FC930499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_XANCB (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. campestris (strain B100) GN=ubiB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19 Identity = 57/209 (27.27%), Postives = 101/209 (48.33%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAP 629 L VP V W +TA + LTLE V G+ +++ LD G +R +A++ + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + EG+G LDP VA P Sbjct: 227 LYVPEVIWSHTAERALTLERVYGIPSDDVAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERCLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFTR-PLSEISLAEVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPKLDIWAVARP 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_XANC8 (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ubiB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19 Identity = 57/209 (27.27%), Postives = 101/209 (48.33%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAP 629 L VP V W +TA + LTLE V G+ +++ LD G +R +A++ + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + EG+G LDP VA P Sbjct: 227 LYVPEVIWSHTAERALTLERVYGIPSDDVAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFTR-PLSEISLAEVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPKLDIWAVARP 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_XANAC (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas axonopodis pv. citri GN=ubiB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19 Identity = 57/209 (27.27%), Postives = 101/209 (48.33%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAP 629 L VP V W +TA + LTLE V G+ +++ LD G +R +A++ + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + EG+G LDP VA P Sbjct: 227 LYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFNR-PLSEISLAQVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPRLDIWAVARP 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_ACIAC (Probable ubiquinone biosynthesis protein ubiB OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.056e-18 Identity = 52/211 (24.64%), Postives = 103/211 (48.82%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 +R+P + WD+ +VL +E + GV I++++ L G + Q+A + + Q+ + GFFHAD HPGN+ V L+ I DFG++G + F +E L F A + +D K+V + ++ + ++ + +++ + + P ++ +L + LF ++ + + EG+G LDP+ A P+ ++ Sbjct: 224 VRIPEILWDFCHPEVLVMERMKGVPISQIERLRAAGVDIRQLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLEPGSFGRYISLDFGIVGSLTEFDKEYLAQNFTAFFRRDYKRVAELHVESGWVPADTRINELESAIRAVCEPYFDR-PLKEISLGMVLMRLFQTSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWSTAKPFLEK 433
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_DIAST (Probable ubiquinone biosynthesis protein ubiB OS=Diaphorobacter sp. (strain TPSY) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.686e-18 Identity = 55/209 (26.32%), Postives = 101/209 (48.33%), Query Frame = 3 Query: 27 VPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 +P VFWD+ +VL +E + GV IN+++ L G + ++A + + Q+ + GFFHAD HPGN+ V L I DFG++G + F +E L F A + +D K+V + I+ + ++ + +++ + + P ++ +L + LF ++ + + EG+G LDPD A P+ ++ Sbjct: 226 IPEVFWDFCHAEVLVMERMKGVPINQVERLRSAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIVGTLTEFDKEYLAQNFTAFFRRDYKRVAELHIESGWVPAHTRVNELEAAIRTVCEPYFDR-PLKEISLGMVLLRLFQTSRRFQVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWSTAKPFLEK 433
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_ACISJ (Probable ubiquinone biosynthesis protein ubiB OS=Acidovorax sp. (strain JS42) GN=ubiB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.581e-18 Identity = 55/209 (26.32%), Postives = 100/209 (47.85%), Query Frame = 3 Query: 27 VPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 +P VFWD+ +VL +E + GV IN++ L G + ++A + + Q+ + GFFHAD HPGN+ V L I DFG++G + F +E L F A + +D K+V + I+ + ++ + +++ + + P ++ +L + LF ++ + + EG+G LDPD A P+ ++ Sbjct: 226 IPEVFWDFCHAEVLVMERMKGVPINQVDRLRSAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIVGTLTEFDKEYLAQNFTAFFRRDYKRVAELHIESGWVPAHTRVNELEAAIRTVCEPYFDR-PLKEISLGMVLLRLFQTSRRFQVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWSTAKPFLEK 433
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_MARAV (Probable ubiquinone biosynthesis protein ubiB OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18 Identity = 55/217 (25.35%), Postives = 98/217 (45.16%), Query Frame = 3 Query: 3 FRNIKWLRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 F N + +P + WDYT VL +E + G+ I ++ AL+ G N +A + +E + Q+ + FFHAD HPGN+ VD+ D I DFG++G + + L A + +D ++V Q I + P ++ +++ + + + P + + LF A+ + + EG+G L PD A P+ ++ Sbjct: 216 FENSPLIYIPFIDWDYTRKSVLVMERIHGIPIADVPALEKAGVNMRVLAEKGVEIFFTQVFRDSFFHADMHPGNIFVDVSNPADPKYIAIDFGIVGTLAPDDQSYLARNLLAFFRRDYRQVAQLHIQSGWVPPETRVNEFEAAIRTVCEPIF-ERPLKDISFGHFLLRLFQTARRFNMEVQPQLVLLQKTLLNVEGLGRQLYPDLDLWSTAQPFLED 431
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_ENT38 (Probable ubiquinone biosynthesis protein ubiB OS=Enterobacter sp. (strain 638) GN=ubiB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.333e-17 Identity = 53/216 (24.54%), Postives = 101/216 (46.76%), Query Frame = 3 Query: 3 FRNIKWLRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQ 638 F N L VP V+ DY + ++ +E + G+ ++++ AL+ QG N +A R ++ + Q+ + FFHAD HPGN+ V D I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + EG+G L P K A P+ + Sbjct: 220 FENSPMLYVPEVYSDYCSQNMMVMERIYGIPVSDIVALENQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF-EKPLSEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_PHOLL (Probable ubiquinone biosynthesis protein ubiB OS=Photorhabdus luminescens subsp. laumondii GN=ubiB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.741e-17 Identity = 54/217 (24.88%), Postives = 101/217 (46.54%), Query Frame = 3 Query: 3 FRNIKWLRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 F N L VP ++ DY VL +E V G+ +++++AL+ Q N +A R ++ + Q+ + FFHAD HPGN+ V D I D+G++G + + L + F A + +D +KV + +D + ++ +++ + + + P + + + +LF A+ + + EG+G L P K A P+ +E Sbjct: 219 FENSSTLYVPEIYSDYCRENVLVMERVYGIPVSDIEALEAQNTNMRLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPFYIGIDYGIVGSLNKDDKRYLAENFIAFFNRDYRKVAELHVDSGWVPSDTNVEDFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMAVQPQLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFLEE 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP7 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ubiB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17 Identity = 52/216 (24.07%), Postives = 102/216 (47.22%), Query Frame = 3 Query: 3 FRNIKWLRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQ 638 F + L VP V+ DY + ++ +E + G+ +++++AL+ QG N +A R ++ + Q+ + FFHAD HPGN+ V D I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + EG+G L P K A P+ + Sbjct: 220 FEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEALEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434 The following BLAST results are available for this feature:
BLAST of FC930499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930499 ID=FC930499; Name=FC930499; organism=Citrus clementina; type=EST; length=742bpback to top |