FC930473

Overview
NameFC930473
Unique NameFC930473
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930473 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.665e-44
Identity = 95/229 (41.48%), Postives = 137/229 (59.83%), Query Frame = 3 
Query:   15 GVIIMQGDVLNHESLVKAIKQ--VDVVISTVGHTLIADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKANIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKNFYIQPPGNIYSFNDLVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQPNFRLN 695
            G  ++ G + + E + K +K+  +DVVIS VG   + DQ+ ++ AIK    +KRF PSEFG+DVDR    VEP  + Y  K  +RRAVE  GIP+T +       +   +   P    PP D+  I+GDGN KA F   +DIG +T+K +DD RTLNKN + +P  N YS N+L SLWE+KIG+TL +  V+ ++LL +  E   P +++ S  H  F+ G Q NF ++
Sbjct:   63 GAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTD-PVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNFSID 290
The following BLAST results are available for this feature:
BLAST of FC930473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN3.665e-4441.48Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionC34007H10EF PostHarvC1 Citrus clementina cDNA clone C34007H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930473 ID=FC930473; Name=FC930473; organism=Citrus clementina; type=EST; length=736bp
GAATTTTTGTGGGTGGTGTTATTATTATGCAGGGAGATGTTTTGAATCAC
GAGAGTTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGATATCAACAGT
TGGTCACACTTTAATAGCCGATCAGGTCAAGATTATTGCTGCCATTAAAG
AAGCCGGTAACGTTAAGAGATTCTTCCCATCGGAATTTGGAAATGATGTT
GATCGAGTCCATGGCGCCGTGGAGCCAACAAAATCGACGTATGACGTAAA
GGCGAACATCCGCCGAGCCGTTGAGGCAGAAGGCATTCCGTACACGTACG
TAGAATCTTATTTTTTTGATGGCTACTTCCTCCCTAATTTGTTGCAGCCT
GGGGCCACTGCCCCCCCTAGGGATAAGGTTGTCATCTTCGGCGATGGAAA
TCCAAAAGCTGTTTTTAACAAGGAAGATGATATTGGAACCTACACTATCA
AAGCGGTTGATGATCCGAGAACCTTGAACAAAAACTTTTACATTCAGCCT
CCCGGTAATATTTACTCATTCAATGATCTTGTGTCTCTGTGGGAGAGAAA
GATTGGTAAAACCCTCGAAAAGGAGTATGTTTCAGAGGAGCAGCTCCTAA
AGAATATTCAAGAAGCTGCACCTCCACACAATGTGATATTATCAATTTAT
CACTCTGCTTTCGTGAAGGGAGTTCAACCAAACTTCAGATTGAACCATCT
TTTGGAGTTGAAGCCTCGCAGCTTTATCCTGATGTC
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