FC930453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_LISMO (Chaperone protein clpB OS=Listeria monocytogenes GN=clpB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15 Identity = 61/200 (30.50%), Postives = 103/200 (51.50%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEENRKGVRI 710 M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E + + V ++K+P S + S L +++R A+ Q+ D ++ + LIL +++ I K A ++K + K+RG G++V S + + ++AL YGRDLV + +GKLDPVIGRD E R +RI Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDTDALQKVIENTLEKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQQQLEDDFVSTEHLILAVMDQKSNPITAELKNQHKAKKQIKEAILKIRG--GKRVTSQNAEENYEALTKYGRDLVAEVRSGKLDPVIGRDAEIRNVIRI 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_CHLPN (Chaperone protein clpB OS=Chlamydia pneumoniae GN=clpB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15 Identity = 57/195 (29.23%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 138 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 +KF+ +EA+ A ELA S+ H T HL +ALL + +F I + G + A+ + P+ + S L ++R A+ K GD +++ D L+L ++ + V+ +K+ + K+R G +++S S ++ FQ L+ Y ++L A GKLDPVIGRDEE R+ +++ Sbjct: 2 EKFSDAVSEALEKAFELAKSSKHTYVTENHLLLALLENTESLFYLVIKDIHGNPGLLNT--AVKDALSREPTVVEGEVDPKPSPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEPFNSWKQTTKVSFKDLKNLITKIR--RGNRMDSPSAESNFQGLEKYCKNLTALAREGKLDPVIGRDEEIRRTIQV 192
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 52/200 (26.00%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAGKLDPVIGRDEENRKGVRI 710 MN DK T + +++ A+E+A + Q +HL AL++ G+ G ++ + V M K+ + + A+ + +V+ +A+ K D++++V+ ++L +++ + +G++ ++ + + ++RG + +V+S + T++AL YG +L+E + KLDPVIGRDEE R+ VRI Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVNIDSLKRDIHVQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAMIDIDKNGAVGEILRKNNITKDGFLKVLNEVRGSQ--RVDSQDPEGTYEALDKYGTNLIELVKQHKLDPVIGRDEEIRRAVRI 198
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15 Identity = 57/197 (28.93%), Postives = 98/197 (49.75%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T K A++ A LA H P+HL ALL G + G + AA + N+ + LP ++ S L +++ +A + GD ++ + ++L + E++++G L GV+ +++ V LRG G V + + + QAL Y D+ ++A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRIDRLTSKLQLALSDAQSLAVGHDHPAIEPVHLLSALLEQQGGSIKPLLMQVGFDIAALRSG--LNKELDALPKIQSPTGDVNLSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENTRLGKLLLGQGVSRKALENAVANLRG--GEAVNDPNVEESRQALDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_CLOAB (Chaperone protein clpB OS=Clostridium acetobutylicum GN=clpB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15 Identity = 56/200 (28.00%), Postives = 99/200 (49.50%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL--LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M+ DK T K +AI +A H Q +HL +A++S G+ + G E + E ++ M K+ + I A+ +V R + + D +++V+ ++L L ++ I + + ++ + ++RG + +V+++ + T+ AL YGRDLV+ A KLDPVIGRDEE R+ +RI Sbjct: 1 MDVDKLTLKVQQAINDCQTIAVRYNHQQIDTIHLFMAIISQEDGLIPNILGKMGADVETVKRDTEAELDR-MPKVLGEGAQNASIYATRRFEEVFVRGEKISRDFKDLYISVEHVMLALMDIDSGAIKSILDKNNISKKEFLKALREVRGNQ--RVDTSDPEGTYDALNKYGRDLVKDAKKHKLDPVIGRDEEIRRVIRI 197
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB1_STRAW (Chaperone protein clpB 1 OS=Streptomyces avermitilis GN=clpB1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15 Identity = 59/195 (30.26%), Postives = 97/195 (49.74%), Query Frame = 3 Query: 141 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG-IFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 + T+++ +AI A A S GH TP HL +ALL + + AA A + + KLPS T + P + L+ V+ A + GD L+ + L++G+ + GD+ + G + ++ +K RG GR+V + + ++AL+ +G D A GKLDPVIGRD+E R+ V++ Sbjct: 4 ELTNRSRDAINAATNRAVSEGHPDLTPAHLLLALLGGKDNENITDLLAAVDADQAAVRAGT--ERVLAKLPSVTGSTVAPPQPNRELLAVVADASQRAQDLGDDFLSTEHLLIGIAANGGAAGDVLSQQGASAKKLLEAFQKTRG--GRRVTTPDPEGQYKALEKFGTDFTAAARDGKLDPVIGRDQEIRRVVQV 194
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_LISMF (Chaperone protein clpB OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 61/200 (30.50%), Postives = 103/200 (51.50%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEENRKGVRI 710 M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E + + A+ K+P S + S L +++R A+ QK D ++ + LIL +++ I K+ + +++ + K+RG G+KV S + + ++AL YGRDLV + +GKLDPVIGRD E R +RI Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDIDALQKTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVMDQKSNPITMNLKKQHKSKKQIQEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVRSGKLDPVIGRDAEIRNVIRI 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_FUSNN (Chaperone protein clpB OS=Fusobacterium nucleatum subsp. nucleatum GN=clpB PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 53/201 (26.37%), Postives = 102/201 (50.75%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTP-----APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MNP++FT T AI +A +++ P LA+ LL +G+ + I G + + + ++ K++ + + + I ++ RA+ D+ L+V+ + ++E+ I FK G+++ + + +RG RKV++ + + T++ L+ Y +DLVE A GK+DP+IGRD E R+ ++I Sbjct: 1 MNPNQFTENTISAINLAVDISKGNMQQSIKPEALALGLLMQNNGLIPRVIEKMG-----LNLQYIISELEKEMNNYPKVEVKVSNENISLDQKTNSILNRAEKIMNEMEDSFLSVEHIFKAMIEEMPI---FKRFGISLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELAREGKIDPIIGRDSEIRRAIQI 191
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_COREF (Chaperone protein clpB OS=Corynebacterium efficiens GN=clpB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 58/195 (29.74%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 147 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTL----IKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 T KT+EA+ A + A++ G+ P HL VA+L G+ A + AG + + + +A K + A A+ + + +Q GD +++ + L+ G+ S DL K G +K+ + +RG + KV S + FQAL+ Y DL + A GK+DPVIGRD+E R+ V++ Sbjct: 7 TTKTSEAMQAALQQASANGNPDIRPAHLLVAILDQADGVAAPVLTAAGVD-----PKTILAEAQKLVDGYPKASGSNLANPNFNRDALNALTASQELAGELGDEYVSTEVLLAGIARGKSDAADLLKGKGATYDAIKAAFQSVRGSQ--KVTSQDPEGQFQALEKYSTDLTKLAREGKIDPVIGRDQEIRRVVQV 194
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 61/197 (30.96%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MN + FT K+ EA+ A L S G P H+ ++ + I G N Q A V Q ++ LP + + + +V+++A K GD ++++ ++L LL S + + K+AG+ +++ + +LR +G KV S S + +Q+L+ Y +L E A GKLDPVIGRDEE R+ ++I Sbjct: 1 MNFNNFTIKSQEAVQEAVNLVQSRGQQAIEPAHILHGVMKVGENV-TNFIFQKLGMNGQQVALVVDKQ-IESLPKVSGGEPYLSRESN--EVLQKATQYSKEMGDEFVSLEHILLALLTVKSTVSTILKDAGMTEKELRNAINELR--KGEKVTSQSSEDNYQSLEKYAINLNEAARSGKLDPVIGRDEEIRRVLQI 191 The following BLAST results are available for this feature:
BLAST of FC930453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930453 ID=FC930453; Name=FC930453; organism=Citrus clementina; type=EST; length=712bpback to top |