FC930453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_VIBCH (Chaperone protein clpB OS=Vibrio cholerae GN=clpB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16 Identity = 61/197 (30.96%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+FT K AI+ A LA H P+HL VALL D +G + + + Q + + + +LP + ++ S+ L + + D +++ + +L +ED +G L KE G+ +V +EK+RG G+KV + + QAL+ + DL E+A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALL-DQNGSPIRPLLTMLNVDVMQLRSKL-GEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKGPLGHLLKEFGLTEKKVSEAIEKIRG--GQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16 Identity = 60/198 (30.30%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 132 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 +P KFT + +AI + E+A + H+ +ALL G+ A+ A GE Q E N+ K+ +++ +L ++ RA AA+ + D ++V+ L++G ED ++G + + ++ ++ +RG + KV + + ++AL YGRDL EQA GKLDPVIGRDEE R+ +++ Sbjct: 5 DPTKFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLRQQLEIFTNRQPKQA-----YVEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGFAEDDRVGRKTLRAFNLDPQDLELAIKAIRGSQ--KVTEPNQEEKYEALDKYGRDLTEQARQGKLDPVIGRDEEIRRVIQV 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVY (Chaperone protein clpB OS=Vibrio vulnificus (strain YJ016) GN=clpB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 59/197 (29.95%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+FT K AI+ A LA H P+HL VALL D +G + + + + ++ + +LP + ++ S+ + + + D +++ + +L +ED +G LFKE G+ +V +E++RG G+KV + + QAL+ + DL E+A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALL-DQNGSPIRPLLTILNVDVTHLRSKL-SEMLDRLPKVSGIGGDVQLSSAMGAMFNLCDKIAQKRQDAYISSEIFLLAAIEDRGPLGQLFKELGLTEQKVSQAIEQIRG--GQKVNDQNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 59/197 (29.95%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+FT K AI+ A LA H P+HL VALL D +G + + + + ++ + +LP + ++ S+ + + + D +++ + +L +ED +G LFKE G+ +V +E++RG G+KV + + QAL+ + DL E+A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALL-DQNGSPIRPLLTILNVDVTHLRSKL-SEMLDRLPKVSGIGGDVQLSSAMGAMFNLCDKIAQKRQDAYISSEIFLLAAIEDRGPLGQLFKELGLTEQKVSQAIEQIRG--GQKVNDQNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_PHOLL (Chaperone protein clpB OS=Photorhabdus luminescens subsp. laumondii GN=clpB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 57/197 (28.93%), Postives = 95/197 (48.22%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T+K A+A A A + P+HL +LL G + + G + S + A+++LP ++ S L++ + + GD ++ + +L LE+ + D+ K G ++ +E++RG G KV+ + QALK Y DL E+A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRLDRLTNKFQLALADAQSFALGHDNQFIEPIHLMSSLLKQEGGSIRPLLTSIGIDAGRFSNQ--LELALERLPRVQGIGGDVQPSNDLVRHLNLCDKLAQKAGDNFISSELFVLAALEERGTLSDILKAVGATKEKITKAIEQMRG--GEKVDDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_HAEIN (Chaperone protein clpB OS=Haemophilus influenzae GN=clpB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 60/197 (30.46%), Postives = 97/197 (49.24%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MN +KFT K EA++ LA + P+HL ALL+ G A I A G N A + + + KLP ++ S LI ++ + + D ++ + + LE+ I D+ K+ G ++ ++ +RG G+ V + + + QAL+ Y DL +A GKLDPVIGRDEE R+ +++ Sbjct: 1 MNIEKFTTKFQEALSERQSLAIGKDNQFIEPVHLLTALLNQQGGSIA-PILTASGVNVALLRNELKTE-LNKLPQVIGNGGDVQLSRQLINLLNLCDKFAQQNQDKFISSELFLFAALEERGTISDILKKCGAKKEQISQAIQHIRG--GQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_BDEBA (Chaperone protein clpB OS=Bdellovibrio bacteriovorus GN=clpB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 57/192 (29.69%), Postives = 95/192 (49.48%), Query Frame = 3 Query: 147 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 T K+ EA+ A LA P HL + L+ GI + ++ A AE + K P T ++ AS L K+ + A+ + GD++++ + + +L+ DS++ LFK+ V ++ + ++RGK+ KV + ++ L Y RDL A GKLDPV+GRDEE R+ V++ Sbjct: 2 TRKSQEAMQAAARLAERKSSPSVEPEHLLMELVQQTEGIVPRILDKLNVPQAQFLAE--LRTKIDKFPQVTGGGQKMFASPRLEKIFQAAETEAQEWGDSYISTEHFFMAMLKGGDSELNGLFKKNKVTAEAARTALTEIRGKQ--KVTDDDPENKYEVLNKYARDLTALAAEGKLDPVVGRDEEIRRVVQV 189
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_TREDE (Chaperone protein clpB OS=Treponema denticola GN=clpB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16 Identity = 59/197 (29.95%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MN DK+T K +EA+ A LA H+Q HL LL GI + G + +S ++ + + P T + S L KV A+ D +++ + L+L L E + G+L + G+ + + S ++++RG +V S + ++TF++L+ + RDL + A K+DPVIGRDEE R+ +++ Sbjct: 1 MNIDKYTVKASEAVQEASSLAQRDDHSQVESEHLLYVLLEQEDGIVPPLVEKIG--VSPESLLDDLDKMLDRKPRVTGQSAQTYISPLLAKVFANAEGYADKLKDEYVSTEHLLLALSESKDETGELLRSRGINLKNLLSALKEIRG--NNRVTSENPESTFRSLEKFCRDLTQLAKNEKIDPVIGRDEEIRRVMQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_THET2 (Chaperone protein clpB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16 Identity = 64/197 (32.49%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MN +++T EA+A A LA H HL LL D G+ + + AG + A + + + + +LP A ++ L + RA+A + D ++AVD L+L L E + G+ + +K +++LRG GR V++ ++T+ AL+ YG DL A GKLDPVIGRDEE R+ ++I Sbjct: 1 MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDEGGLAWRLLEKAGADPKA--LKELQERELSRLPKVEGAEVGQYLTSRLSGALNRAEALMEELKDRYVAVDTLVLALAEATP--------GLPGLEALKGALKELRG--GRTVQTEHAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQI 185
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_MYCLE (Chaperone protein clpB OS=Mycobacterium leprae GN=clpB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16 Identity = 60/191 (31.41%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 147 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 T K A+ A + A+SAG+ + P+HL +A+L GI A + G E E + +++LP + + S + I AQ D +++ + L+LGL + DS + L G + ++ K+RG +V S+ + T+QAL+ Y DL Q+ GKLDPVIGRD E R+ V++ Sbjct: 7 TTKMQVALTSALQAASSAGNPEIRPVHLLLAMLMQNDGIAAPLLETVGVEPDIVRNEA--QRLLERLPQASGCSSQPQLSRESLAAITTAQQLATEMDDEYVSTEHLMLGLAMGDSDVAKLLTGHGASPQVLREAFVKIRG--SARVTSSDPEFTYQALEKYSTDLTAQSGEGKLDPVIGRDNEIRRVVQV 193 The following BLAST results are available for this feature:
BLAST of FC930453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930453 ID=FC930453; Name=FC930453; organism=Citrus clementina; type=EST; length=712bpback to top |