FC930453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_WOLPM (Chaperone protein clpB OS=Wolbachia pipientis wMel GN=clpB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22 Identity = 70/199 (35.18%), Postives = 103/199 (51.76%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLP-SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M+ +KFT K I A A AGH F P HL +L D SG+ IN GG QS + A+KKLP + P + S + KV + K + D+ +AV++L+ GL +D +G + E GV ++ S V ++R +G +S + + A K Y +D+ E A GKLDPVIGRDEE R+ +++ Sbjct: 1 MDLNKFTEKAKSLIQSAQMKALGAGHQIFMPEHLLKVMLEDESGLVQDLINACGGN--VQSISDAVDSAIKKLPVIEGPGSGGLQLSREIAKVFEDSIGIAKRNKDSFVAVERLLQGLTAQKDDTVGKILAENGVTPQKLNSVVAEMR--KGSSADSPNSEEKLNAAKKYTKDVTELAMQGKLDPVIGRDEEIRRTMQV 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_NITEU (Chaperone protein clpB OS=Nitrosomonas europaea GN=clpB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22 Identity = 68/197 (34.52%), Postives = 98/197 (49.75%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M DKFT K +A+A A +A H P HL +AL+ G + AG AQ Q++K LP EI S L ++ + GD ++A + +L LED + G L K+ G A ++ V+ +RG G KV A + + +ALK Y DL E+A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRFDKFTTKFQQALADAQSMALGQDHPYIEPQHLLLALMQQDDGSITSLLQRAGVN--AQPLRQALTQSLKLLPKVEGTGGEINVSRDLANLLNLTDKEAQKRGDQYIASEMFLLAALEDKGETGRLLKQYGATRAALEQAVDSVRG--GEKVTDAEAEGSREALKKYTLDLTERARSGKLDPVIGRDDEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.391e-22 Identity = 71/199 (35.68%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA-QSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 + P+K T KT EA+A A +LA G+ P HL V+LL G+ A I GG AA +SA V +K+LP + A + S L +++ AQ D ++ + L+LG D Q +AGV+ V + + ++RG G +V + + T+QAL Y RDL + A GKLDPVIGRD+E R+ +++ Sbjct: 2 IRPEKMTIKTQEALAGAQQLAARQGNGSIEPEHLLVSLLEQEGGLIAPIIQKVGGAPAALRSAADVL---VKRLPQVSGATAQAYLSPALNRILDAAQREADTMKDEFVSTEHLLLGFFADRQCAAARALLDAGVSRDNVLAALMEIRG--GERVTDQNPEDTYQALAKYARDLTDLARQGKLDPVIGRDDEIRRVLQV 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_RHILO (Chaperone protein clpB OS=Rhizobium loti GN=clpB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 63/198 (31.82%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLV--EQAGKLDPVIGRDEENRKGVRI 710 MN +K++ + I A +A S H QFTP H+ L+ D G+ A I AGG + + A++ +P ++ + L KV A+ K GD+ + V++L+ L + + ++ D+ +AGV + + +R +GR +SAS + + ALK Y RDL +AGKLDPVIGRD+E R+ +++ Sbjct: 1 MNLEKYSERVRGFIQSAQTMALSRNHQQFTPEHILKVLVDDDEGLAASLIERAGGN--VRDVKLGVETALEAMPKVEGGNGQLYLAQPLAKVFSTAEELAKKAGDSFVTVERLLQALTMEKSAKTADILAKAGVTAQALNQVINDVR--KGRTADSASAEQNYDALKKYARDLTADARAGKLDPVIGRDDEIRRTIQV 194
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNPX (Chaperone protein clpB 1 OS=Synechococcus sp. (strain WH8102) GN=clpB1 PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 66/199 (33.17%), Postives = 109/199 (54.77%), Query Frame = 3 Query: 123 VQMNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 +Q ++FT + AI A +LA ++ H Q HL +ALL +G+ + ++ G + + E +++LPS APD + +L K + RA+ + GD+ +A++ L+L L ED + G L +AGV +K + +RG + V + + T+++L YGRDL A G+LDPVIGRDEE R+ ++I Sbjct: 1 MQPTAEQFTEQAWAAIVAAQQLAQASRHQQLETEHLLLALLRQ-NGLAGRILSKTGVD--VTTFEASVEGHLQRLPSLGSAPDSVFLGRSLNKALDRAEQRRDGFGDSFIAIEHLLLALAEDDRCGRQLLSQAGVTTNTLKEAITAVRGNQ--TVTDQNPEATYESLAKYGRDLTAAARDGQLDPVIGRDEEIRRTIQI 194
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_PASMU (Chaperone protein clpB OS=Pasteurella multocida GN=clpB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21 Identity = 62/196 (31.63%), Postives = 101/196 (51.53%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MN +KFT K +A+ A LA + P+HL ALL+ G A + +G E N + KLP + + ++ S +L+ ++ + D ++ + +L LED +GD+ K+ GV ++ +EK+RG G+ V + + + QAL+ Y DL +A GKLDPVIGRDEE R+ +++ Sbjct: 1 MNIEKFTTKFQQALQEAQSLAIGKDNQFIEPVHLLTALLNQQGGSTAPILTASGANLPLLRNE--LNAELSKLPQVSGSGGDVQVSRSLVNLLNLCDKLAQQRQDKFISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRG--GQNVNDPNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQV 192
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21 Identity = 67/197 (34.01%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T+K A+A A LA + PLHL ALL+ G + + +A G NA Q + NQA+ +LP ++ S L++V+ + GD ++ + +L LE + D+ K AG A + +E++RG G V + QALK Y DL E+A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSA-GINAGQLRTDI-NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21 Identity = 67/197 (34.01%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T+K A+A A LA + PLHL ALL+ G + + +A G NA Q + NQA+ +LP ++ S L++V+ + GD ++ + +L LE + D+ K AG A + +E++RG G V + QALK Y DL E+A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSA-GINAGQLRTDI-NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21 Identity = 67/197 (34.01%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T+K A+A A LA + PLHL ALL+ G + + +A G NA Q + NQA+ +LP ++ S L++V+ + GD ++ + +L LE + D+ K AG A + +E++RG G V + QALK Y DL E+A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSA-GINAGQLRTDI-NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_SALTY (Chaperone protein clpB OS=Salmonella typhimurium GN=clpB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 67/197 (34.01%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T+K A+A A LA + PLHL ALL+ G + +A G NA Q +QA+ +LP ++ S+ L++V+ + GD ++ + +L LE + DL K AG A + +E++RG G V + QALK Y DL E+A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSA-GINAGQ-LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQV 193 The following BLAST results are available for this feature:
BLAST of FC930453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930453 ID=FC930453; Name=FC930453; organism=Citrus clementina; type=EST; length=712bpback to top |