FC930482
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17 Identity = 64/202 (31.68%), Postives = 94/202 (46.53%), Query Frame = 3 Query: 126 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWV 731 L+ +AE I T +FAG GS +A NK+ + P ISG H NPAVT + G + LY IAQL+GS +A L + + + F ++ EI+++F L++ + A D + ++G +A IA+G + N+ G GASMNPA S GPA+V + WVY V Sbjct: 42 LQKLIAEAIGTYFVIFAGCGS-VAVNKI-YGSVTFPGICVTWGLIVMVMVYTVGY----ISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFGTVPVGSNGQSLAIEIIISFLLMFVISGVATDDR--AIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKHVYTGLWVYVV 235
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 52/144 (36.11%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 300 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWV 731 +ISG H NPAVT G + Y +AQ+LG+T+A L+ + G+ ++V EI+ TF L++ + A D + ++G +A +A+G + N+L G GASMNPA S GPALVS + + WVY V Sbjct: 96 HISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLMFGGRHEHFPGTLPTGSEVQSLVIEIITTFYLMFVISGVATDNR--AIGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGEYTSIWVYVV 237
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.457e-16 Identity = 59/196 (30.10%), Postives = 87/196 (44.39%), Query Frame = 3 Query: 138 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVY 725 +AE + T +FAG + +A NK T P +ISG H+NPAVT G R Y AQ+ GS A L+ + G F + ++ E ++TF L++ V A D + ++G +A +A+G V N+L G GASMNPA + GPA++ + WVY Sbjct: 57 IAEILGTFFLIFAG-CAAVAVNKRTGGTVTFPGICITWGLAVMVMVYSVG----HISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAGSDVQSLAMEFIITFYLMFVVSGVATDNR--AIGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGRYTGIWVY 245
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.208e-16 Identity = 66/214 (30.84%), Postives = 100/214 (46.73%), Query Frame = 3 Query: 129 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKK----GSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWV 731 R +AEF++T +F++ + M +K T A + GH+NPAVTFG F+ +SL R + Y I Q LG+ ++K ++ NG + A G + + EIV TF LVYTV+ +A D K+ + +AP+ IGF V LA G +NPA S G A++ +W +HW++WV Sbjct: 54 RPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS---GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVA--PGYTKGDGLGAEIVGTFILVYTVF-SATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWV 261
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.190e-16 Identity = 53/144 (36.81%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 300 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWV 731 +ISG H NPAVT V + LY AQL GS +A L L+ + N + F + + A+V EI+++F L++ + A D + + G +A IA+G + N+ G GASMNPA S GPA+V + WVY V Sbjct: 95 HISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSR--ATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIV 236
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.148e-16 Identity = 63/206 (30.58%), Postives = 92/206 (44.66%), Query Frame = 3 Query: 129 RAALAEFISTLIFVF--AGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYW 728 R+ ++E +++ ++VF G +G+ GA+ S +ISG H+NPAVT V +IS +R +Y AQ G LL VT G +A + S+ + AW E ++TF LV Y + DP K +G A +IG A + +NPA S GP+ V WD+HWVYW Sbjct: 66 RSIISECLASFMYVFIVCGAAAGVGV------GASVSSVLLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTF-LVVLCYFVSTDPMKKFMGNSAA-SIGCAYSACCFVSMPY----LNPARSLGPSFVLNKWDSHWVYW 259
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15 Identity = 67/210 (31.90%), Postives = 95/210 (45.24%), Query Frame = 3 Query: 126 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKF-------VTNGQTTSAFALSSGVGA-WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWV 731 L+ +AEF+ T VF G S + N N P +ISG H+NPAVT G L + Y I+Q++GST+A L+ V +G+ F SS VG+ A E ++TF L++ + A D + ++G +A +AIG V N+L ASMNP S GPALV + W+Y V Sbjct: 54 LQKLIAEFLGTYFLVFTGCAS-VVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLG----HISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKH-DVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNR--AIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYGCYKGIWIYLV 255
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15 Identity = 61/198 (30.81%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 138 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWV 731 +AE I T VF+G G+ + + G T +ISG H NPAVT + + LY AQ GS +A L L+ + + F + A+V EI+++F L++ + A D + ++G +A IA+G + N+ G GASMNPA S GPALV + + WVY V Sbjct: 46 IAEMIGTYFIVFSG--CGVVVVNVLYGGTIT---FPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFGTTPADSPARALVAEIIISFLLMFVISGVATDNR--AVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGVYKHIWVYIV 236
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 63/195 (32.31%), Postives = 89/195 (45.64%), Query Frame = 3 Query: 141 AEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVY 725 AEF+ TLI +FAG + + K +GA T +ISG H+NPAVT + +Y AQ++ S A LK V T S VG A E +++F L++ V A A D + ++G +A IA+G V NIL G ASMNP + GPA+ + ++ WVY Sbjct: 84 AEFVGTLILIFAGTATAIVNQKT--DGAET---LIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFE-PTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTR--AVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVY 270
BLAST of FC930482 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 47/144 (32.64%), Postives = 75/144 (52.08%), Query Frame = 3 Query: 300 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWV 731 +ISG H+NPAVT + ++ YW AQ G+ A +LK V + SG W+A++ EIV+TF +++ A A D + ++G +A +A+G V + G G SMNPA + PA+ S + W+Y++ Sbjct: 104 HISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSGPH-WHALLIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFL 244 The following BLAST results are available for this feature:
BLAST of FC930482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930482 ID=FC930482; Name=FC930482; organism=Citrus clementina; type=EST; length=733bpback to top |