FC930453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_ENTFA (Chaperone protein clpB OS=Enterococcus faecalis GN=clpB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 59/200 (29.50%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPA--STTLIKVIRRAQAAQKAHGDTHLAVDQLILGL--LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEENRKGVRI 710 MN +K T EAIA A ++A + H + HL L P+ +AG + A E + A+ + PS + S L +++ A + ++ D L+ + ++L L L++ ++ + G+ ++ +E++RG G +V S + + ++AL+ YG DLV+Q AGK DP+IGRDEE R +RI Sbjct: 1 MNIEKMTTTLQEAIAEAQKVAVTRQHQEIDIAHLWKIFLQ-PNHFGRNFYTDAGLDVDAFERE--VDNALDEYPSVAGGNVQYGQNLSQNLFHLLQEADSLREEFQDEFLSTEIVLLALMKLKNYRLTKYLMQQGITEKELRKNIEEMRG--GDRVTSQNQEEQYKALEKYGVDLVQQVKAGKQDPIIGRDEEIRDVIRI 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_CORDI (Chaperone protein clpB OS=Corynebacterium diphtheriae GN=clpB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 57/192 (29.69%), Postives = 90/192 (46.88%), Query Frame = 3 Query: 147 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 T KT EA+ A + A++AG+ P HL A+L GI + G + E + KLP A P + + V+ AQ GD +++ + L+ + + +L + G +K +RG +KV + S + FQAL+ Y DL +A GK+DPVIGRD+E R+ V++ Sbjct: 7 TTKTQEALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVDPDVVRREA--EALVAKLPKAEGANLANPNFNRDALSVLNNAQELAGELGDEYVSTEVLLAAVARGTNDAAELLTKRGATYDVIKGVFPSVRGN--KKVTTESPEDQFQALEKYSTDLTARAREGKIDPVIGRDQEIRRVVQV 194
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_HELPJ (Chaperone protein clpB OS=Helicobacter pylori J99 GN=clpB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 52/186 (27.96%), Postives = 92/186 (49.46%), Query Frame = 3 Query: 138 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEE 689 +K T + +E + A LA +A+ TP+H+ A+L++ GI QA+ + A V ++ K + I + LI+ + AQ GD+ +A D LL + + + + + ++ +E LR +GR ++ + D+ ++L+ +G DL ++A KLDPVIGRDEE Sbjct: 5 EKMTDQLHETLDSAIALALHHKNAEVTPMHMLFAMLNNSQGILIQALQKMPVDIEALKLS-VQSELNKFAKVSQISKQNIQLNQALIQSLENAQGLMAKRGDSFIATDAY---LLANMNLFESVLKPYLDTKELQKTLESLR--KGRTIQDKNDDSNLESLEKFGIDLTQKALENKLDPVIGRDEE 184
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_HELPY (Chaperone protein clpB OS=Helicobacter pylori GN=clpB PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 52/186 (27.96%), Postives = 93/186 (50.00%), Query Frame = 3 Query: 138 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEE 689 +K T + +E + A LA +A+ TP+H+ A+L++ GI QA+ + A V ++ K + I + LI+ + AQ GD+ +A D + LL + + + + + ++ +E LR +GR ++ + D+ ++L+ +G DL ++A KLDPVIGRDEE Sbjct: 5 EKMTDQLHETLDSALALALHHKNAEVTPMHMLFAMLNNSQGILIQALQKMPVDIQALRLS-VQSELNKFAKVSQISKQNIQLNQALIQSLENAQGLMAKRGDSFIATD---VYLLANMGLFESVLKPYLDAKELQKTLESLR--KGRTIQDKNDDSNLESLEKFGIDLTQKALENKLDPVIGRDEE 184
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_LACLA (Chaperone protein clpB OS=Lactococcus lactis subsp. lactis GN=clpB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 3 Query: 384 STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEENRKGVRI 710 S L ++ A + GD +L+ + ++L L E Q + G+ A+ ++ +EKLRG G KV S + + T++AL+ YG DLV Q +GK DPVIGRDEE R +R+ Sbjct: 85 SPDLFQIFTEADKIAQKMGDEYLSTEIILLALFELKQNPLTSYLVSHGLTKAKAQAAIEKLRG--GDKVTSQNAEETYKALEKYGVDLVAQVKSGKQDPVIGRDEEIRDVIRV 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_LACLM (Chaperone protein clpB OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpB PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 3 Query: 384 STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEENRKGVRI 710 S L +V A + GD +L+ + ++L L E Q + + G+ A+ ++ +EKLRG G KV S + + T++AL+ YG DLV Q +G DPVIGRDEE R +R+ Sbjct: 85 SPDLFQVFTEADKIAQKMGDEYLSTEIILLALFELKQNPLTEYLVSHGLTKAKAQAAIEKLRG--GDKVTSQNAEETYKALEKYGVDLVAQVKSGNQDPVIGRDEEIRDVIRV 195 The following BLAST results are available for this feature:
BLAST of FC930453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930453 ID=FC930453; Name=FC930453; organism=Citrus clementina; type=EST; length=712bpback to top |