FC930476

Overview
NameFC930476
Unique NameFC930476
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 73/242 (30.17%), Postives = 112/242 (46.28%), Query Frame = 3
Query:    3 LVNHGIQPEFMDTVERLTKAHYRKCMEQRFKELVA----SRALEGIQTEVNDMDWESTFYVRHL-----PQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPAL 695
            +VNHGI  E +  ++ + +  +   +    KE VA    S+ +EG  T++         +V HL     P S +N    P    EYR+V                             LK+   G     +  K++ YPPCP+PDL  G+ AHTD  GI LL  ++ V GLQ+ KD  W D   +  +++V++GDQI  ++NG+YK+V HR     + + R S   F  P  + ++ P P L
Sbjct:   72 VVNHGIPTELIRRLQDVGRKFFE--LPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGL-GGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNE-VPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKE-KTRMSWPVFLEPPREKIVGPLPEL 308          
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19
Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 3
Query:  372 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYP 683
            V+ YP CP+P+L  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG++K+ +H+ +  ++   R S+A+F NP  +A +YP
Sbjct:  200 VNYYPKCPQPNLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN-SSRMSIATFQNPAPNATVYP 303          
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = 3
Query:  372 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD--GQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYP 683
            V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD    ++NG++K+ +H+ +  ++   R S+A+F NP  +A +YP
Sbjct:  198 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAPEATVYP 301          
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19
Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 3
Query:  381 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFY 653
            YPPCP+P+L  G   HTD G + +L QDD + GLQ+L    W+DVPP   S+VVN+GD +++++N KY SVEHR IS   G  R S+  F+
Sbjct:  221 YPPCPQPELTMGTIQHTDIGFVTILLQDD-MGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVG-SRMSITCFF 309          
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19
Identity = 45/106 (42.45%), Postives = 68/106 (64.15%), Query Frame = 3
Query:  372 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYP 683
            ++ YP CP+PDL  G+R HTD G I +L Q D V GLQ  +DG   WI V P+  + VVNLGD    ++NG++++ +H+ +  +    R S+A+F NP  +A++YP
Sbjct:  200 INYYPTCPQPDLTLGVRRHTDPGTITILLQ-DMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNST-SSRLSIATFQNPAQNAIVYP 303          
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19
Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 3
Query:  381 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYN 656
            YPPCP+PDL  GL  H+D   + +L QD  + GLQ+L D  W+DVPP+  ++VVN+GD +++ITN K+ SVEHRV++   G  R S+A F++
Sbjct:  223 YPPCPQPDLTLGLTKHSDNSFLTILLQDH-IGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGP-RISVACFFS 312          
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 3
Query:  372 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGE-GRTSLASFYNPGSDAVIYP 683
            V+ YP CP+PDL  GL+ HTD G I LL Q D V GLQ  +DG   WI V P+  + VVNLGD    ++NG++K+ +H+ +   +GE  R S+A+F NP  DA ++P
Sbjct:  202 VNFYPRCPQPDLTLGLKRHTDPGTITLLLQ-DLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAV--VNGESSRLSIATFQNPAPDARVWP 305          
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 62/234 (26.50%), Postives = 110/234 (47.01%), Query Frame = 3
Query:    3 LVNHGIQPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQST--INEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVI 677
            LVNHGI  E ++ V+   +  + + +E++ K     A+  ++G  +++       ++WE  F+    P+    ++  P    +Y                              G L+K   G        K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  +GQW+    + +SI++++GD IE+++NGKYKS+ HR +   + + R S A F  P  + +I
Sbjct:   86 LVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVNKE-KVRFSWAIFCEPPKEKII 317          
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 63/237 (26.58%), Postives = 108/237 (45.57%), Query Frame = 3
Query:    3 LVNHGIQPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPA 686
            LVNHGI  + ++ V+   +  +   ME++ K     AS  + G  +++       ++WE  F+    P+   +    P    +Y                              G L+K   G        K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  +G+W+    + +SI++++GD IE+++NGKYKS+ HR +   + + R S A F  P  + +I  A
Sbjct:   88 LVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKEKIILKA 322          
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 61/242 (25.21%), Postives = 113/242 (46.69%), Query Frame = 3
Query:    3 LVNHGIQPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQST--INEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIY-PAPALL 698
            L+NHGI  + M+ V++  +  +   +E++ K     A+  ++G  +++       ++WE  F+    P+    ++  P    +Y +                              L+K   G        K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  +G+W+    +  SIV+++GD +E+++NGKYKS+ HR +   + + R S A F  P  D ++  P P ++
Sbjct:   82 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKDKIVLKPLPEMV 321          
The following BLAST results are available for this feature:
BLAST of FC930476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
FLS1_ARATH2.199e-1930.17Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FL3H_PETCR4.899e-1944.34Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_MATIN4.899e-1944.34Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
ACCH3_SOLLC4.899e-1949.451-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FNSI_PETCR6.398e-1942.45Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
ACCH1_ARATH6.398e-1948.911-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_HORVU1.425e-1846.73Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
LDOX_PETHY3.176e-1826.50Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_VITVI4.147e-1826.58Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
LDOX_ARATH4.147e-1825.21Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC34008A01EF PostHarvC1 Citrus clementina cDNA clone C34008A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930476 ID=FC930476; Name=FC930476; organism=Citrus clementina; type=EST; length=698bp
AGCTGGTGAATCATGGAATTCAGCCGGAGTTTATGGACACAGTGGAGAGA
TTGACCAAGGCGCATTACAGAAAATGTATGGAGCAAAGATTCAAGGAGCT
TGTTGCAAGCAGGGCACTTGAAGGTATCCAAACCGAGGTCAATGACATGG
ACTGGGAAAGCACTTTCTATGTGCGTCACCTCCCTCAGTCGACCATCAAT
GAAGTCCCAGATCTTGATGAGGAATACAGGAAGGTGATGAAGGAATTTGC
ATTGAAATTGGAGAAATTAGCAGAGGAGCTATTGGACTTGTTATGCGAGA
ATCTTGGATTAGAGAAGGGGTACTTGAAAAAGGTCTTTCATGGGGCAAAC
GGACCAACCTTTGGTACCAAAGTTAGCAACTACCCACCATGCCCCAAGCC
AGATTTGATCAAGGGTCTCCGGGCTCACACCGACGCCGGCGGCATCATCT
TGCTCTTCCAGGATGACAAAGTCAGTGGCCTTCAGCTTCTTAAAGATGGC
CAGTGGATTGATGTGCCCCCATTGCGCCACTCCATTGTTGTCAACCTCGG
TGACCAAATTGAGGTGATCACCAATGGAAAGTACAAGAGTGTGGAGCACA
GAGTGATTTCTCAAACCGACGGCGAGGGCCGGACGTCCCTAGCTTCATTC
TACAATCCTGGAAGTGATGCTGTGATCTATCCAGCACCAGCATTGCTT
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