FC930453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_LISIN (Chaperone protein clpB OS=Listeria innocua GN=clpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16 Identity = 61/200 (30.50%), Postives = 107/200 (53.50%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEENRKGVRI 710 M+ KFT + + IA A LA ++ H + +H+ LL++ FA+ + N ++ + V +++++K+P S + S L +++R A+ QK D ++ + LIL +++ I K+ + ++ + K+RG G+KV S + + ++AL YGRDLV + +GKLDPVIGRD E R +RI Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVIHVFKVLLTESD--FAKRAYDVAEVNV-EALQKVVDESLRKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVMDQKSNPITVELKKQNKSKKQINEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVRSGKLDPVIGRDAEIRNVIRI 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_BACC1 (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 10987) GN=clpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16 Identity = 65/202 (32.18%), Postives = 104/202 (51.49%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENAAQSAEPVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEENRKGVRI 710 M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV + AGK+DPVIGRD E R+ +RI Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAEGL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRI 196
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_STRCO (Chaperone protein clpB OS=Streptomyces coelicolor GN=clpB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.012e-16 Identity = 60/195 (30.77%), Postives = 100/195 (51.28%), Query Frame = 3 Query: 141 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLS--DPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 + T+++ +AI A A + G+A TP HL +ALL D I A ++ + + T AP + S ++ V+ AQA K GD +L+ + L+LG+ + G++ + G + +++ K RG GR+V +A + ++AL+ +G DL A GKLDPVIGRD+E R+ V++ Sbjct: 4 ELTNRSRDAINAASNRAVTEGNADLTPAHLLLALLQGQDNENITDLLAAVEADLAAVRTGAERIVAGLPSVTGSTVAPPQ--PSREMLAVVADAQARAKELGDEYLSTEHLLLGIAAKGGAAGEVLEGQGASAKKLQEAFRKARG--GRRVTTADPEGQYKALEKFGTDLTAAARDGKLDPVIGRDQEIRRVVQV 194
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMA (Chaperone protein clpB OS=Neisseria meningitidis serogroup A GN=clpB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.012e-16 Identity = 62/197 (31.47%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQI-GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M DK T K +A+A A LA +A + + ALL D + A + +AG N Q + + Q + LP + +I S L V+ A GD ++A + +L L++ + G + KEAG + + ++ +RG G+ V A+ + ALK Y DL ++A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRYDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNSGAAALLAHAG-VNVPQVKQRL-QQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRGDAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRG--GQNVNDANAEDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_BACAN (Chaperone protein clpB OS=Bacillus anthracis GN=clpB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16 Identity = 64/202 (31.68%), Postives = 102/202 (50.50%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENAAQSAEPVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEENRKGVRI 710 M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E Q E +KK PS T + E + + L +++ RA + D +++V+ ++L E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV + AGK+DPVIGRD E R+ +RI Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGVE----NLIKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAEVKAGKIDPVIGRDSEIRRVIRI 196
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_PHOPR (Chaperone protein clpB OS=Photobacterium profundum GN=clpB PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15 Identity = 56/197 (28.43%), Postives = 94/197 (47.72%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+FT K AI LA H P HL VALL+ + + + + + + LP T E+ S + ++ + D ++ + IL ++D +G L KE G+ A+++ + ++RG G+KV+ + + QAL+ + DL E+A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRLDRFTSKFQMAIFDGQSLALGRDHQYIEPAHLMVALLNQDGSTIRPLLTMLNVDISQLRSR--LGELLDHLPKVTGIGGEVQLSNDMGLLLNMCDKLAQKRKDKFISSELFILAAVDDKGSLGKLLKELGLTAAKIEQAINQVRG--GQKVDDQNAEENRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_HELHP (Chaperone protein clpB OS=Helicobacter hepaticus GN=clpB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15 Identity = 58/187 (31.02%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 138 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDE-IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEE 689 +K T++ E + A LA + + + + H+ ALLS+ + QA+N + A + + KLP + E + S L + AQ +GD+ +AVD ++ L++S +FK V +A K + LRG+ K+ES SGD ++L +G DL ++A LDPVIGRD+E Sbjct: 5 EKLTNQMKETLDSAASLALHSSNQEISLAHIYWALLSNHQSVLNQALNKMNIDKTALELQA--RSEVDKLPKSSQVQKENLSISKELSSALNLAQGEAIKNGDSFIAVDMFLIANLKESTFVAIFKPL-VDIAEFKKTLLSLRGES--KIESQSGDDNLESLSKFGIDLTQKALENTLDPVIGRDDE 186
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_THET8 (Chaperone protein clpB OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15 Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MN +++T EA+A A LA H HL LL D + + + AG + A + + + + +LP A ++ L + RA+A + D ++AVD L+L L E + G+ + +K +++LRG GR V++ ++T+ AL+ YG DL A GKLDPVIGRDEE R+ ++I Sbjct: 1 MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDERSLAWRLLEKAGADPKA--LKELQERELARLPKVEGAEVGQYLTSRLSGALNRAEALMEELKDRYVAVDTLVLALAEATP--------GLPGLEALKGALKELRG--GRTVQTEHAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQI 185
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_PSEPK (Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15 Identity = 58/197 (29.44%), Postives = 96/197 (48.73%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T K AI+ A LA H P+HL ALL G + G + + + +LP ++ S L +++ +A + GD ++ + ++L + E+S++G L GV+ +++ + LRG G V A+ + + QAL Y DL ++A GKLDPVIGRD+E R+ V++ Sbjct: 1 MRIDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFD--INGLRQGLVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLGKLLLSQGVSKKALENAINNLRG--GAAVNDANAEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMB (Chaperone protein clpB OS=Neisseria meningitidis serogroup B GN=clpB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 61/197 (30.96%), Postives = 98/197 (49.75%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQI-GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M DK T K +A+A A LA +A + + ALL D + A + +AG N Q + + Q + LP + +I S L V+ A D ++A + +L L++ + G + KEAG + + ++ +RG G+ V A+ + ALK Y DL ++A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNSGAAALLAHAG-VNVPQVKQRL-QQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRSDAYIASELFLLALVQQNDATGKILKEAGATEQNINAAIDAVRG--GQNVNDANAEDQRDALKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQV 193 The following BLAST results are available for this feature:
BLAST of FC930453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930453 ID=FC930453; Name=FC930453; organism=Citrus clementina; type=EST; length=712bpback to top |