FC930453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_SALTI (Chaperone protein clpB OS=Salmonella typhi GN=clpB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 67/197 (34.01%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T+K A+A A LA + PLHL ALL+ G + +A G NA Q +QA+ +LP ++ S+ L++V+ + GD ++ + +L LE + DL K AG A + +E++RG G V + QALK Y DL E+A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSA-GINAGQ-LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_GLOVI (Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 66/196 (33.67%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 132 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 NP++FT K +AI E+A Q HL ALL G+ A +I G N + E V Q + + P T + +L ++ RA+ +K +GD ++++ L+L +D + G + +E + A++K+ V ++RG + KV S + ++T+++L YGRDL + A GKLDPVIGRDEE R+ ++I Sbjct: 5 NPNQFTEKAWDAIVRTTEVAKEYRQQQLESEHLFKALLDQDGGL-AGSIFTKAGVNLTKLGERV-EQFINRQPKLTNPGQSVYLGRSLDALLDRAEGFRKEYGDDFISIEHLVLAFAKDVRFGQQILREFSLDEAKLKAVVAQVRGNQ--KVTSQNPESTYESLDKYGRDLTQLAREGKLDPVIGRDEEIRRTIQI 196
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 66/197 (33.50%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T+K A+A A LA + PLHL ALL+ G + + +A G NA Q + NQA+ +LP ++ S L++V+ + GD ++ + +L LE + D+ K G A + +E++RG G V + QALK Y DL E+A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSA-GINAGQLRTDI-NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKATGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20 Identity = 70/201 (34.83%), Postives = 114/201 (56.72%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTP--APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M+ KFT K+ +A+A A +A GH + HLA AL+ G+ + ++ G + A AE + + K+ P AP +I S L V+ +AQ + D +++V+ + LLE+ + +G + +E ++ +V +E +RG + +V SA+ + T++AL+ YGRDLVE+A GKLDPVIGRD E R+ +RI Sbjct: 1 MDIGKFTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKPEA-FAEALERELGKRPAVSGPGAAPGQIFVSKRLNAVLVKAQDFARQLKDEYVSVEHIFCVLLEEPASTIMGRIAREFSLSREKVLGVLEDVRGSQ--RVTSANPEDTYEALQKYGRDLVEEARKGKLDPVIGRDAEIRRVIRI 198
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20 Identity = 67/195 (34.36%), Postives = 107/195 (54.87%), Query Frame = 3 Query: 141 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLDPVIGRD+E R+ ++I Sbjct: 4 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIGA--AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPNQSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQI 194
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20 Identity = 65/196 (33.16%), Postives = 107/196 (54.59%), Query Frame = 3 Query: 132 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLF-KEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 NP++FT K EAI ++A A H Q HL +ALL +P G+ + AG E A + + + + P + + +L +++ +A +K GD ++V+ LIL DS+ G L +E V +++ ++++RG + KV + + ++AL+ YGRDL E A GKLDPVIGRD+E R+ ++I Sbjct: 5 NPNQFTEKAWEAIVRTTDVAKQAQHQQIESEHLFLALLQEP-GLALNILKKAGLE--AAQLQQFTERFIARQPKVSGGNQSVYLGRSLDQLLDQADQFRKDFGDEFISVEHLILSFPRDSRFGRLLSQEFKVDEKQLRQIIQQIRGSQ--KVTDQNPEGKYEALEKYGRDLTEMARRGKLDPVIGRDDEIRRTIQI 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_YERPE (Chaperone protein clpB OS=Yersinia pestis GN=clpB PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 65/197 (32.99%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T K A+A A LA + PLHL ALL+ G + +AG A ++ QA+ +LP ++ S L++V+ + D ++ + +L +LED + D+ K AG VA + +E +RG G KV+ + QALK + DL E+A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRLDRLTSKFQLALADAQSLALGRDNQFIEPLHLMSALLNQDGGTVRPLLTSAGINVARLRSD--IEQALGRLPQVEGTGGDVQPSNELVRVLNLCDKLAQKRSDKFISSELFVLAVLEDRGTLTDMLKAAGATVAIIDKAIETMRG--GDKVDDQGAEDQRQALKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 61/199 (30.65%), Postives = 111/199 (55.78%), Query Frame = 3 Query: 123 VQMNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 +Q D+FT K AI +A +LA H Q HL ++LL + + + + AG + + + +++ P+ APD + + ++ +A+ ++A GD+ ++++ L+L L D++ G L +AGV ++K ++ +RG + KV + + T+++L+ YGRDL A GKLDPVIGRD+E R+ ++I Sbjct: 1 MQPTADQFTEKGWAAIVLAQQLAQQRKHQQLETEHLLLSLLQQ-NALAGRILEKAGV--SIGNLQTAVEAHLQEQPTMQAAPDSVYLGKGVNDLLDQAEKHKQAFGDSFISIEHLLLALAGDNRCGRKLLNQAGVDAGKLKVAIDAVRGNQ--KVTDQNPEGTYESLEKYGRDLSAAAREGKLDPVIGRDDEIRRTIQI 194
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19 Identity = 62/196 (31.63%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 132 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 +P+KFT K EAIA E+A Q HL ALL + +G+ N AG + N + + P + + I +L K++ A+ A+ +GD +++++ L+ +D ++G +L++E G+ ++ ++++RG + KV + + +++L+ YGRDL E A GKLDPVIGRDEE R+ ++I Sbjct: 5 DPNKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALL-EQNGLATSIFNKAGA--SIPRVNDQVNSFIAQQPKLSNPSESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAYGQDDRLGKNLYREIGLTENKLAEIIKQIRGTQ--KVTDQNPEGKYESLEKYGRDLTELAREGKLDPVIGRDEEVRRTIQI 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_RALSO (Chaperone protein clpB OS=Ralstonia solanacearum GN=clpB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 65/197 (32.99%), Postives = 105/197 (53.30%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M DK T + EA+A A LA + PLHL +A+L P G + AG A+ E + A+K+LP Q +++ L +++ + GD +A + +L + +D + G + +E G+A +++ ++ +RG G+ V SA ++ +ALK Y DL EQA GKLDPVIGRD+E R+ ++I Sbjct: 1 MRLDKLTTRFQEALADAQSLALGNDNPYIEPLHLLLAMLRQPDGATKNLLARAGVN--AKGLEIALDNAIKRLP-QVQGGEQVQVGRDLGSLLQATEKEGIKRGDQFIASELFLLAVADDKGEAGRVAREHGLARRALEAAIDAVRG--GQTVGSAEAESQREALKKYTIDLTEQARIGKLDPVIGRDDEIRRAIQI 192 The following BLAST results are available for this feature:
BLAST of FC930453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930453 ID=FC930453; Name=FC930453; organism=Citrus clementina; type=EST; length=712bpback to top |