FC930492

Overview
NameFC930492
Unique NameFC930492
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX_MAGGR (Alternative oxidase, mitochondrial OS=Magnaporthe grisea GN=AOX1 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.866e-31
Identity = 61/127 (48.03%), Postives = 91/127 (71.65%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI-----ENVPAPAIAIDYWRLPK-DATLKDVITVIRADEAHHRDVNH 365
            I+ LLEEA NERMHL+T +++ +P W  ++L++  QGV+FNA FV YL+SPK+ HR VGYLEEEA+H+YT  +++++ G +          P IA+ YW +P+   T++D++  IRADEA+HR V+H
Sbjct:  185 IETLLEEAYNERMHLLTFLKMCEPGWLMKILIIGAQGVYFNAMFVAYLISPKICHRFVGYLEEEAVHTYTRSIEELERGDLPKWSDPKFQVPEIAVSYWGMPEGHRTMRDLLLYIRADEANHRGVHH 311          
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX_MONFR (Alternative oxidase, mitochondrial OS=Monilinia fructicola GN=AOX1 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.027e-30
Identity = 71/165 (43.03%), Postives = 104/165 (63.03%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI-----ENVPAPAIAIDYWRLPK-DATLKDVITVIRADEAHHRDVNHFASD----------IQFQGKELRDAPA-------PLGY 428
            I+ LLEEA NERMHL+T +++ +P  + R ++L  QGVFFN+FF+ YL SPK  HR VGYLEEEA+ +YT  ++D+++G +      N  AP +AI+YW +P+   +++D++  IRADEA HR+VNH   +          +   GKE+ D P        PLG+
Sbjct:  188 IETLLEEAYNERMHLLTFLKMYEPGLFMRTMILGAQGVFFNSFFLCYLFSPKTCHRFVGYLEEEAVLTYTLSIQDLENGHLPKWADPNFKAPDLAIEYWGMPEGHRSMRDLLYYIRADEAKHREVNHTLGNLKQDEDPNPFVSVYGKEVADKPGKGIESLRPLGW 352          
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX_PICST (Alternative oxidase, mitochondrial OS=Pichia stipitis GN=STO1 PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.904e-30
Identity = 62/130 (47.69%), Postives = 91/130 (70.00%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI---ENVPAPAIAIDYW-RLPKDATLKDVITVIRADEAHHRDVNHFASDI 380
            I+ LL+EA NERMHL+T +++ KP W+ R ++   QGVF N FF+ YL +PK  HR VGYLEEEA+ +YT ++ ++ SG +   EN+  P IA  YW  L +++++ D+I  IRADEA HR+VNH  +++
Sbjct:  188 IETLLDEAFNERMHLLTFIKIGKPSWFTRTIIYVGQGVFCNLFFLFYLANPKYCHRFVGYLEEEAVSTYTHFVHELQSGKLPKFENIKIPTIAWQYWPELTENSSMLDLILRIRADEAKHREVNHTLANL 317          
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX_BLUGR (Alternative oxidase, mitochondrial OS=Blumeria graminis PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.697e-30
Identity = 63/151 (41.72%), Postives = 99/151 (65.56%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPA-----IAIDYWRLPK-DATLKDVITVIRADEAHHRDVNHFASDIQFQG------KELRDAPAP 419
            I+ LLEEA NERMHL+T +++ KP W+ + +++  QGVFFN+ F+ YL+SP+  HR V YLEEEA+ +Y+  ++DI++G +    +P      +A+ YW++P+ + T++D++  IRADEA HR+VNH   ++           E RD  AP
Sbjct:  188 IETLLEEAYNERMHLLTFLKMAKPGWFMKFMIIGAQGVFFNSMFLSYLISPRTCHRFVAYLEEEAVLTYSTAIQDIEAGLLPKWTSPEFRIPDLAVQYWKIPEGNRTMRDLLLYIRADEAKHREVNHTLGNLDQNEDPNPFVSEYRDKAAP 338          
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX1_CANAL (Alternative oxidase 1, mitochondrial OS=Candida albicans GN=AOX1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.305e-29
Identity = 64/150 (42.67%), Postives = 100/150 (66.67%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGS----IENVPAPAIAIDYW-RLPKDATLKDVITVIRADEAHHRDVNH-FASDIQFQGK-----ELRDAPAP 419
            I+ L +EA NERMHL+T +++ KP W+ R ++   QGVF N FF++YL++P+  HR VGYLEEEA+ +YT  + ++D  +     + +P P IA+ YW  L  +++ KD+I  IRADEA HR++NH FA+  Q+Q +     +++D+  P
Sbjct:  209 IETLHDEAYNERMHLLTFIKIGKPSWFTRSIIYIGQGVFTNIFFLVYLMNPRYCHRFVGYLEEEAVRTYTHLIDELDDPNKLPDFQKLPIPNIAVQYWPELTPESSFKDLILRIRADEAKHREINHTFANLEQWQDRNPFALKIKDSDKP 358          
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX_BOTFU (Alternative oxidase, mitochondrial OS=Botryotinia fuckeliana GN=aox PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29
Identity = 60/133 (45.11%), Postives = 96/133 (72.18%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI-----ENVPAPAIAIDYWRLPK-DATLKDVITVIRADEAHHRDVNHFASDIQ 383
            I+ LLEEA NERMHL+T +++ +P  + R ++L  QGVFFN+FF+ YL SP+  HR VGYLEEEA+ +YT  ++D+++G +      +  AP +A++YW +P+ + +++D++  IRADEA HR+VNH   +++
Sbjct:  191 IETLLEEAYNERMHLLTFLKMYEPGIFMRTMILGAQGVFFNSFFLCYLFSPRTCHRFVGYLEEEAVLTYTLSIQDLENGHLPKWADPDFKAPDLAVEYWGMPEGNRSMRDLLYYIRADEAKHREVNHTLGNLK 323          
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX_HANAN (Alternative oxidase, mitochondrial OS=Hansenula anomala GN=AOX1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28
Identity = 61/131 (46.56%), Postives = 91/131 (69.47%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI---ENVPAPAIAIDYWR-LPKDATLKDVITVIRADEAHHRDVNHFASDIQ 383
            I+ LL+EA NERMHL+T +++  P W+ R ++   QGVF N FF++YL+ P+  HR VGYLEEEA+ +YT  +KDIDS  +   ++V  P I+  YW  L + +T +D+I  IRADE+ HR+VNH  ++++
Sbjct:  171 IETLLDEAYNERMHLLTFIKIGNPSWFTRFIIYMGQGVFANLFFLVYLIKPRYCHRFVGYLEEEAVSTYTHLIKDIDSKRLPKFDDVNLPEISWLYWTDLNEKSTFRDLIQRIRADESKHREVNHTLANLE 301          
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX2_CANAL (Alternative oxidase 2, mitochondrial OS=Candida albicans GN=AOX2 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 60/132 (45.45%), Postives = 89/132 (67.42%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDI----DSGSIENVPAPAIAIDYW-RLPKDATLKDVITVIRADEAHHRDVNHFASDIQ 383
            I+ LL+EA NERMHL+T +++ KP W+ R ++   QGVF N FF+LYLL+P+  HR VGYLEEEA+ +Y+  L ++       + E +  P +A+ YW  L   ++ KD+I  IRADEA HR+VNH  ++++
Sbjct:  195 IETLLDEAYNERMHLLTFIKIGKPSWFTRSIIYVGQGVFTNVFFLLYLLNPRYCHRFVGYLEEEAVRTYSHLLDELAVPGKLPAFETMKIPEVAVQYWPELTPKSSFKDLILRIRADEAKHREVNHTFANLE 326          
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX_YARLI (Alternative oxidase, mitochondrial OS=Yarrowia lipolytica GN=AOX PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27
Identity = 61/124 (49.19%), Postives = 85/124 (68.55%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSG---SIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNH 365
            I++L+EEA NERMHL+T ++L KP    R  +L  Q +F+N FF+ YL+SP   HR VGYLEEEA+ +YT  L+DID+G    + ++  P IA  YW +  D T++D+I  +RADEA H +VNH
Sbjct:  186 IESLVEEAYNERMHLLTFLKLQKPSVQMRTGLLIGQIIFYNLFFISYLISPATCHRFVGYLEEEAVITYTRCLEDIDAGRLPELASMEVPDIARTYWHMEDDCTMRDLIQYVRADEAKHCEVNH 309          
BLAST of FC930492 vs. ExPASy Swiss-Prot
Match: AOX_TRYBB (Alternative oxidase, mitochondrial OS=Trypanosoma brucei brucei GN=AOX PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.535e-26
Identity = 61/128 (47.66%), Postives = 82/128 (64.06%), Query Frame = 3
Query:    3 IKALLEEAENERMHLMTMVELVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSIENV--PAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFASDI 380
            I  LL EAENERMHLMT +EL +P    R+ ++  Q + +    V Y++SP+  HR VGYLEEEA+ +YT  ++ ID G +       P +A  YW L K+AT +D+I VIRADEA HR VNH  +D+
Sbjct:  152 INTLLVEAENERMHLMTFIELRQPGLPLRVSIIITQAIMYLFLLVAYVISPRFVHRFVGYLEEEAVITYTGVMRAIDEGRLRPTKNDVPEVARVYWNLSKNATFRDLINVIRADEAEHRVVNHTFADM 279          
The following BLAST results are available for this feature:
BLAST of FC930492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
AOX_MAGGR7.866e-3148.03Alternative oxidase, mitochondrial OS=Magnaporthe ... [more]
AOX_MONFR1.027e-3043.03Alternative oxidase, mitochondrial OS=Monilinia fr... [more]
AOX_PICST3.904e-3047.69Alternative oxidase, mitochondrial OS=Pichia stipi... [more]
AOX_BLUGR8.697e-3041.72Alternative oxidase, mitochondrial OS=Blumeria gra... [more]
AOX1_CANAL3.305e-2942.67Alternative oxidase 1, mitochondrial OS=Candida al... [more]
AOX_BOTFU4.316e-2945.11Alternative oxidase, mitochondrial OS=Botryotinia ... [more]
AOX_HANAN1.256e-2846.56Alternative oxidase, mitochondrial OS=Hansenula an... [more]
AOX2_CANAL2.142e-2845.45Alternative oxidase 2, mitochondrial OS=Candida al... [more]
AOX_YARLI1.389e-2749.19Alternative oxidase, mitochondrial OS=Yarrowia lip... [more]
AOX_TRYBB1.535e-2647.66Alternative oxidase, mitochondrial OS=Trypanosoma ... [more]

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Properties
Property NameValue
Genbank descriptionC34008B05EF PostHarvC1 Citrus clementina cDNA clone C34008B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930492 ID=FC930492; Name=FC930492; organism=Citrus clementina; type=EST; length=732bp
GGATCAAAGCTCTGCTTGAAGAAGCAGAGAATGAGAGGATGCATCTGATG
ACCATGGTGGAGCTTGTGAAGCCCAAATGGTATGAGAGGATGCTTGTTCT
GACTGTGCAGGGTGTCTTTTTCAATGCATTCTTTGTGCTTTATCTACTCT
CACCTAAACTGGCTCATAGAGTTGTTGGCTACTTGGAGGAGGAGGCTATA
CACTCTTACACTGAATATCTCAAGGATATTGATAGTGGATCTATTGAAAA
TGTTCCAGCCCCTGCTATTGCTATTGACTATTGGAGGTTACCTAAGGATG
CTACACTCAAGGATGTTATTACTGTTATTCGTGCTGACGAAGCTCATCAT
CGGGATGTCAACCATTTTGCTTCTGATATACAGTTTCAGGGGAAGGAATT
AAGAGATGCTCCTGCCCCTCTTGGTTACCACTGAGATGGGATGAATTTGA
GATTGTTTGTCAGATTTGTGGTTGAGGTACTTCTACATGGATTGGTCTGA
GATAATGAGGTTTCTGTATATGCTGAGAATAGTACACTAGGAGTATGAAA
TCTCAAGCTAAATGAAAAAGGGGTATAGAGTTTTCTGTATATGCTGAGAA
TAGTACACTAGGAGTATGAAGTGTCAAGCTAAATGAAAAAGGGGTATAGA
CTAAATAAACACATCTGACTTTCTAAACCCAATTTGGTTGAATTTTATAA
GCTTTGAGATTAGACTGCTTTTGTTTCTGTAT
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