPL ++A + ++ + AR WT+ YA Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32 Identity = 59/143 (41.26%), Postives = 91/143 (63.64%), Query Frame = 3 Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEPTARSWTQK 623 A +R++++ K +Q DPP SA PVA+++ W A I+GP+D+P+ G F + +HF YP KPP V F +++FHPN+ G +CLDIL+ +WSP ++ +L SI SLL DPN P E +++YK ++ +Y R +K Sbjct: 5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEK 147
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 60/134 (44.78%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 596 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F +TI F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138
BLAST of FC930450 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 60/134 (44.78%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 596 A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F +TI F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE Sbjct: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 The following BLAST results are available for this feature:
BLAST of FC930450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930450 ID=FC930450; Name=FC930450; organism=Citrus clementina; type=EST; length=718bpback to top |