FC930499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB8 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS185) GN=ubiB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16 Identity = 48/211 (22.75%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 L VP V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + EG+G L P + A P+ ++ Sbjct: 225 LYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLEQ 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB5 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=ubiB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16 Identity = 48/211 (22.75%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 L VP V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + EG+G L P + A P+ ++ Sbjct: 225 LYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLEQ 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB2 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS223) GN=ubiB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16 Identity = 48/211 (22.75%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 L VP V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + EG+G L P + A P+ ++ Sbjct: 225 LYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLEQ 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_ERWCT (Probable ubiquinone biosynthesis protein ubiB OS=Erwinia carotovora subsp. atroseptica GN=ubiB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16 Identity = 50/216 (23.15%), Postives = 99/216 (45.83%), Query Frame = 3 Query: 3 FRNIKWLRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQ 638 F N L VP ++ DY +L +E + G+ ++++ AL G + +A R ++ + Q+ + FFHAD HPGN+ + D I D G++G + + L + F A + +D +KV + +D + P +++ +++ + + + P + + + +LF A+ + + EG+G L P K A P+ + Sbjct: 220 FENSPMLYVPEIYSDYCRESMLVMERIYGIPVSDVDALKANGTDMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFISYDHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVADFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYIEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_CITK8 (Probable ubiquinone biosynthesis protein ubiB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ubiB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16 Identity = 50/216 (23.15%), Postives = 99/216 (45.83%), Query Frame = 3 Query: 3 FRNIKWLRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQ 638 F N L VP V+ DY + ++ +E + G+ ++++ L+ G N +A R ++ + Q+ + FFHAD HPGN+ V + I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + EG+G L P K A P+ + Sbjct: 220 FENSPMLYVPEVYSDYCSQDMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_SHEDO (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.600e-16 Identity = 49/211 (23.22%), Postives = 101/211 (47.87%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 L VP ++ D + T+++ +E + G+ +++L AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D +++ Q ++ + D+ + ++++ + + ++ P + + + LF A+ + + EG+G L P + A P+ ++ Sbjct: 225 LYVPYIYEDLSFTRLIVMERIYGIAVSDLSALKAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPDNPYYIGLDCGIMGTLTDVDKRYLAENFLAFFNRDYQRIAQLHLESGWVSEHTDIVAFEQAIKIVCEPMFNK-PLAEISFGHVLLALFRTARQFNMVVQPQLVLLQKTLLYIEGLGRQLYPQLDLWQTAKPFLEQ 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_SHESR (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-7) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 47/211 (22.27%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 L +P V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + EG+G L P + A P+ ++ Sbjct: 225 LYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLEQ 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_SHESM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-4) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 47/211 (22.27%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 21 LRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQE 641 L +P V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + EG+G L P + A P+ ++ Sbjct: 225 LYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLEQ 434
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_AZOVD (Probable ubiquinone biosynthesis protein ubiB OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 55/216 (25.46%), Postives = 97/216 (44.91%), Query Frame = 3 Query: 3 FRNIKWLRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQ 638 F L VP ++WD+ KVL +E + GV + +L AL QG + +A R +E + Q+ + FFHAD HPGN+ V D I D G++G + ++ L A +++D +KV Q ID + ++ +++ + + + P + + + LF A+ + + EG+G L P+ A P+ + Sbjct: 221 FEGSPLLYVPQIYWDWCRPKVLVMERIYGVPVTDLAALVDQGTDLKLLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTRQPWDPQYIAIDCGIVGSLTPQDQDYLARNLLAFFKRDYRKVAQLHIDSGWVPADTQVNEFEAAIRTVCEPIF-EKPLKDISFGQLLLRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPELDLWTTAKPFLE 435
BLAST of FC930499 vs. ExPASy Swiss-Prot
Match: UBIB_CELJU (Probable ubiquinone biosynthesis protein ubiB OS=Cellvibrio japonicus (strain Ueda107) GN=ubiB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.552e-16 Identity = 53/216 (24.54%), Postives = 101/216 (46.76%), Query Frame = 3 Query: 3 FRNIKWLRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIASRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTPEGIGNILDPDFSFVKVAAPYAQ 638 F N L VP V+W+YT T VL +E + G+ + +L AL+ Q + ++A R +E + Q+ + FFHAD HPGN+ V + I D ++G + + L A++ +D ++V + ++ + + + +V+ + + + P ++ + A + +LF A+ + + EG+G L PD A P+ + Sbjct: 213 FLNSPLLYVPEVYWEYTRTNVLVMERIYGIPVTDLAALNAQQTDMKKLAERGVEIFFTQVFEHNFFHADMHPGNIFVAHEHPSAPQYIAVDMAIVGSLTRADQYYLARNLLAMFRRDYRQVAELHVESGWVPSHVRVEELEAAVRTVCEPIF-EKPLKEISFAQVLLNLFRTARRFEMEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWATAHPFLE 427 The following BLAST results are available for this feature:
BLAST of FC930499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930499 ID=FC930499; Name=FC930499; organism=Citrus clementina; type=EST; length=742bpback to top |